RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 PRO0461Q9UI25 63 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 APC2O95996 2303 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 H3BTX0 84 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 CRIP1P50238 77 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 TM4SF20Q53R12 229 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 ZNF562Q6V9R5 426 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 DSCAMO60469 2012 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 ACACAQ13085 2346 aa11.8□□□□□ -0.52
TRAF3-202ENST00000351691 TRAV26-1A0A087WT03 109 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 K7ERJ3 54 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 Q5PR19 223 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 C10orf55Q5SWW7 151 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 FAM201AQ5SY85 155 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 LYZL1Q6UWQ5 148 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 AMN1Q8IY45 258 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 EXOC3-AS1Q8N2X6 119 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 TRBV19A0A075B6N1 114 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 IGKV2D-26A0A0A0MRZ7 120 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 LINC01619G3V211 115 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 K7EM74 188 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 ATP5LO75964 103 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 IGKCP01834 107 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 TNFRSF1AP19438 455 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 FCER1GP30273 86 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 CRYBA4P53673 196 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 C8orf31Q8N9H6 132 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 CCL13Q99616 98 aa11.79□□□□□ -0.52
TRAF3-202ENST00000351691 CEP295Q9C0D2 2601 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 TCTAP57738 103 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 KLF17Q5JT82 389 aaPredicted RBP11.78□□□□□ -0.52
TRAF3-202ENST00000351691 SVILO95425 2214 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 NPIPB5A8MRT5 1133 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 C12orf74Q32Q52 190 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 ETDBQ3ZM63 59 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 RUSC1-AS1Q66K80 236 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 LINC00311Q8N616 119 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 ZNF418Q8TF45 676 aaPredicted RBP11.78□□□□□ -0.52
TRAF3-202ENST00000351691 SCNM1Q9BWG6 230 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 GEMIN7Q9H840 131 aaKnown RBP11.78□□□□□ -0.52
TRAF3-202ENST00000351691 ZNRD1Q9P1U0 126 aa11.78□□□□□ -0.52
TRAF3-202ENST00000351691 PRR14LQ5THK1 2151 aa11.77□□□□□ -0.52
TRAF3-202ENST00000351691 A0A1B0GWB2 263 aa11.77□□□□□ -0.53
TRAF3-202ENST00000351691 TMEM213A2RRL7 107 aa11.77□□□□□ -0.53
TRAF3-202ENST00000351691 NPYP01303 97 aa11.77□□□□□ -0.53
TRAF3-202ENST00000351691 CKS2P33552 79 aa11.77□□□□□ -0.53
TRAF3-202ENST00000351691 MRGPRG-AS1Q2M3A8 158 aa11.77□□□□□ -0.53
TRAF3-202ENST00000351691 DUX4L9Q6RFH8 374 aaPredicted RBP11.77□□□□□ -0.53
TRAF3-202ENST00000351691 Q71RC1 249 aaPredicted RBP11.77□□□□□ -0.53
TRAF3-202ENST00000351691 DEFB108BQ8NET1 73 aa11.77□□□□□ -0.53
TRAF3-202ENST00000351691 MAP1LC3AQ9H492 121 aa11.77□□□□□ -0.53
TRAF3-202ENST00000351691 NGBQ9NPG2 151 aa11.77□□□□□ -0.53
TRAF3-202ENST00000351691 RAI1Q7Z5J4 1906 aaPredicted RBP11.77□□□□□ -0.53
TRAF3-202ENST00000351691 DPM2O94777 84 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 MC5RP33032 325 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 FAM27E3Q08E93 113 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 RRN3P1Q2M238 152 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 SIGLEC15Q6ZMC9 328 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 SH2D6Q7Z4S9 175 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 ARPC1AQ92747 370 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 ATMQ13315 3056 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 KLRD1Q13241 179 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 FAM216BQ8N7L0 139 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 TPPP3Q9BW30 176 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 NXT2Q9NPJ8 142 aaKnown RBP11.76□□□□□ -0.53
TRAF3-202ENST00000351691 CYSLTR1Q9Y271 337 aa11.76□□□□□ -0.53
TRAF3-202ENST00000351691 H3BMG7 143 aa11.75□□□□□ -0.53
TRAF3-202ENST00000351691 LYZP61626 148 aa11.75□□□□□ -0.53
TRAF3-202ENST00000351691 TWIST1Q15672 202 aa11.75□□□□□ -0.53
TRAF3-202ENST00000351691 ANKRD11Q6UB99 2663 aaPredicted RBP11.75□□□□□ -0.53
TRAF3-202ENST00000351691 SRSF2Q01130 221 aaKnown RBP11.75□□□□□ -0.53
TRAF3-202ENST00000351691 SHANK2-AS3Q9BTD1 123 aa11.75□□□□□ -0.53
TRAF3-202ENST00000351691 FXYD7P58549 80 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 C5orf64Q2M2E5 130 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 C8orf86Q6ZUL3 223 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 C17orf100A8MU93 164 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 OR11H12B2RN74 326 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 C16orf97H3BN30 126 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 H3BRN7 92 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 TSPAN13O95857 204 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 RPL27AP46776 148 aaKnown RBP11.74□□□□□ -0.53
TRAF3-202ENST00000351691 PLGLAQ15195 96 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 HCP5Q6MZN7 132 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 OR11H1Q8NG94 326 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 OR11H2Q8NH07 326 aa11.74□□□□□ -0.53
TRAF3-202ENST00000351691 C1QTNF4Q9BXJ3 329 aa11.73□□□□□ -0.53
TRAF3-202ENST00000351691 VCX2Q9H322 139 aa11.73□□□□□ -0.53
TRAF3-202ENST00000351691 SH2D1AO60880 128 aa11.72□□□□□ -0.53
TRAF3-202ENST00000351691 PRSS1P07477 247 aa11.72□□□□□ -0.53
TRAF3-202ENST00000351691 LEPP41159 167 aa11.72□□□□□ -0.53
TRAF3-202ENST00000351691 FOXI1Q12951 378 aa11.72□□□□□ -0.53
TRAF3-202ENST00000351691 PDE6HQ13956 83 aa11.72□□□□□ -0.53
TRAF3-202ENST00000351691 PRRG2O14669 202 aa11.72□□□□□ -0.53
TRAF3-202ENST00000351691 ZC2HC1BQ5TFG8 222 aa11.72□□□□□ -0.53
TRAF3-202ENST00000351691 C22orf34Q6ZV56 151 aa11.72□□□□□ -0.53
TRAF3-202ENST00000351691 BSNQ9UPA5 3926 aa11.72□□□□□ -0.53
TRAF3-202ENST00000351691 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms