RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 A0A1B0GW64 132 aa12.39□□□□□ -0.43
PTPRO-202ENST00000348962 NDUFS7O75251 213 aa12.39□□□□□ -0.43
PTPRO-202ENST00000348962 DERL1Q9BUN8 251 aa12.39□□□□□ -0.43
PTPRO-202ENST00000348962 NHP2Q9NX24 153 aaKnown RBP12.38□□□□□ -0.43
PTPRO-202ENST00000348962 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
PTPRO-202ENST00000348962 TYMSP04818 313 aa12.38□□□□□ -0.43
PTPRO-202ENST00000348962 DKK1O94907 266 aa12.38□□□□□ -0.43
PTPRO-202ENST00000348962 Q86TA4 180 aa12.38□□□□□ -0.43
PTPRO-202ENST00000348962 C10orf126Q8N4M7 172 aa12.38□□□□□ -0.43
PTPRO-202ENST00000348962 GRNP28799 593 aaKnown RBP12.38□□□□□ -0.43
PTPRO-202ENST00000348962 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
PTPRO-202ENST00000348962 TRPT1Q86TN4 253 aaKnown RBP12.37□□□□□ -0.43
PTPRO-202ENST00000348962 SPCS1Q9Y6A9 102 aa12.37□□□□□ -0.43
PTPRO-202ENST00000348962 CFPP27918 469 aa12.37□□□□□ -0.43
PTPRO-202ENST00000348962 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
PTPRO-202ENST00000348962 YLPM1P49750 1951 aaKnown RBP12.37□□□□□ -0.43
PTPRO-202ENST00000348962 HIVEP2P31629 2446 aa12.37□□□□□ -0.43
PTPRO-202ENST00000348962 OTOGLQ3ZCN5 2332 aa12.37□□□□□ -0.43
PTPRO-202ENST00000348962 PIEZO1Q92508 2521 aa12.37□□□□□ -0.43
PTPRO-202ENST00000348962 TSSC4Q9Y5U2 329 aaPredicted RBP12.37□□□□□ -0.43
PTPRO-202ENST00000348962 H3BUA1 57 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 ATRAIDQ6UW56 229 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 LY6G5BQ8NDX9 201 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 SPOCK3Q9BQ16 436 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 EREGO14944 169 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 NUP35Q8NFH5 326 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 A0A1B0GUS0 222 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 OR2K2Q8NGT1 345 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 LAMTOR2Q9Y2Q5 125 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 KNCNA6PVL3 124 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 C22orf46C9J442 243 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 M0R2P5 195 aa12.36□□□□□ -0.43
PTPRO-202ENST00000348962 SSBP2P81877 361 aaPredicted RBP12.36□□□□□ -0.43
PTPRO-202ENST00000348962 A8MWV9 139 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 CDKN1BP46527 198 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 IGHV1OR15-1A0A075B7D0 117 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 GAGE12JA6NER3 117 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 PFN1P07737 140 aaKnown RBP12.35□□□□□ -0.43
PTPRO-202ENST00000348962 GAGE1Q13065 139 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 GAGE4Q13068 117 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 GAGE5Q13069 117 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 GAGE13Q4V321 117 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 LINC00518Q8N0U6 118 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 DEFB104AQ8WTQ1 72 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 ZSWIM8A7E2V4 1837 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 IGHV2-70P01814 119 aa12.35□□□□□ -0.43
PTPRO-202ENST00000348962 CSPG4Q6UVK1 2322 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.34□□□□□ -0.43
PTPRO-202ENST00000348962 DOCK9Q9BZ29 2069 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 F8WEM9 126 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 C8orf86Q6ZUL3 223 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 PTPN13Q12923 2485 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
PTPRO-202ENST00000348962 ZNF561-AS1K7EIQ3 104 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 IGHV4-59P01825 116 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 AZU1P20160 251 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 TRBV25-1A0A075B6N4 114 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 C15orf65H3BRN8 121 aa12.34□□□□□ -0.43
PTPRO-202ENST00000348962 TRBV19A0A075B6N1 114 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST1H2BKO60814 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 GAGE7O76087 117 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST1H2BJP06899 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 GAGE12FP0CL80 117 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 GAGE12GP0CL81 117 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 GAGE12IP0CL82 117 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST1H2BOP23527 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST1H2BBP33778 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST1H2BDP58876 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST1H2BCP62807 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST2H2BEQ16778 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST1H2BHQ93079 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 RMI2Q96E14 147 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST1H2BNQ99877 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 HIST1H2BMQ99879 126 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 ERG28Q9UKR5 140 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 MYMXA0A1B0GTQ4 84 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 IGHV4-39P01824 125 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 CFHR3Q02985 330 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 SFTA2Q6UW10 78 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 TMEM75Q8N9X5 138 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 MYO18BQ8IUG5 2567 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 SIP14410 1827 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 IGHV4-61A0A0C4DH41 118 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 PRIMA1Q86XR5 153 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 MMP23AO75900 390 aa12.33□□□□□ -0.44
PTPRO-202ENST00000348962 RSPO1Q2MKA7 263 aaPredicted RBP12.32□□□□□ -0.44
PTPRO-202ENST00000348962 C1orf147Q96MC9 270 aaPredicted RBP12.32□□□□□ -0.44
PTPRO-202ENST00000348962 KIAA1671Q9BY89 1806 aa12.32□□□□□ -0.44
PTPRO-202ENST00000348962 CDK2AP2O75956 126 aa12.32□□□□□ -0.44
PTPRO-202ENST00000348962 AMN1Q8IY45 258 aa12.32□□□□□ -0.44
PTPRO-202ENST00000348962 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
PTPRO-202ENST00000348962 IGHV7-4-1A0A0J9YVY3 117 aa12.32□□□□□ -0.44
PTPRO-202ENST00000348962 KLK9Q9UKQ9 250 aa12.32□□□□□ -0.44
PTPRO-202ENST00000348962 H3BUT2 72 aa12.32□□□□□ -0.44
PTPRO-202ENST00000348962 WT1-ASQ06250 92 aa12.32□□□□□ -0.44
PTPRO-202ENST00000348962 SRSF4Q08170 494 aaKnown RBP12.32□□□□□ -0.44
PTPRO-202ENST00000348962 HAPLN4Q86UW8 402 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms