RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 LINC00473A8K010 186 aa8.96□□□□□ -0.98
GTF3C1-201ENST00000356183 TMEM14EPQ6UXP3 125 aa8.96□□□□□ -0.98
GTF3C1-201ENST00000356183 IGHV1-8P0DP01 117 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 CYYR1Q96J86 154 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 COX8AP10176 69 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 CEACAM8P31997 349 aaPredicted RBP8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 FOXF2Q12947 444 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 HLA-DRB4P13762 266 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 TMEM75Q8N9X5 138 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 HLA-DRB4X5D2U9 266 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 SCN5AQ14524 2016 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 C15orf62A8K5M9 175 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 I3L3M4 83 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 WDR81Q562E7 1941 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 POLEQ07864 2286 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 Q8N8P6 123 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 MRPL51Q4U2R6 128 aaKnown RBP8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 C9orf139Q6ZV77 190 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 RNF144BQ7Z419 303 aa8.95□□□□□ -0.98
GTF3C1-201ENST00000356183 PI4KAP42356 2102 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 SPTBN2O15020 2390 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 NDUFC2O95298 119 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 IGLL1P15814 213 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 OR11H6Q8NGC7 330 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 IGHG2P01859 326 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 A0A0G2JRQ6 117 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 GAGE7O76087 117 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 GAGE12FP0CL80 117 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 GAGE12GP0CL81 117 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 GAGE12IP0CL82 117 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 AMTNQ6UX39 209 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 PRO1854Q9UHT4 67 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 SYNJ2BPP57105 145 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 BRD3OSQ6XYD6 125 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 SVIPQ8NHG7 77 aa8.94□□□□□ -0.98
GTF3C1-201ENST00000356183 CDPF1Q6NVV7 123 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 PRSS46E5RG02 174 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 CDKN1BP46527 198 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 RNASE6Q93091 150 aaKnown RBP8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 MRPS18CQ9Y3D5 142 aaKnown RBP8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 HEATR1Q9H583 2144 aaKnown RBP8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 PSPNO60542 156 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 TAL2Q16559 108 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 CLPSL2Q6UWE3 100 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 KLHL30-AS1Q8NEE0 82 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 WFDC9Q8NEX5 89 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 C2orf66Q6UXQ4 117 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 Q6ZVH6 145 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 PIP4P2Q8N4L2 257 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 EPOPA6NHQ4 379 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 LYPD1Q8N2G4 141 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 KLHDC3Q9BQ90 382 aa8.93□□□□□ -0.98
GTF3C1-201ENST00000356183 BUB1B-PAK6H3BSN5 160 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 EGR2P11161 476 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 CMC4P56277 68 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 SMIM20Q8N5G0 67 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 MED12Q93074 2177 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 FREM3P0C091 2139 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 TRBV25-1A0A075B6N4 114 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 A0A1W2PPI3 338 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 C5orf63A6NC05 138 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 CHKB-CPT1BH3BT56 60 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 NTN5Q8WTR8 489 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 TMEM243Q9BU79 118 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 TRPM7Q96QT4 1865 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 EFNA2O43921 213 aa8.92□□□□□ -0.98
GTF3C1-201ENST00000356183 FAM223BA6NKX1 122 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 FAM223AQ8IWN6 122 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 HS3ST6Q96QI5 342 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 CRYGSP22914 178 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 SPINK13Q1W4C9 94 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 FAM104BQ5XKR9 115 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 VOPP1Q96AW1 172 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 RHPN1-AS1Q9BWJ2 59 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 SPANXDQ9BXN6 97 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 C12orf74Q32Q52 190 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 SPTBN1Q01082 2364 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 CRYGCP07315 174 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 RNASE2P10153 161 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 VWC2Q2TAL6 325 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 IGHV4-4A0A075B6R2 117 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 TRAV12-2A0A075B6T6 113 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 SMIM27A0A1W2PRY6 76 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 ZNRD1Q9P1U0 126 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 SIGLEC9Q9Y336 463 aa8.91□□□□□ -0.98
GTF3C1-201ENST00000356183 TRAV13-2A0A0B4J235 113 aa8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 CCL25O15444 150 aa8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 ZNF672Q499Z4 452 aaPredicted RBP8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 GAFA1Q96PS6 74 aa8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 SIGLEC8Q9NYZ4 499 aa8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 NDUFA12Q9UI09 145 aa8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 TMEM178BH3BS89 294 aa8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 H3BUX3 64 aa8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 YLPM1P49750 1951 aaKnown RBP8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 A0A096LPF7 62 aa8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 BAALCQ8WXS3 180 aa8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 MRPL35Q9NZE8 188 aaKnown RBP8.9□□□□□ -0.98
GTF3C1-201ENST00000356183 DKK2Q9UBU2 259 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms