RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 A8MTW9 85 aa17.81■□□□□ 0.44
ALKAL1-201ENST00000358543 HMGB3O15347 200 aaKnown RBP17.81■□□□□ 0.44
ALKAL1-201ENST00000358543 DUSP14O95147 198 aaKnown RBP17.81■□□□□ 0.44
ALKAL1-201ENST00000358543 ARL14EPLP0DKL9 152 aa17.81■□□□□ 0.44
ALKAL1-201ENST00000358543 OR8A1Q8NGG7 326 aa17.81■□□□□ 0.44
ALKAL1-201ENST00000358543 TP53TG1Q9Y2A0 90 aa17.81■□□□□ 0.44
ALKAL1-201ENST00000358543 CXorf1O96002 111 aa17.8■□□□□ 0.44
ALKAL1-201ENST00000358543 ZNF726P1Q15940 193 aa17.8■□□□□ 0.44
ALKAL1-201ENST00000358543 SUN5Q8TC36 379 aa17.8■□□□□ 0.44
ALKAL1-201ENST00000358543 PLA2G2EQ9NZK7 142 aa17.8■□□□□ 0.44
ALKAL1-201ENST00000358543 COL7A1Q02388 2944 aa17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 ZNF705FA8MVS1 300 aaPredicted RBP17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 CA1P00915 261 aaPredicted RBP17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 GIG44P09565 113 aaPredicted RBP17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 EIF5AL1Q6IS14 154 aaKnown RBP17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 SSX7Q7RTT5 188 aa17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 EXOC3-AS1Q8N2X6 119 aa17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 OR4B1Q8NGF8 309 aa17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 PHYHIPLQ96FC7 376 aa17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 NBEAL2Q6ZNJ1 2754 aa17.79■□□□□ 0.44
ALKAL1-201ENST00000358543 CNN1P51911 297 aaKnown RBP17.78■□□□□ 0.44
ALKAL1-201ENST00000358543 RANP62826 216 aaKnown RBP17.78■□□□□ 0.44
ALKAL1-201ENST00000358543 RNF183Q96D59 192 aa17.78■□□□□ 0.44
ALKAL1-201ENST00000358543 GCHFRP30047 84 aa17.77■□□□□ 0.44
ALKAL1-201ENST00000358543 ICAM4Q14773 271 aa17.77■□□□□ 0.44
ALKAL1-201ENST00000358543 DPPA3Q6W0C5 159 aa17.77■□□□□ 0.44
ALKAL1-201ENST00000358543 TMED6Q8WW62 240 aa17.77■□□□□ 0.44
ALKAL1-201ENST00000358543 OVOL2Q9BRP0 275 aa17.77■□□□□ 0.44
ALKAL1-201ENST00000358543 TMEM167BQ9NRX6 74 aa17.77■□□□□ 0.44
ALKAL1-201ENST00000358543 U3KQK5 164 aa17.77■□□□□ 0.44
ALKAL1-201ENST00000358543 PRAC2D3DTV9 90 aa17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 M0R3E3 92 aa17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 SPRY2O43597 315 aa17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 IGKV3-20P01619 116 aa17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 ZNF705DP0CH99 300 aaPredicted RBP17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 ZNF705BP0CI00 300 aaPredicted RBP17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 HIST1H1AQ02539 215 aaPredicted RBP17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 DEFB135Q30KP9 77 aa17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 RCHY1Q96PM5 261 aa17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 C1QTNF4Q9BXJ3 329 aa17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 Q9H3A6 140 aa17.76■□□□□ 0.43
ALKAL1-201ENST00000358543 AMTNQ6UX39 209 aa17.75■□□□□ 0.43
ALKAL1-201ENST00000358543 OR10J6PQ8NGY7 276 aa17.75■□□□□ 0.43
ALKAL1-201ENST00000358543 RETNQ9HD89 108 aa17.75■□□□□ 0.43
ALKAL1-201ENST00000358543 OTORQ9NRC9 128 aa17.75■□□□□ 0.43
ALKAL1-201ENST00000358543 FHITP49789 147 aa17.74■□□□□ 0.43
ALKAL1-201ENST00000358543 CSNK1G2-AS1Q8NCQ2 148 aa17.74■□□□□ 0.43
ALKAL1-201ENST00000358543 RAB5CP51148 216 aa17.73■□□□□ 0.43
ALKAL1-201ENST00000358543 NKX2-5P52952 324 aaPredicted RBP17.73■□□□□ 0.43
ALKAL1-201ENST00000358543 FAM74A1Q5RGS3 127 aa17.73■□□□□ 0.43
ALKAL1-201ENST00000358543 ARL6IP6Q8N6S5 226 aa17.73■□□□□ 0.43
ALKAL1-201ENST00000358543 RXFP4Q8TDU9 374 aa17.73■□□□□ 0.43
ALKAL1-201ENST00000358543 MBD3L1Q8WWY6 194 aa17.73■□□□□ 0.43
ALKAL1-201ENST00000358543 TENM3Q9P273 2699 aa17.73■□□□□ 0.43
ALKAL1-201ENST00000358543 MAP1LC3B2A6NCE7 125 aa17.72■□□□□ 0.43
ALKAL1-201ENST00000358543 CSN1S1P47710 185 aa17.72■□□□□ 0.43
ALKAL1-201ENST00000358543 MAP1LC3BQ9GZQ8 125 aa17.72■□□□□ 0.43
ALKAL1-201ENST00000358543 SLC35B3Q9H1N7 401 aa17.72■□□□□ 0.43
ALKAL1-201ENST00000358543 NPIPB6E9PJ23 425 aa17.71■□□□□ 0.43
ALKAL1-201ENST00000358543 FAM213BQ8TBF2 198 aa17.71■□□□□ 0.43
ALKAL1-201ENST00000358543 XCL2Q9UBD3 114 aa17.71■□□□□ 0.43
ALKAL1-201ENST00000358543 PGPA6NDG6 321 aa17.7■□□□□ 0.42
ALKAL1-201ENST00000358543 AMBPP02760 352 aa17.7■□□□□ 0.42
ALKAL1-201ENST00000358543 PRB4P10163 310 aaPredicted RBP17.7■□□□□ 0.42
ALKAL1-201ENST00000358543 FGF8P55075 233 aaPredicted RBP17.7■□□□□ 0.42
ALKAL1-201ENST00000358543 PPP1R14DQ9NXH3 145 aa17.7■□□□□ 0.42
ALKAL1-201ENST00000358543 STAB2Q8WWQ8 2551 aa17.69■□□□□ 0.42
ALKAL1-201ENST00000358543 A0A1W2PRE2 83 aa17.69■□□□□ 0.42
ALKAL1-201ENST00000358543 SULT1A2P50226 295 aa17.69■□□□□ 0.42
ALKAL1-201ENST00000358543 FXYD7P58549 80 aa17.69■□□□□ 0.42
ALKAL1-201ENST00000358543 C9orf47Q6ZRZ4 202 aa17.69■□□□□ 0.42
ALKAL1-201ENST00000358543 LINC00477Q96M19 166 aa17.69■□□□□ 0.42
ALKAL1-201ENST00000358543 ODF3Q96PU9 254 aa17.69■□□□□ 0.42
ALKAL1-201ENST00000358543 TMPRSS5Q9H3S3 457 aa17.69■□□□□ 0.42
ALKAL1-201ENST00000358543 RBAKDNA6NC62 111 aa17.68■□□□□ 0.42
ALKAL1-201ENST00000358543 DIRC3C9JPN6 131 aa17.68■□□□□ 0.42
ALKAL1-201ENST00000358543 BOLA2-SMG1P6H3BVE0 249 aa17.68■□□□□ 0.42
ALKAL1-201ENST00000358543 IQCF2Q8IXL9 164 aa17.68■□□□□ 0.42
ALKAL1-201ENST00000358543 CMTM2Q8TAZ6 248 aa17.68■□□□□ 0.42
ALKAL1-201ENST00000358543 SFT2D1Q8WV19 159 aa17.68■□□□□ 0.42
ALKAL1-201ENST00000358543 RARRES2Q99969 163 aa17.68■□□□□ 0.42
ALKAL1-201ENST00000358543 SLC25A5P05141 298 aaKnown RBP17.67■□□□□ 0.42
ALKAL1-201ENST00000358543 H2AFB1P0C5Y9 115 aa17.67■□□□□ 0.42
ALKAL1-201ENST00000358543 AGPAT4-IT1Q9H0P7 198 aa17.67■□□□□ 0.42
ALKAL1-201ENST00000358543 ZNF705EA8MWA4 302 aaPredicted RBP17.66■□□□□ 0.42
ALKAL1-201ENST00000358543 CT45A10P0DMU9 189 aa17.66■□□□□ 0.42
ALKAL1-201ENST00000358543 SPINK13Q1W4C9 94 aa17.66■□□□□ 0.42
ALKAL1-201ENST00000358543 OR11H2Q8NH07 326 aa17.66■□□□□ 0.42
ALKAL1-201ENST00000358543 IGF2BP2-AS1Q96M15 143 aa17.66■□□□□ 0.42
ALKAL1-201ENST00000358543 NKX6-2Q9C056 277 aaPredicted RBP17.66■□□□□ 0.42
ALKAL1-201ENST00000358543 BOLA1Q9Y3E2 137 aa17.66■□□□□ 0.42
ALKAL1-201ENST00000358543 IGKV2-40A0A087WW87 121 aaPredicted RBP17.65■□□□□ 0.42
ALKAL1-201ENST00000358543 M0R2Z0 102 aa17.65■□□□□ 0.42
ALKAL1-201ENST00000358543 CRXO43186 299 aaPredicted RBP17.65■□□□□ 0.42
ALKAL1-201ENST00000358543 IGKV2D-40P01614 121 aaPredicted RBP17.65■□□□□ 0.42
ALKAL1-201ENST00000358543 TSPOP30536 169 aa17.65■□□□□ 0.42
ALKAL1-201ENST00000358543 CDKN1BP46527 198 aa17.65■□□□□ 0.42
ALKAL1-201ENST00000358543 VGLL1Q99990 258 aa17.65■□□□□ 0.42
ALKAL1-201ENST00000358543 TRAV1-1A0A0B4J248 108 aa17.64■□□□□ 0.41
ALKAL1-201ENST00000358543 SUMO1P63165 101 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms