RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 FAM110DQ8TAY7 271 aaPredicted RBP14.8□□□□□ -0.04
SHANK1-202ENST00000359082 COX11Q9Y6N1 276 aa14.8□□□□□ -0.04
SHANK1-202ENST00000359082 NDUFB8O95169 186 aa14.8□□□□□ -0.04
SHANK1-202ENST00000359082 PRSS57Q6UWY2 283 aa14.8□□□□□ -0.04
SHANK1-202ENST00000359082 TMEM141Q96I45 108 aa14.79□□□□□ -0.04
SHANK1-202ENST00000359082 EREGO14944 169 aa14.79□□□□□ -0.04
SHANK1-202ENST00000359082 Q71RC1 249 aaPredicted RBP14.79□□□□□ -0.04
SHANK1-202ENST00000359082 SRSF8Q9BRL6 282 aaKnown RBP14.79□□□□□ -0.04
SHANK1-202ENST00000359082 GBF1Q92538 1859 aa14.79□□□□□ -0.04
SHANK1-202ENST00000359082 A0A096LPF7 62 aa14.79□□□□□ -0.04
SHANK1-202ENST00000359082 PFN1P07737 140 aaKnown RBP14.79□□□□□ -0.04
SHANK1-202ENST00000359082 TET1Q8NFU7 2136 aa14.78□□□□□ -0.04
SHANK1-202ENST00000359082 NXPH4O95158 308 aa14.78□□□□□ -0.04
SHANK1-202ENST00000359082 CABIN1Q9Y6J0 2220 aa14.78□□□□□ -0.04
SHANK1-202ENST00000359082 G3V318 75 aa14.78□□□□□ -0.04
SHANK1-202ENST00000359082 PRSS46E5RG02 174 aa14.78□□□□□ -0.04
SHANK1-202ENST00000359082 A0A1B0GUS0 222 aa14.77□□□□□ -0.04
SHANK1-202ENST00000359082 NEGR1Q7Z3B1 354 aa14.77□□□□□ -0.04
SHANK1-202ENST00000359082 FNDC10F2Z333 226 aa14.77□□□□□ -0.04
SHANK1-202ENST00000359082 PDE6HQ13956 83 aa14.77□□□□□ -0.04
SHANK1-202ENST00000359082 UBE2E1P51965 193 aa14.76□□□□□ -0.05
SHANK1-202ENST00000359082 ZNRF2Q8NHG8 242 aa14.76□□□□□ -0.05
SHANK1-202ENST00000359082 LYL1P12980 280 aa14.76□□□□□ -0.05
SHANK1-202ENST00000359082 Q8N8P6 123 aa14.76□□□□□ -0.05
SHANK1-202ENST00000359082 IGHG3P01860 377 aa14.76□□□□□ -0.05
SHANK1-202ENST00000359082 C2orf66Q6UXQ4 117 aa14.76□□□□□ -0.05
SHANK1-202ENST00000359082 IGHV1-69DA0A0B4J2H0 117 aa14.75□□□□□ -0.05
SHANK1-202ENST00000359082 IGHV1-69P01742 117 aa14.75□□□□□ -0.05
SHANK1-202ENST00000359082 C9orf153Q5TBE3 101 aa14.75□□□□□ -0.05
SHANK1-202ENST00000359082 A8MWP6 167 aa14.75□□□□□ -0.05
SHANK1-202ENST00000359082 C17orf82Q86X59 251 aaPredicted RBP14.75□□□□□ -0.05
SHANK1-202ENST00000359082 FAM231BA6NCW3 169 aa14.75□□□□□ -0.05
SHANK1-202ENST00000359082 ADCYAP1P18509 176 aa14.75□□□□□ -0.05
SHANK1-202ENST00000359082 CLPSL2Q6UWE3 100 aa14.75□□□□□ -0.05
SHANK1-202ENST00000359082 CYYR1Q96J86 154 aa14.75□□□□□ -0.05
SHANK1-202ENST00000359082 POLR3KQ9Y2Y1 108 aaPredicted RBP14.75□□□□□ -0.05
SHANK1-202ENST00000359082 C8orf86Q6ZUL3 223 aa14.75□□□□□ -0.05
SHANK1-202ENST00000359082 MORN5Q5VZ52 161 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 ZNF492Q9P255 531 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 SBF1O95248 1867 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 CGB7P0DN87 165 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 ANXA2RQ3ZCQ2 193 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 IGHV1OR15-1A0A075B7D0 117 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 TEX36Q5VZQ5 186 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 DUX4L9Q6RFH8 374 aaPredicted RBP14.74□□□□□ -0.05
SHANK1-202ENST00000359082 Q6ZS49 121 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 Q6ZS92 163 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 SCRT2Q9NQ03 307 aa14.74□□□□□ -0.05
SHANK1-202ENST00000359082 MRAPQ8TCY5 172 aa14.73□□□□□ -0.05
SHANK1-202ENST00000359082 ASPHD1Q5U4P2 390 aa14.73□□□□□ -0.05
SHANK1-202ENST00000359082 TMEM243Q9BU79 118 aa14.73□□□□□ -0.05
SHANK1-202ENST00000359082 RSPO3Q9BXY4 272 aaPredicted RBP14.73□□□□□ -0.05
SHANK1-202ENST00000359082 SCN5AQ14524 2016 aa14.73□□□□□ -0.05
SHANK1-202ENST00000359082 MRPL51Q4U2R6 128 aaKnown RBP14.73□□□□□ -0.05
SHANK1-202ENST00000359082 RHODO00212 210 aa14.73□□□□□ -0.05
SHANK1-202ENST00000359082 FAM104BQ5XKR9 115 aa14.73□□□□□ -0.05
SHANK1-202ENST00000359082 NDUFA4L2Q9NRX3 87 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 ZNF833PQ6ZTB9 187 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 TMEM14BQ9NUH8 114 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 MMP23AO75900 390 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 HLA-DRB4P13762 266 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 HLA-DRB4X5D2U9 266 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 CRLF1O75462 422 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 THADAQ6YHU6 1953 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 IGHV2-70DA0A0C4DH43 119 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 MST1LQ2TV78 715 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 FOXL2NBQ6ZUU3 175 aa14.72□□□□□ -0.05
SHANK1-202ENST00000359082 TRBV19A0A075B6N1 114 aa14.71□□□□□ -0.05
SHANK1-202ENST00000359082 IGKV1-6A0A0C4DH72 117 aa14.71□□□□□ -0.05
SHANK1-202ENST00000359082 HAMPP81172 84 aa14.71□□□□□ -0.05
SHANK1-202ENST00000359082 C18orf32Q8TCD1 76 aa14.71□□□□□ -0.05
SHANK1-202ENST00000359082 SVILO95425 2214 aa14.71□□□□□ -0.05
SHANK1-202ENST00000359082 APOC4P55056 127 aa14.71□□□□□ -0.05
SHANK1-202ENST00000359082 RNASE13Q5GAN3 156 aaKnown RBP14.71□□□□□ -0.05
SHANK1-202ENST00000359082 TCTEX1D4Q5JR98 221 aa14.71□□□□□ -0.05
SHANK1-202ENST00000359082 SPANXA1Q9NS26 97 aa14.71□□□□□ -0.05
SHANK1-202ENST00000359082 YPEL3P61236 119 aaPredicted RBP14.71□□□□□ -0.06
SHANK1-202ENST00000359082 KLF5Q13887 457 aaPredicted RBP14.71□□□□□ -0.06
SHANK1-202ENST00000359082 VWC2Q2TAL6 325 aa14.71□□□□□ -0.06
SHANK1-202ENST00000359082 PRSS29PA6NIE9 313 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 HAPLN4Q86UW8 402 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 TRAV12-1A0A0B4J245 112 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 GATA3P23771 443 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 ZNF318Q5VUA4 2279 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 LHBP01229 141 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 Q0VG73 95 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 FAM120AOSQ5T036 256 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 C20orf144Q9BQM9 153 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 CACNA1IQ9P0X4 2223 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 IGF2BP2-AS1Q96M15 143 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 SDHAF1A6NFY7 115 aa14.7□□□□□ -0.06
SHANK1-202ENST00000359082 ATP6V0BQ99437 205 aa14.69□□□□□ -0.06
SHANK1-202ENST00000359082 CITED1Q99966 193 aa14.69□□□□□ -0.06
SHANK1-202ENST00000359082 IGHV1-24A0A0C4DH33 117 aa14.69□□□□□ -0.06
SHANK1-202ENST00000359082 IGKV1-39P01597 117 aa14.69□□□□□ -0.06
SHANK1-202ENST00000359082 IGKV1D-39P04432 117 aa14.69□□□□□ -0.06
SHANK1-202ENST00000359082 DSCR8Q96T75 97 aa14.69□□□□□ -0.06
SHANK1-202ENST00000359082 C17orf58Q2M2W7 97 aa14.68□□□□□ -0.06
SHANK1-202ENST00000359082 CDKN1BP46527 198 aa14.68□□□□□ -0.06
SHANK1-202ENST00000359082 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms