RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 FAM223AQ8IWN6 122 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 APELAP0DMC3 54 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 DEFB123Q8N688 67 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 TNFRSF6BO95407 300 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 IGHG3P01860 377 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 FAM106AQ4KMX7 169 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 WFDC3Q8IUB2 231 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 EEF1AKMT3Q96AZ1 226 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 C15orf53Q8NAA6 179 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 CCL17Q92583 94 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 C20orf204Q6ZNR8 217 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 A0A0J9YXY3 114 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 ZNF815PA8K554 130 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 AGFG2O95081 481 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 EP400Q96L91 3159 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 LINC00473A8K010 186 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 DNAL4O96015 105 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 D6R8Y8 96 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 F5H697 171 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 CDCP2Q5VXM1 449 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 MLST8Q9BVC4 326 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 TMEM133Q9H2Q1 129 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 PROK2Q9HC23 129 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 C16orf54Q6UWD8 224 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 CD40P25942 277 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 GCSAMLQ5JQS6 135 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 Q71RC1 249 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-204ENST00000358025 HES7Q9BYE0 225 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 FCN3O75636 299 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 ZNF841Q6ZN19 808 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 ZNF788Q6ZQV5 615 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 ZNF837Q96EG3 531 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-204ENST00000358025 LAMTOR3Q9UHA4 124 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 IFI27P40305 119 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-204ENST00000358025 TDRG1Q3Y452 100 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 ANKRD29Q8N6D5 301 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 K7EN84 100 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 PSPNO60542 156 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 PIK3CD-AS1Q5SR53 167 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 PPP1R32Q7Z5V6 425 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 C19orf71A6NCJ1 209 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 OVOL1O14753 267 aa3.32□□□□□ -1.88
SYNE2-204ENST00000358025 SAA2P0DJI9 122 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-204ENST00000358025 TEX36Q5VZQ5 186 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 LYZL1Q6UWQ5 148 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 IGF2BP2-AS1Q96M15 143 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 DUSP14O95147 198 aaKnown RBP3.31□□□□□ -1.88
SYNE2-204ENST00000358025 H3BT86 120 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 TRAV13-2A0A0B4J235 113 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 UQCRFS1P47985 274 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 HCP5Q6MZN7 132 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 IGHV3-43A0A0B4J1X8 118 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 PF4P02776 101 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 IGHV3-43DP0DP04 118 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 CEACAM8P31997 349 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-204ENST00000358025 CXorf67Q86X51 503 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-204ENST00000358025 C10orf142B7Z368 130 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 DSCAMO60469 2012 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 IGLV3-9A0A075B6K5 115 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 TRAV2A0A0B4J234 112 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 PMS2CLQ68D20 193 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 GPHA2Q96T91 129 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 RPS28P62857 69 aaKnown RBP3.31□□□□□ -1.88
SYNE2-204ENST00000358025 PRR25Q96S07 402 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 TRBV25-1A0A075B6N4 114 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 E9PLN8 166 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 EBLN2Q6P2I7 272 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 FAM159AQ6UWV7 190 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 VKORC1Q9BQB6 163 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 F8P00451 2351 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 CYYR1Q96J86 154 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 TMEM158Q8WZ71 300 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 CD33P20138 364 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 SNRPD3P62318 126 aaKnown RBP3.31□□□□□ -1.88
SYNE2-204ENST00000358025 KIAA1549LQ6ZVL6 1849 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 Q86TA4 180 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 FAM90A27PA6NNH2 459 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 P0DMU3 169 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 FAM231AP0DMU4 169 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 FAM231CP0DMU5 169 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 SPATA25Q9BR10 227 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 C17orf100A8MU93 164 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 CRYGCP07315 174 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 CGB3P0DN86 165 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 CGB7P0DN87 165 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 ITLN1Q8WWA0 313 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 FBXL15Q9H469 300 aa3.31□□□□□ -1.88
SYNE2-204ENST00000358025 RPL39P5Q59GN2 51 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 DPH3Q96FX2 82 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 DKK4Q9UBT3 224 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 TRAV5A0A0B4J249 113 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 PDE6GP18545 87 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 TMEM200BQ69YZ2 307 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 TRAV26-1A0A087WT03 109 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 NUPR1O60356 82 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 MDS2Q8NDY4 140 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 CCL13Q99616 98 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 SLC25A15Q9Y619 301 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 RHODO00212 210 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms