RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 IGFL3Q6UXB1 125 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 LRRK1Q38SD2 2015 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 C17orf58Q2M2W7 97 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 ZNF833PQ6ZTB9 187 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 WDR86Q86TI4 376 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 TMEM14BQ9NUH8 114 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 J3QKU1 62 aa10.6□□□□□ -0.71
SCN8A-202ENST00000355133 LOXP28300 417 aaPredicted RBP10.6□□□□□ -0.71
SCN8A-202ENST00000355133 THSD7BQ9C0I4 1608 aa10.6□□□□□ -0.71
SCN8A-202ENST00000355133 ANAPC13Q9BS18 74 aa10.6□□□□□ -0.71
SCN8A-202ENST00000355133 REG4Q9BYZ8 158 aa10.6□□□□□ -0.71
SCN8A-202ENST00000355133 TP53BP1Q12888 1972 aaPredicted RBP10.6□□□□□ -0.71
SCN8A-202ENST00000355133 TRAV12-2A0A075B6T6 113 aa10.6□□□□□ -0.71
SCN8A-202ENST00000355133 TRAV8-3A0A0A6YYJ7 113 aa10.6□□□□□ -0.71
SCN8A-202ENST00000355133 CEACAM8P31997 349 aaPredicted RBP10.6□□□□□ -0.71
SCN8A-202ENST00000355133 TMEM75Q8N9X5 138 aa10.6□□□□□ -0.71
SCN8A-202ENST00000355133 GAGE12BA1L429 117 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 GAGE7O76087 117 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 LGALS1P09382 135 aaKnown RBP10.59□□□□□ -0.71
SCN8A-202ENST00000355133 GAGE12FP0CL80 117 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 GAGE12GP0CL81 117 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 GAGE12IP0CL82 117 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 LMO1P25800 156 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 LYL1P12980 280 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 YPEL3P61236 119 aaPredicted RBP10.59□□□□□ -0.71
SCN8A-202ENST00000355133 TCTEX1D4Q5JR98 221 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 C2orf82Q6UX34 121 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 GBF1Q92538 1859 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 ESDP10768 282 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 AZU1P20160 251 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 PAX9P55771 341 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 TPSG1Q9NRR2 321 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 PFN1P07737 140 aaKnown RBP10.59□□□□□ -0.71
SCN8A-202ENST00000355133 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
SCN8A-202ENST00000355133 HEATR1Q9H583 2144 aaKnown RBP10.59□□□□□ -0.71
SCN8A-202ENST00000355133 MST1LQ2TV78 715 aa10.58□□□□□ -0.72
SCN8A-202ENST00000355133 FAM120AOSQ5T036 256 aa10.58□□□□□ -0.72
SCN8A-202ENST00000355133 C8orf86Q6ZUL3 223 aa10.58□□□□□ -0.72
SCN8A-202ENST00000355133 SIGMAR1Q99720 223 aa10.58□□□□□ -0.72
SCN8A-202ENST00000355133 GFRA4Q9GZZ7 299 aa10.58□□□□□ -0.72
SCN8A-202ENST00000355133 MRPL27Q9P0M9 148 aaKnown RBP10.58□□□□□ -0.72
SCN8A-202ENST00000355133 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.58□□□□□ -0.72
SCN8A-202ENST00000355133 IGHV3-38A0A0C4DH36 116 aa10.58□□□□□ -0.72
SCN8A-202ENST00000355133 ZNF561-AS1K7EIQ3 104 aa10.58□□□□□ -0.72
SCN8A-202ENST00000355133 PLA2G2CQ5R387 149 aa10.58□□□□□ -0.72
SCN8A-202ENST00000355133 PHF3Q92576 2039 aaKnown RBP10.57□□□□□ -0.72
SCN8A-202ENST00000355133 RIF1Q5UIP0 2472 aaKnown RBP10.57□□□□□ -0.72
SCN8A-202ENST00000355133 IGLV3-9A0A075B6K5 115 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 MPV17L2Q567V2 206 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 C1orf194Q5T5A4 169 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 DIAPH2-AS1Q14236 149 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 ROS1P08922 2347 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 TRBV19A0A075B6N1 114 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 ZNF48Q96MX3 618 aaPredicted RBP10.57□□□□□ -0.72
SCN8A-202ENST00000355133 KIAA2026Q5HYC2 2103 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 STPG4Q8N801 248 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 ANAPC10Q9UM13 185 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 VWA8A3KMH1 1905 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 TRBV25-1A0A075B6N4 114 aa10.57□□□□□ -0.72
SCN8A-202ENST00000355133 IGHV1OR15-1A0A075B7D0 117 aa10.56□□□□□ -0.72
SCN8A-202ENST00000355133 TEX36Q5VZQ5 186 aa10.56□□□□□ -0.72
SCN8A-202ENST00000355133 TRAV26-2A0A0B4J265 109 aa10.56□□□□□ -0.72
SCN8A-202ENST00000355133 CYYR1Q96J86 154 aa10.56□□□□□ -0.72
SCN8A-202ENST00000355133 FAM215AQ9Y5M1 114 aa10.56□□□□□ -0.72
SCN8A-202ENST00000355133 TCF20Q9UGU0 1960 aaKnown RBP10.56□□□□□ -0.72
SCN8A-202ENST00000355133 MMP23AO75900 390 aa10.56□□□□□ -0.72
SCN8A-202ENST00000355133 ZNF524Q96C55 264 aa10.56□□□□□ -0.72
SCN8A-202ENST00000355133 GAGE2EQ4V326 116 aa10.56□□□□□ -0.72
SCN8A-202ENST00000355133 GAGE2DQ9UEU5 116 aa10.56□□□□□ -0.72
SCN8A-202ENST00000355133 VWC2LB2RUY7 222 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 ETV2O00321 342 aaPredicted RBP10.55□□□□□ -0.72
SCN8A-202ENST00000355133 OCIAD2Q56VL3 154 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 CHAC1Q9BUX1 264 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 RHODO00212 210 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 PFN2P35080 140 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 KIR3DS1Q14943 382 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 ANXA2RQ3ZCQ2 193 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 ZNRF2Q8NHG8 242 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 A0A096LPF7 62 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 GAGE6Q13070 117 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 CADP27708 2225 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 DIDO1Q9BTC0 2240 aaKnown RBP10.55□□□□□ -0.72
SCN8A-202ENST00000355133 NDUFA4O00483 81 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 PMVKQ15126 192 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 I3L3M4 83 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
SCN8A-202ENST00000355133 PRSS46E5RG02 174 aa10.54□□□□□ -0.72
SCN8A-202ENST00000355133 DLX4Q92988 240 aaPredicted RBP10.54□□□□□ -0.72
SCN8A-202ENST00000355133 YLPM1P49750 1951 aaKnown RBP10.54□□□□□ -0.72
SCN8A-202ENST00000355133 J3QLI3 93 aa10.54□□□□□ -0.72
SCN8A-202ENST00000355133 ADCYAP1P18509 176 aa10.54□□□□□ -0.72
SCN8A-202ENST00000355133 C2orf66Q6UXQ4 117 aa10.54□□□□□ -0.72
SCN8A-202ENST00000355133 NEGR1Q7Z3B1 354 aa10.54□□□□□ -0.72
SCN8A-202ENST00000355133 ZNF134P52741 427 aa10.54□□□□□ -0.72
SCN8A-202ENST00000355133 WT1-ASQ06250 92 aa10.54□□□□□ -0.72
SCN8A-202ENST00000355133 KLF12Q9Y4X4 402 aa10.54□□□□□ -0.72
SCN8A-202ENST00000355133 IGKV1-39P01597 117 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 IGKV1D-39P04432 117 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 ZNF114Q8NC26 417 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 CDKN1BP46527 198 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms