RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 H3BMM0 161 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 TEX46H3BTG2 121 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 RBMY1DP0C7P1 496 aaKnown RBP11.48□□□□□ -0.57
TRIM13-201ENST00000356017 HLA-DMBP28068 263 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 APOC4P55056 127 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 ICAM4Q14773 271 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 Q9H3A6 140 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 A0A0J9YX75 114 aa11.47□□□□□ -0.57
TRIM13-201ENST00000356017 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
TRIM13-201ENST00000356017 FGF8P55075 233 aaPredicted RBP11.47□□□□□ -0.57
TRIM13-201ENST00000356017 NUTF2P61970 127 aaKnown RBP11.47□□□□□ -0.57
TRIM13-201ENST00000356017 ALKAL2Q6UX46 152 aa11.47□□□□□ -0.57
TRIM13-201ENST00000356017 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
TRIM13-201ENST00000356017 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
TRIM13-201ENST00000356017 B9D2Q9BPU9 175 aa11.47□□□□□ -0.57
TRIM13-201ENST00000356017 MEGF8Q7Z7M0 2845 aa11.47□□□□□ -0.57
TRIM13-201ENST00000356017 RPL35AP18077 110 aaKnown RBP11.46□□□□□ -0.57
TRIM13-201ENST00000356017 CSN1S1P47710 185 aa11.46□□□□□ -0.57
TRIM13-201ENST00000356017 OR8A1Q8NGG7 326 aa11.46□□□□□ -0.57
TRIM13-201ENST00000356017 RXFP4Q8TDU9 374 aa11.46□□□□□ -0.57
TRIM13-201ENST00000356017 OTORQ9NRC9 128 aa11.46□□□□□ -0.57
TRIM13-201ENST00000356017 ZNF705FA8MVS1 300 aaPredicted RBP11.46□□□□□ -0.58
TRIM13-201ENST00000356017 F6UB75 175 aa11.46□□□□□ -0.58
TRIM13-201ENST00000356017 GDF5OSQ5U4N7 250 aa11.46□□□□□ -0.58
TRIM13-201ENST00000356017 TEX261Q6UWH6 196 aa11.46□□□□□ -0.58
TRIM13-201ENST00000356017 ZNF767PQ75MW2 155 aa11.46□□□□□ -0.58
TRIM13-201ENST00000356017 OR10J6PQ8NGY7 276 aa11.46□□□□□ -0.58
TRIM13-201ENST00000356017 CMTM2Q8TAZ6 248 aa11.46□□□□□ -0.58
TRIM13-201ENST00000356017 NKX6-2Q9C056 277 aaPredicted RBP11.46□□□□□ -0.58
TRIM13-201ENST00000356017 CSTL1Q9H114 145 aa11.46□□□□□ -0.58
TRIM13-201ENST00000356017 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 A0A1W2PRE2 83 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 PGPA6NDG6 321 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 ZNF705EA8MWA4 302 aaPredicted RBP11.45□□□□□ -0.58
TRIM13-201ENST00000356017 M0R3E3 92 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 UBE2CO00762 179 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 HBE1P02100 147 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 DEFB1P60022 68 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 HAGHQ16775 308 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
TRIM13-201ENST00000356017 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 ZNF680Q8NEM1 530 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 OR4B1Q8NGF8 309 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 TMPRSS5Q9H3S3 457 aa11.45□□□□□ -0.58
TRIM13-201ENST00000356017 PPT1P50897 306 aa11.44□□□□□ -0.58
TRIM13-201ENST00000356017 CNN1P51911 297 aaKnown RBP11.44□□□□□ -0.58
TRIM13-201ENST00000356017 HIST1H1AQ02539 215 aaPredicted RBP11.44□□□□□ -0.58
TRIM13-201ENST00000356017 BLOC1S1P78537 153 aa11.43□□□□□ -0.58
TRIM13-201ENST00000356017 NDUFA5Q16718 116 aa11.43□□□□□ -0.58
TRIM13-201ENST00000356017 SBSPONQ8IVN8 264 aa11.43□□□□□ -0.58
TRIM13-201ENST00000356017 ARL2-SNX15V9GYD0 113 aa11.43□□□□□ -0.58
TRIM13-201ENST00000356017 A8MTW9 85 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 PRAC2D3DTV9 90 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 ZNF705DP0CH99 300 aaPredicted RBP11.42□□□□□ -0.58
TRIM13-201ENST00000356017 ZNF705BP0CI00 300 aaPredicted RBP11.42□□□□□ -0.58
TRIM13-201ENST00000356017 SUMO1P63165 101 aaKnown RBP11.42□□□□□ -0.58
TRIM13-201ENST00000356017 C5orf17Q8NAS9 161 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 C1QTNF4Q9BXJ3 329 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 PPP1R14DQ9NXH3 145 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 A0A1B0GV50 99 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 RBAKDNA6NC62 111 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 IGKV3-20P01619 116 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
TRIM13-201ENST00000356017 Q6ZWC4 215 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 LINC00477Q96M19 166 aa11.42□□□□□ -0.58
TRIM13-201ENST00000356017 FAM74A7A6NL05 159 aa11.41□□□□□ -0.58
TRIM13-201ENST00000356017 DIRC3C9JPN6 131 aa11.41□□□□□ -0.58
TRIM13-201ENST00000356017 CA1P00915 261 aaPredicted RBP11.41□□□□□ -0.58
TRIM13-201ENST00000356017 IFNA7P01567 189 aa11.41□□□□□ -0.58
TRIM13-201ENST00000356017 SLC25A5P05141 298 aaKnown RBP11.41□□□□□ -0.58
TRIM13-201ENST00000356017 UBE2G2P60604 165 aa11.41□□□□□ -0.58
TRIM13-201ENST00000356017 SERTM2A0A1B0GWG4 89 aa11.4□□□□□ -0.58
TRIM13-201ENST00000356017 GGTLC3B5MD39 225 aa11.4□□□□□ -0.58
TRIM13-201ENST00000356017 NPIPB6E9PJ23 425 aa11.4□□□□□ -0.58
TRIM13-201ENST00000356017 ASCL2Q99929 193 aa11.4□□□□□ -0.58
TRIM13-201ENST00000356017 TCEAL7Q9BRU2 100 aa11.4□□□□□ -0.58
TRIM13-201ENST00000356017 ZMAT4Q9H898 229 aa11.4□□□□□ -0.58
TRIM13-201ENST00000356017 MANBALQ9NQG1 85 aa11.4□□□□□ -0.58
TRIM13-201ENST00000356017 YTHDF2Q9Y5A9 579 aaKnown RBP11.4□□□□□ -0.58
TRIM13-201ENST00000356017 K7EQM0 130 aa11.39□□□□□ -0.59
TRIM13-201ENST00000356017 AMBPP02760 352 aa11.39□□□□□ -0.59
TRIM13-201ENST00000356017 TMEM78Q5T7P6 136 aa11.39□□□□□ -0.59
TRIM13-201ENST00000356017 CST9LP1Q5W188 147 aa11.39□□□□□ -0.59
TRIM13-201ENST00000356017 AMTNQ6UX39 209 aa11.39□□□□□ -0.59
TRIM13-201ENST00000356017 C9orf47Q6ZRZ4 202 aa11.39□□□□□ -0.59
TRIM13-201ENST00000356017 PCNPQ8WW12 178 aaKnown RBP11.39□□□□□ -0.59
TRIM13-201ENST00000356017 SPATA25Q9BR10 227 aa11.39□□□□□ -0.59
TRIM13-201ENST00000356017 TM2D3Q9BRN9 247 aa11.39□□□□□ -0.59
TRIM13-201ENST00000356017 EPDR1Q9UM22 224 aa11.39□□□□□ -0.59
TRIM13-201ENST00000356017 IGKV2-40A0A087WW87 121 aaPredicted RBP11.38□□□□□ -0.59
TRIM13-201ENST00000356017 PAGE4O60829 102 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 IGKV2D-40P01614 121 aaPredicted RBP11.38□□□□□ -0.59
TRIM13-201ENST00000356017 PRB4P10163 310 aaPredicted RBP11.38□□□□□ -0.59
TRIM13-201ENST00000356017 TSPOP30536 169 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 PMS2P11Q13670 270 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 ODF3Q96PU9 254 aa11.38□□□□□ -0.59
TRIM13-201ENST00000356017 SLC35B3Q9H1N7 401 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms