RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OR7C2O60412 319 aa11.36□□□□□ -0.59
TSPAN4-201ENST00000346501 GIPP09681 153 aaPredicted RBP11.36□□□□□ -0.59
TSPAN4-201ENST00000346501 GCSAMLQ5JQS6 135 aa11.36□□□□□ -0.59
TSPAN4-201ENST00000346501 C1orf158Q8N1D5 194 aa11.36□□□□□ -0.59
TSPAN4-201ENST00000346501 INO80EQ8NBZ0 244 aaPredicted RBP11.36□□□□□ -0.59
TSPAN4-201ENST00000346501 LINC01587Q99440 93 aa11.36□□□□□ -0.59
TSPAN4-201ENST00000346501 PAXXQ9BUH6 204 aa11.36□□□□□ -0.59
TSPAN4-201ENST00000346501 PARD6GQ9BYG4 376 aaPredicted RBP11.36□□□□□ -0.59
TSPAN4-201ENST00000346501 A0A1W2PPV4 95 aa11.35□□□□□ -0.59
TSPAN4-201ENST00000346501 IGLL5B9A064 214 aa11.35□□□□□ -0.59
TSPAN4-201ENST00000346501 NBEAP1P0C6P0 100 aa11.35□□□□□ -0.59
TSPAN4-201ENST00000346501 PYYP10082 97 aa11.35□□□□□ -0.59
TSPAN4-201ENST00000346501 LEPP41159 167 aa11.35□□□□□ -0.59
TSPAN4-201ENST00000346501 ACOT6Q3I5F7 207 aaPredicted RBP11.35□□□□□ -0.59
TSPAN4-201ENST00000346501 Q6ZTC4 211 aa11.35□□□□□ -0.59
TSPAN4-201ENST00000346501 MIR17HGQ75NE6 70 aa11.35□□□□□ -0.59
TSPAN4-201ENST00000346501 BAP18Q8IXM2 172 aa11.35□□□□□ -0.59
TSPAN4-201ENST00000346501 TRAV12-2A0A075B6T6 113 aa11.34□□□□□ -0.59
TSPAN4-201ENST00000346501 CSN1S1P47710 185 aa11.34□□□□□ -0.59
TSPAN4-201ENST00000346501 KHDC3LQ587J8 217 aa11.34□□□□□ -0.59
TSPAN4-201ENST00000346501 RPP25LQ8N5L8 163 aaKnown RBP11.34□□□□□ -0.59
TSPAN4-201ENST00000346501 RNF141Q8WVD5 230 aa11.34□□□□□ -0.59
TSPAN4-201ENST00000346501 LINC00476Q8WZB0 136 aa11.34□□□□□ -0.59
TSPAN4-201ENST00000346501 C20orf144Q9BQM9 153 aa11.34□□□□□ -0.59
TSPAN4-201ENST00000346501 NIPSNAP3BQ9BS92 247 aa11.34□□□□□ -0.59
TSPAN4-201ENST00000346501 SLC25A2Q9BXI2 301 aa11.34□□□□□ -0.59
TSPAN4-201ENST00000346501 TENM2Q9NT68 2774 aa11.33□□□□□ -0.6
TSPAN4-201ENST00000346501 DEFB131BA0A096LNP1 70 aa11.33□□□□□ -0.6
TSPAN4-201ENST00000346501 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
TSPAN4-201ENST00000346501 CELA1Q9UNI1 258 aa11.33□□□□□ -0.6
TSPAN4-201ENST00000346501 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
TSPAN4-201ENST00000346501 DNAH7Q8WXX0 4024 aa11.33□□□□□ -0.6
TSPAN4-201ENST00000346501 ZNF705GA8MUZ8 300 aaPredicted RBP11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 H7BYZ3 331 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 CRXO43186 299 aaPredicted RBP11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 HTN1P15515 57 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 M6PRP20645 277 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 TAS2R60P59551 318 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 DAD1P61803 113 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 UBE2L3P68036 154 aaKnown RBP11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 ICAM4Q14773 271 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 C12orf74Q32Q52 190 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 CCDC28AQ8IWP9 274 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 AQP10Q96PS8 301 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 ODF3Q96PU9 254 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 DKK2Q9UBU2 259 aa11.32□□□□□ -0.6
TSPAN4-201ENST00000346501 BORCS7-ASMTA0A0B4J1R7 106 aa11.31□□□□□ -0.6
TSPAN4-201ENST00000346501 PRAC2D3DTV9 90 aa11.31□□□□□ -0.6
TSPAN4-201ENST00000346501 NPIPB6E9PJ23 425 aa11.31□□□□□ -0.6
TSPAN4-201ENST00000346501 OR10J4P0C629 311 aa11.31□□□□□ -0.6
TSPAN4-201ENST00000346501 FAM74A1Q5RGS3 127 aa11.31□□□□□ -0.6
TSPAN4-201ENST00000346501 TMEM78Q5T7P6 136 aa11.31□□□□□ -0.6
TSPAN4-201ENST00000346501 ZNF767PQ75MW2 155 aa11.31□□□□□ -0.6
TSPAN4-201ENST00000346501 LYPD1Q8N2G4 141 aa11.31□□□□□ -0.6
TSPAN4-201ENST00000346501 FAM167A-AS1Q96KT0 104 aa11.31□□□□□ -0.6
TSPAN4-201ENST00000346501 FXYD6-FXYD2A0A087WZ82 144 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 LYRM9A8MSI8 78 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 M0R3E3 92 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 NDUFB4O95168 129 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 MBP02144 154 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 OXA1LQ15070 435 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 LGALS9CQ6DKI2 356 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 FAM122CQ6P4D5 195 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 PQLC2Q6ZP29 291 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 ZNF493Q6ZR52 646 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 EXOC3-AS1Q8N2X6 119 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 OR2T35Q8NGX2 323 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 C16orf74Q96GX8 76 aa11.3□□□□□ -0.6
TSPAN4-201ENST00000346501 J3KRW8 73 aa11.29□□□□□ -0.6
TSPAN4-201ENST00000346501 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
TSPAN4-201ENST00000346501 HSD17B11Q8NBQ5 300 aa11.29□□□□□ -0.6
TSPAN4-201ENST00000346501 OR10G4Q8NGN3 311 aa11.29□□□□□ -0.6
TSPAN4-201ENST00000346501 OR10G9Q8NGN4 311 aa11.29□□□□□ -0.6
TSPAN4-201ENST00000346501 OR10G7Q8NGN6 311 aa11.29□□□□□ -0.6
TSPAN4-201ENST00000346501 FAM210BQ96KR6 192 aa11.29□□□□□ -0.6
TSPAN4-201ENST00000346501 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
TSPAN4-201ENST00000346501 WFDC1Q9HC57 220 aa11.29□□□□□ -0.6
TSPAN4-201ENST00000346501 IGHV4-4A0A075B6R2 117 aa11.28□□□□□ -0.6
TSPAN4-201ENST00000346501 HTN3P15516 51 aa11.28□□□□□ -0.6
TSPAN4-201ENST00000346501 RANP62826 216 aaKnown RBP11.28□□□□□ -0.6
TSPAN4-201ENST00000346501 SERF2P84101 59 aa11.28□□□□□ -0.6
TSPAN4-201ENST00000346501 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
TSPAN4-201ENST00000346501 RXFP4Q8TDU9 374 aa11.28□□□□□ -0.6
TSPAN4-201ENST00000346501 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
TSPAN4-201ENST00000346501 PSMG3Q9BT73 122 aaPredicted RBP11.28□□□□□ -0.6
TSPAN4-201ENST00000346501 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
TSPAN4-201ENST00000346501 GPX1P07203 203 aa11.27□□□□□ -0.61
TSPAN4-201ENST00000346501 CT45A10P0DMU9 189 aa11.27□□□□□ -0.61
TSPAN4-201ENST00000346501 GFI1BQ5VTD9 330 aa11.27□□□□□ -0.61
TSPAN4-201ENST00000346501 TMEM263Q8WUH6 116 aaKnown RBP11.27□□□□□ -0.61
TSPAN4-201ENST00000346501 GNPNAT1Q96EK6 184 aaPredicted RBP11.27□□□□□ -0.61
TSPAN4-201ENST00000346501 PYGO2Q9BRQ0 406 aa11.27□□□□□ -0.61
TSPAN4-201ENST00000346501 Q9H3A6 140 aa11.27□□□□□ -0.61
TSPAN4-201ENST00000346501 TRAV12-3A0A0B4J271 114 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 SNURFLB1AK76 121 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 DEFB130BP0DP73 79 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 DEFB130AP0DP74 79 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 CDC34P49427 236 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms