RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 LOXP28300 417 aaPredicted RBP11.03□□□□□ -0.64
VCP-201ENST00000358901 PDE6HQ13956 83 aa11.03□□□□□ -0.64
VCP-201ENST00000358901 KIR3DS1Q14943 382 aa11.03□□□□□ -0.64
VCP-201ENST00000358901 GFRA4Q9GZZ7 299 aa11.03□□□□□ -0.64
VCP-201ENST00000358901 ARHGAP21Q5T5U3 1957 aa11.03□□□□□ -0.64
VCP-201ENST00000358901 FCN3O75636 299 aa11.03□□□□□ -0.64
VCP-201ENST00000358901 IGLV1-44P01699 117 aa11.03□□□□□ -0.64
VCP-201ENST00000358901 PRR30Q53SZ7 412 aaPredicted RBP11.03□□□□□ -0.64
VCP-201ENST00000358901 ZNF876PQ49A33 203 aa11.02□□□□□ -0.64
VCP-201ENST00000358901 ZNF833PQ6ZTB9 187 aa11.02□□□□□ -0.64
VCP-201ENST00000358901 MRPL52Q86TS9 123 aaKnown RBP11.02□□□□□ -0.64
VCP-201ENST00000358901 C11orf52Q96A22 123 aa11.02□□□□□ -0.64
VCP-201ENST00000358901 TRAV12-3A0A0B4J271 114 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 DPH3P1Q9H4G8 78 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 NCOR1P1Q9H4R4 102 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 ZNF492Q9P255 531 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 PEMTQ9UBM1 199 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 COX11Q9Y6N1 276 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 TRBV7-9A0A0J9YWB2 115 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 SAA4P35542 130 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 DIAPH2-AS1Q14236 149 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 RNF138Q8WVD3 245 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 GAGE12BA1L429 117 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 FAM231BA6NCW3 169 aa11.02□□□□□ -0.65
VCP-201ENST00000358901 CD5LO43866 347 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 NDUFB8O95169 186 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 PRR20EP86478 221 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 PRR20CP86479 221 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 PRR20DP86480 221 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 PRR20BP86481 221 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 PRR20AP86496 221 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 Q8TCH9 128 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 SIGMAR1Q99720 223 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 BPESC1Q9GZL8 116 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 IGLV3-9A0A075B6K5 115 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 TRBV7-1A0A0A6YYK4 115 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 DKK1O94907 266 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 CT83Q5H943 113 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 EML6Q6ZMW3 1958 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 TNFRSF6BO95407 300 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 FAM231DQ6ZW35 169 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 STHQ8IWL8 128 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 C10orf126Q8N4M7 172 aa11.01□□□□□ -0.65
VCP-201ENST00000358901 SRSF8Q9BRL6 282 aaKnown RBP11.01□□□□□ -0.65
VCP-201ENST00000358901 A8MWV9 139 aa11□□□□□ -0.65
VCP-201ENST00000358901 PLXNB3Q9ULL4 1909 aa11□□□□□ -0.65
VCP-201ENST00000358901 IGLL1P15814 213 aa11□□□□□ -0.65
VCP-201ENST00000358901 TRGV11A0A075B6L2 103 aa11□□□□□ -0.65
VCP-201ENST00000358901 IGHV3-73A0A0B4J1V6 119 aa11□□□□□ -0.65
VCP-201ENST00000358901 CSTL1Q9H114 145 aa11□□□□□ -0.65
VCP-201ENST00000358901 MYO9AB2RTY4 2548 aa11□□□□□ -0.65
VCP-201ENST00000358901 PAX2Q02962 417 aa11□□□□□ -0.65
VCP-201ENST00000358901 FAM104BQ5XKR9 115 aa11□□□□□ -0.65
VCP-201ENST00000358901 DTX1Q86Y01 620 aa11□□□□□ -0.65
VCP-201ENST00000358901 C8orf49Q96NF6 230 aa11□□□□□ -0.65
VCP-201ENST00000358901 RHPN1-AS1Q9BWJ2 59 aa11□□□□□ -0.65
VCP-201ENST00000358901 LINC01549A6NIU2 74 aa10.99□□□□□ -0.65
VCP-201ENST00000358901 TMEM95Q3KNT9 176 aa10.99□□□□□ -0.65
VCP-201ENST00000358901 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
VCP-201ENST00000358901 PLXNB1O43157 2135 aa10.99□□□□□ -0.65
VCP-201ENST00000358901 C11orf53Q8IXP5 236 aa10.99□□□□□ -0.65
VCP-201ENST00000358901 RCHY1Q96PM5 261 aa10.99□□□□□ -0.65
VCP-201ENST00000358901 CHD3Q12873 2000 aaKnown RBP10.99□□□□□ -0.65
VCP-201ENST00000358901 FAM215AQ9Y5M1 114 aa10.99□□□□□ -0.65
VCP-201ENST00000358901 PIEZO2Q9H5I5 2752 aa10.99□□□□□ -0.65
VCP-201ENST00000358901 VCYO14598 125 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 NPSP0C0P6 89 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 OVOL3O00110 214 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 CEACAM8P31997 349 aaPredicted RBP10.98□□□□□ -0.65
VCP-201ENST00000358901 POU2AF1Q16633 256 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 Q5PR19 223 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 A0A087WWL8 130 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 K7EN84 100 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 KLF2Q9Y5W3 355 aaPredicted RBP10.98□□□□□ -0.65
VCP-201ENST00000358901 FRMPD3Q5JV73 1810 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 G3V318 75 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 TDGF1P13385 188 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 TMEM75Q8N9X5 138 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 FXYD5Q96DB9 178 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 CHAC1Q9BUX1 264 aa10.98□□□□□ -0.65
VCP-201ENST00000358901 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
VCP-201ENST00000358901 HTN3P15516 51 aa10.97□□□□□ -0.65
VCP-201ENST00000358901 TEX36Q5VZQ5 186 aa10.97□□□□□ -0.65
VCP-201ENST00000358901 LINC00311Q8N616 119 aa10.97□□□□□ -0.65
VCP-201ENST00000358901 IGLC1P0CG04 106 aa10.97□□□□□ -0.65
VCP-201ENST00000358901 PRSS57Q6UWY2 283 aa10.97□□□□□ -0.65
VCP-201ENST00000358901 Q6ZSR3 168 aa10.97□□□□□ -0.65
VCP-201ENST00000358901 IGHV1-24A0A0C4DH33 117 aa10.96□□□□□ -0.65
VCP-201ENST00000358901 PRR25Q96S07 402 aa10.96□□□□□ -0.65
VCP-201ENST00000358901 NPC2P61916 151 aa10.96□□□□□ -0.66
VCP-201ENST00000358901 VWC2Q2TAL6 325 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 PYGO2Q9BRQ0 406 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 B4DSR2 109 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 TMEM238C9JI98 176 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 IGFL3Q6UXB1 125 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 USMG5Q96IX5 58 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 CENPFP49454 3210 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms