RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 GNB4Q9HAV0 340 aa11.55□□□□□ -0.56
GABPB1-202ENST00000359031 ABCA1O95477 2261 aa11.54□□□□□ -0.56
GABPB1-202ENST00000359031 LINC00587B1AMM8 73 aa11.54□□□□□ -0.56
GABPB1-202ENST00000359031 H3BUA1 57 aa11.54□□□□□ -0.56
GABPB1-202ENST00000359031 M0R3E3 92 aa11.54□□□□□ -0.56
GABPB1-202ENST00000359031 IGF1P05019 195 aa11.54□□□□□ -0.56
GABPB1-202ENST00000359031 SRIP30626 198 aa11.54□□□□□ -0.56
GABPB1-202ENST00000359031 HBBP68871 147 aa11.54□□□□□ -0.56
GABPB1-202ENST00000359031 ZC2HC1AQ96GY0 325 aa11.54□□□□□ -0.56
GABPB1-202ENST00000359031 HIF1ANQ9NWT6 349 aa11.54□□□□□ -0.56
GABPB1-202ENST00000359031 H3BUX3 64 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 SLAQ13239 276 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 IQCJQ1A5X6 159 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 C1orf194Q5T5A4 169 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 GDF5OSQ5U4N7 250 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 OR2D3Q8NGH3 330 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 GTSF1Q8WW33 167 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 MS4A10Q96PG2 267 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 SMAD5-AS1Q9Y6J3 95 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 BUB3O43684 328 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 IGHG2P01859 326 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 CT45A10P0DMU9 189 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 COX8CQ7Z4L0 72 aa11.53□□□□□ -0.56
GABPB1-202ENST00000359031 NOL4LQ96MY1 436 aaPredicted RBP11.53□□□□□ -0.56
GABPB1-202ENST00000359031 CLPSL1A2RUU4 121 aa11.52□□□□□ -0.57
GABPB1-202ENST00000359031 CHEK1O14757 476 aa11.52□□□□□ -0.57
GABPB1-202ENST00000359031 PKIAP61925 76 aa11.52□□□□□ -0.57
GABPB1-202ENST00000359031 C9orf152Q5JTZ5 239 aa11.52□□□□□ -0.57
GABPB1-202ENST00000359031 LINC01356Q8N9X3 169 aa11.52□□□□□ -0.57
GABPB1-202ENST00000359031 KCNS1Q96KK3 526 aa11.52□□□□□ -0.57
GABPB1-202ENST00000359031 METTL26Q96S19 204 aa11.52□□□□□ -0.57
GABPB1-202ENST00000359031 SLC50A1Q9BRV3 221 aa11.52□□□□□ -0.57
GABPB1-202ENST00000359031 IGHV3-35A0A0C4DH35 117 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 ZNF785A8K8V0 405 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 F2Z2F3 143 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 TRGV3P03979 118 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 FOXA3P55318 350 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-202ENST00000359031 KLF5Q13887 457 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-202ENST00000359031 LY6EQ16553 131 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 SAPCD1Q5SSQ6 148 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 Q6AWC8 147 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 NRGNQ92686 78 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 PGLYRP4Q96LB8 373 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 SAMD10Q9BYL1 202 aa11.51□□□□□ -0.57
GABPB1-202ENST00000359031 TSTD3H0UI37 97 aa11.5□□□□□ -0.57
GABPB1-202ENST00000359031 J3QLI3 93 aa11.5□□□□□ -0.57
GABPB1-202ENST00000359031 CAMPP49913 170 aa11.5□□□□□ -0.57
GABPB1-202ENST00000359031 Q71RC1 249 aaPredicted RBP11.5□□□□□ -0.57
GABPB1-202ENST00000359031 IGHV3OR16-8A0A075B7F1 116 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 IGKV2-40A0A087WW87 121 aaPredicted RBP11.49□□□□□ -0.57
GABPB1-202ENST00000359031 A0A096LNT2 108 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 A8MWP6 167 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 IGKV2D-40P01614 121 aaPredicted RBP11.49□□□□□ -0.57
GABPB1-202ENST00000359031 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 USMG5Q96IX5 58 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 ZNF580Q9UK33 172 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 U3KQE9 123 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 AKAP6Q13023 2319 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 HAX1O00165 279 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 PPIFP30405 207 aaKnown RBP11.49□□□□□ -0.57
GABPB1-202ENST00000359031 CTAG1AP78358 180 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 C8orf49Q96NF6 230 aa11.49□□□□□ -0.57
GABPB1-202ENST00000359031 ALKBH7Q9BT30 221 aaPredicted RBP11.49□□□□□ -0.57
GABPB1-202ENST00000359031 A0A1B0GW15 77 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 RBAKDNA6NC62 111 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 AVPP01185 164 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 IGHG4P01861 327 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 APOHP02749 345 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-202ENST00000359031 ARL3P36405 182 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 CRIP1P50238 77 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 Q6ZWC4 215 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 SIGLECL1Q8N7X8 197 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 GATD1Q8NB37 220 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 MRPL53Q96EL3 112 aaKnown RBP11.48□□□□□ -0.57
GABPB1-202ENST00000359031 RCHY1Q96PM5 261 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 PRR25Q96S07 402 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 FOXC2Q99958 501 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 SSBP4Q9BWG4 385 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-202ENST00000359031 NAGKQ9UJ70 344 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 LINC00527Q9UJ94 153 aa11.48□□□□□ -0.57
GABPB1-202ENST00000359031 GPX1P07203 203 aa11.47□□□□□ -0.57
GABPB1-202ENST00000359031 RIGQ13278 110 aa11.47□□□□□ -0.57
GABPB1-202ENST00000359031 FAM162BQ5T6X4 162 aa11.47□□□□□ -0.57
GABPB1-202ENST00000359031 LCN12Q6JVE5 192 aa11.47□□□□□ -0.57
GABPB1-202ENST00000359031 NDFIP1Q9BT67 221 aa11.47□□□□□ -0.57
GABPB1-202ENST00000359031 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.46□□□□□ -0.57
GABPB1-202ENST00000359031 A0A1B0GUT8 65 aa11.46□□□□□ -0.57
GABPB1-202ENST00000359031 A0A1W2PS18 150 aa11.46□□□□□ -0.57
GABPB1-202ENST00000359031 SH2D1AO60880 128 aa11.46□□□□□ -0.57
GABPB1-202ENST00000359031 ZNF324O75467 553 aaPredicted RBP11.46□□□□□ -0.57
GABPB1-202ENST00000359031 SCGB1D1O95968 90 aa11.46□□□□□ -0.57
GABPB1-202ENST00000359031 AMTP48728 403 aa11.46□□□□□ -0.57
GABPB1-202ENST00000359031 ASCL2Q99929 193 aa11.46□□□□□ -0.57
GABPB1-202ENST00000359031 NDUFA4O00483 81 aa11.46□□□□□ -0.58
GABPB1-202ENST00000359031 HLA-DMBP28068 263 aa11.46□□□□□ -0.58
GABPB1-202ENST00000359031 RPS20P60866 119 aaKnown RBP11.46□□□□□ -0.58
GABPB1-202ENST00000359031 LOXL1Q08397 574 aaPredicted RBP11.46□□□□□ -0.58
GABPB1-202ENST00000359031 BORCS7Q96B45 105 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms