RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 MBD3L2Q8NHZ7 208 aaPredicted RBP8.4□□□□□ -1.07
SMG7-201ENST00000347615 NEU4Q8WWR8 484 aaPredicted RBP8.39□□□□□ -1.07
SMG7-201ENST00000347615 C20orf144Q9BQM9 153 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 LY96Q9Y6Y9 160 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 WT1P19544 449 aaPredicted RBP8.39□□□□□ -1.07
SMG7-201ENST00000347615 MALRD1Q5VYJ5 2156 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 TRAV41A0A0B4J266 112 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 IGHG3P01860 377 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 CIRBPQ14011 172 aaKnown RBP8.39□□□□□ -1.07
SMG7-201ENST00000347615 UTF1Q5T230 341 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 MS4A6AQ9H2W1 248 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 ZNF106Q9H2Y7 1883 aaKnown RBP8.39□□□□□ -1.07
SMG7-201ENST00000347615 SIGMAR1Q99720 223 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 CSTL1Q9H114 145 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 TNFRSF6BO95407 300 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 IGLV2-14P01704 120 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 CD28P10747 220 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 YPEL3P61236 119 aaPredicted RBP8.39□□□□□ -1.07
SMG7-201ENST00000347615 CST9LQ9H4G1 147 aa8.39□□□□□ -1.07
SMG7-201ENST00000347615 SEC11AP67812 179 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 SLC50A1Q9BRV3 221 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 CHAC1Q9BUX1 264 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 TP73-AS1Q9UF72 201 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 KNCNA6PVL3 124 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 FXYD5Q96DB9 178 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 DKK1O94907 266 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 HTN3P15516 51 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 TEX36Q5VZQ5 186 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 VGLL1Q99990 258 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 EML6Q6ZMW3 1958 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 ADAMTS9Q9P2N4 1935 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 TDGF1P13385 188 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 UCNP55089 124 aa8.38□□□□□ -1.07
SMG7-201ENST00000347615 PCNX2A6NKB5 2137 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 H3BUX3 64 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 TMEM155Q4W5P6 130 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 ADAMTSL5Q6ZMM2 481 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 PHLDA1Q8WV24 401 aaPredicted RBP8.37□□□□□ -1.07
SMG7-201ENST00000347615 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 NPFFR1Q9GZQ6 430 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 PGPEP1Q9NXJ5 209 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 BDP1A6H8Y1 2624 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 OBSL1O75147 1896 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 C5orf42Q9H799 3197 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 MRPL51Q4U2R6 128 aaKnown RBP8.37□□□□□ -1.07
SMG7-201ENST00000347615 BPESC1Q9GZL8 116 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 DKK2Q9UBU2 259 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 SAA4P35542 130 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 RASL11AQ6T310 242 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 TANC2Q9HCD6 1990 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 ATP6V0E1O15342 81 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
SMG7-201ENST00000347615 GRNP28799 593 aaKnown RBP8.37□□□□□ -1.07
SMG7-201ENST00000347615 EFNA4P52798 201 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 IGLV3-9A0A075B6K5 115 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 PAX2Q02962 417 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 ZNF876PQ49A33 203 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 ZNF833PQ6ZTB9 187 aa8.37□□□□□ -1.07
SMG7-201ENST00000347615 CREBBPQ92793 2442 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 NPYP01303 97 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 LOXP28300 417 aaPredicted RBP8.36□□□□□ -1.07
SMG7-201ENST00000347615 ZNF625Q96I27 306 aaPredicted RBP8.36□□□□□ -1.07
SMG7-201ENST00000347615 OCIAD2Q56VL3 154 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 NUP37Q8NFH4 326 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 TRGV2A0A075B6R0 118 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 SPXQ9BT56 116 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 SIGLEC8Q9NYZ4 499 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 E7EUB6 86 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 ESDP10768 282 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 FAM120AOSQ5T036 256 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 AMTNQ6UX39 209 aa8.36□□□□□ -1.07
SMG7-201ENST00000347615 TRBV19A0A075B6N1 114 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 TRAV12-2A0A075B6T6 113 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 PPBPP02775 128 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 C10orf126Q8N4M7 172 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 KLK9Q9UKQ9 250 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 NDUFS7O75251 213 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 TEX43Q6ZNM6 134 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 ODF3L1Q8IXM7 274 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 MRPS16Q9Y3D3 137 aaKnown RBP8.35□□□□□ -1.07
SMG7-201ENST00000347615 OVOL3O00110 214 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 DNAL4O96015 105 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 CKS1BP61024 79 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 ORMDL2Q53FV1 153 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 FAM215AQ9Y5M1 114 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 PRR20EP86478 221 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 PRR20CP86479 221 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 PRR20DP86480 221 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 PRR20BP86481 221 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 PRR20AP86496 221 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 CRIP3Q6Q6R5 217 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 Q8TCH9 128 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 UBE2E2Q96LR5 201 aa8.35□□□□□ -1.07
SMG7-201ENST00000347615 CCL25O15444 150 aa8.34□□□□□ -1.07
SMG7-201ENST00000347615 RNASE13Q5GAN3 156 aaKnown RBP8.34□□□□□ -1.07
SMG7-201ENST00000347615 ANAPC13Q9BS18 74 aa8.34□□□□□ -1.07
SMG7-201ENST00000347615 OR9G4Q8NGQ1 327 aa8.34□□□□□ -1.07
SMG7-201ENST00000347615 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms