RNA–Protein interactions for RNA: ENST00000348161.8

TOM1L1-201, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-201ENST00000348161 NKX2-5P52952 324 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-201ENST00000348161 DEFB1P60022 68 aa11.3□□□□□ -0.6
TOM1L1-201ENST00000348161 FAM74A1Q5RGS3 127 aa11.3□□□□□ -0.6
TOM1L1-201ENST00000348161 EXOC3-AS1Q8N2X6 119 aa11.3□□□□□ -0.6
TOM1L1-201ENST00000348161 ZNF705FA8MVS1 300 aaPredicted RBP11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 CA1P00915 261 aaPredicted RBP11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 CSN1S1P47710 185 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 ICAM4Q14773 271 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 Q6ZWC4 215 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 OR8A1Q8NGG7 326 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 OR10J6PQ8NGY7 276 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 MRPL53Q96EL3 112 aaKnown RBP11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 TMEM167BQ9NRX6 74 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 PPP1R14DQ9NXH3 145 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 RAB5CP51148 216 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 HIST1H1AQ02539 215 aaPredicted RBP11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 DPPA3Q6W0C5 159 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 FAM213BQ8TBF2 198 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 PHYHIPLQ96FC7 376 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 TM2D3Q9BRN9 247 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
TOM1L1-201ENST00000348161 GCHFRP30047 84 aa11.28□□□□□ -0.6
TOM1L1-201ENST00000348161 CNN1P51911 297 aaKnown RBP11.28□□□□□ -0.6
TOM1L1-201ENST00000348161 CLUHP3Q96NS8 147 aa11.28□□□□□ -0.6
TOM1L1-201ENST00000348161 Q9H3A6 140 aa11.28□□□□□ -0.6
TOM1L1-201ENST00000348161 M0R3E3 92 aa11.27□□□□□ -0.6
TOM1L1-201ENST00000348161 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.6
TOM1L1-201ENST00000348161 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.6
TOM1L1-201ENST00000348161 FHITP49789 147 aa11.27□□□□□ -0.6
TOM1L1-201ENST00000348161 ZNF726P1Q15940 193 aa11.27□□□□□ -0.6
TOM1L1-201ENST00000348161 CMTM2Q8TAZ6 248 aa11.27□□□□□ -0.6
TOM1L1-201ENST00000348161 MAP1LC3B2A6NCE7 125 aa11.27□□□□□ -0.61
TOM1L1-201ENST00000348161 DEFB135Q30KP9 77 aa11.27□□□□□ -0.61
TOM1L1-201ENST00000348161 SSX7Q7RTT5 188 aa11.27□□□□□ -0.61
TOM1L1-201ENST00000348161 RXFP4Q8TDU9 374 aa11.27□□□□□ -0.61
TOM1L1-201ENST00000348161 SFT2D1Q8WV19 159 aa11.27□□□□□ -0.61
TOM1L1-201ENST00000348161 RCHY1Q96PM5 261 aa11.27□□□□□ -0.61
TOM1L1-201ENST00000348161 MAP1LC3BQ9GZQ8 125 aa11.27□□□□□ -0.61
TOM1L1-201ENST00000348161 PGPA6NDG6 321 aa11.26□□□□□ -0.61
TOM1L1-201ENST00000348161 H2AFB1P0C5Y9 115 aa11.26□□□□□ -0.61
TOM1L1-201ENST00000348161 OTORQ9NRC9 128 aa11.26□□□□□ -0.61
TOM1L1-201ENST00000348161 SPRY2O43597 315 aa11.25□□□□□ -0.61
TOM1L1-201ENST00000348161 FGF8P55075 233 aaPredicted RBP11.25□□□□□ -0.61
TOM1L1-201ENST00000348161 TP53TG1Q9Y2A0 90 aa11.25□□□□□ -0.61
TOM1L1-201ENST00000348161 PRAC2D3DTV9 90 aa11.25□□□□□ -0.61
TOM1L1-201ENST00000348161 TEX46H3BTG2 121 aa11.25□□□□□ -0.61
TOM1L1-201ENST00000348161 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
TOM1L1-201ENST00000348161 SUN5Q8TC36 379 aa11.25□□□□□ -0.61
TOM1L1-201ENST00000348161 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
TOM1L1-201ENST00000348161 XCL2Q9UBD3 114 aa11.25□□□□□ -0.61
TOM1L1-201ENST00000348161 PRKDCP78527 4128 aaKnown RBP11.24□□□□□ -0.61
TOM1L1-201ENST00000348161 SULT1A2P50226 295 aa11.24□□□□□ -0.61
TOM1L1-201ENST00000348161 MBD3L1Q8WWY6 194 aa11.24□□□□□ -0.61
TOM1L1-201ENST00000348161 RNF183Q96D59 192 aa11.24□□□□□ -0.61
TOM1L1-201ENST00000348161 TMPRSS5Q9H3S3 457 aa11.24□□□□□ -0.61
TOM1L1-201ENST00000348161 U3KQK5 164 aa11.24□□□□□ -0.61
TOM1L1-201ENST00000348161 FXYD7P58549 80 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 LINC00477Q96M19 166 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 NKX6-2Q9C056 277 aaPredicted RBP11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 BOLA1Q9Y3E2 137 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 A0A1W2PRE2 83 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 AMBPP02760 352 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 TMEM78Q5T7P6 136 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 RARRES2Q99969 163 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 OVOL2Q9BRP0 275 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 RETNQ9HD89 108 aa11.23□□□□□ -0.61
TOM1L1-201ENST00000348161 A8MTW9 85 aa11.22□□□□□ -0.61
TOM1L1-201ENST00000348161 SLC25A5P05141 298 aaKnown RBP11.22□□□□□ -0.61
TOM1L1-201ENST00000348161 GIG44P09565 113 aaPredicted RBP11.22□□□□□ -0.61
TOM1L1-201ENST00000348161 TSPOP30536 169 aa11.22□□□□□ -0.61
TOM1L1-201ENST00000348161 ARL6IP6Q8N6S5 226 aa11.22□□□□□ -0.61
TOM1L1-201ENST00000348161 RPH3ALQ9UNE2 315 aa11.22□□□□□ -0.61
TOM1L1-201ENST00000348161 A0A1B0GV50 99 aa11.21□□□□□ -0.61
TOM1L1-201ENST00000348161 BOLA2-SMG1P6H3BVE0 249 aa11.21□□□□□ -0.61
TOM1L1-201ENST00000348161 CDKN1BP46527 198 aa11.21□□□□□ -0.61
TOM1L1-201ENST00000348161 UBE2G2P60604 165 aa11.21□□□□□ -0.61
TOM1L1-201ENST00000348161 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
TOM1L1-201ENST00000348161 AMTNQ6UX39 209 aa11.21□□□□□ -0.61
TOM1L1-201ENST00000348161 ALKAL2Q6UX46 152 aa11.21□□□□□ -0.61
TOM1L1-201ENST00000348161 C5orf17Q8NAS9 161 aa11.21□□□□□ -0.61
TOM1L1-201ENST00000348161 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 RBAKDNA6NC62 111 aa11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 ZNF705EA8MWA4 302 aaPredicted RBP11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 DIRC3C9JPN6 131 aa11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 K7EQM0 130 aa11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 M0R2Z0 102 aa11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 HBE1P02100 147 aa11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 OR11H2Q8NH07 326 aa11.21□□□□□ -0.62
TOM1L1-201ENST00000348161 IFNA7P01567 189 aa11.2□□□□□ -0.62
TOM1L1-201ENST00000348161 PPT1P50897 306 aa11.2□□□□□ -0.62
TOM1L1-201ENST00000348161 ERCC8Q13216 396 aa11.2□□□□□ -0.62
TOM1L1-201ENST00000348161 C9orf47Q6ZRZ4 202 aa11.2□□□□□ -0.62
TOM1L1-201ENST00000348161 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
TOM1L1-201ENST00000348161 SERTM2A0A1B0GWG4 89 aa11.19□□□□□ -0.62
TOM1L1-201ENST00000348161 CST9LP1Q5W188 147 aa11.19□□□□□ -0.62
TOM1L1-201ENST00000348161 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms