RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SMIM15Q7Z3B0 74 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 TRAV41A0A0B4J266 112 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 APOHP02749 345 aaPredicted RBP10.47□□□□□ -0.73
CASC4-202ENST00000345795 TMEM183BQ1AE95 376 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 TMEM136Q6ZRR5 245 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 AMN1Q8IY45 258 aa10.47□□□□□ -0.73
CASC4-202ENST00000345795 LOC102724200A0A096LPH7 203 aaPredicted RBP10.46□□□□□ -0.73
CASC4-202ENST00000345795 LEPROTL1O95214 131 aa10.46□□□□□ -0.73
CASC4-202ENST00000345795 TNFRSF14Q92956 283 aa10.46□□□□□ -0.73
CASC4-202ENST00000345795 LINC00477Q96M19 166 aa10.46□□□□□ -0.73
CASC4-202ENST00000345795 IGHV7-81A0A0B4J1V7 117 aa10.46□□□□□ -0.73
CASC4-202ENST00000345795 IGHV2-70DA0A0C4DH43 119 aa10.46□□□□□ -0.73
CASC4-202ENST00000345795 ZNF688P0C7X2 276 aa10.46□□□□□ -0.73
CASC4-202ENST00000345795 DMRT1Q9Y5R6 373 aa10.46□□□□□ -0.73
CASC4-202ENST00000345795 IZUMO1RA6ND01 250 aa10.46□□□□□ -0.74
CASC4-202ENST00000345795 FOXL1Q12952 345 aa10.46□□□□□ -0.74
CASC4-202ENST00000345795 DEFB136Q30KP8 78 aa10.46□□□□□ -0.74
CASC4-202ENST00000345795 C10orf99Q6UWK7 81 aa10.46□□□□□ -0.74
CASC4-202ENST00000345795 EEF1AKMT3Q96AZ1 226 aa10.46□□□□□ -0.74
CASC4-202ENST00000345795 ZC2HC1AQ96GY0 325 aa10.46□□□□□ -0.74
CASC4-202ENST00000345795 OSTCQ9NRP0 149 aa10.46□□□□□ -0.74
CASC4-202ENST00000345795 CENPVL3A0A0U1RRI6 287 aa10.45□□□□□ -0.74
CASC4-202ENST00000345795 LYZL1Q6UWQ5 148 aa10.45□□□□□ -0.74
CASC4-202ENST00000345795 LINC00311Q8N616 119 aa10.45□□□□□ -0.74
CASC4-202ENST00000345795 GRAMD2BQ96HH9 432 aa10.45□□□□□ -0.74
CASC4-202ENST00000345795 FBN2P35556 2912 aa10.45□□□□□ -0.74
CASC4-202ENST00000345795 A0A1B0GUT8 65 aa10.45□□□□□ -0.74
CASC4-202ENST00000345795 IGHV4-59P01825 116 aa10.45□□□□□ -0.74
CASC4-202ENST00000345795 AARDQ4LEZ3 155 aa10.45□□□□□ -0.74
CASC4-202ENST00000345795 SP5Q6BEB4 398 aaPredicted RBP10.45□□□□□ -0.74
CASC4-202ENST00000345795 Q6ZS46 218 aa10.45□□□□□ -0.74
CASC4-202ENST00000345795 GPX1P07203 203 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 RNASE4P34096 147 aaKnown RBP10.44□□□□□ -0.74
CASC4-202ENST00000345795 TAS2R60P59551 318 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 RIGQ13278 110 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 Q6ZWC4 215 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 PRAC2D3DTV9 90 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 I3L2K1 104 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 NMUP48645 174 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 DPF1Q92782 380 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 NIT1Q86X76 327 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 WIPF2Q8TF74 440 aaPredicted RBP10.44□□□□□ -0.74
CASC4-202ENST00000345795 OTORQ9NRC9 128 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 MSRB1Q9NZV6 116 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 ITPR2Q14571 2701 aa10.44□□□□□ -0.74
CASC4-202ENST00000345795 H3BVH4 76 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 PAX8Q06710 450 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 JOSD1Q15040 202 aaPredicted RBP10.43□□□□□ -0.74
CASC4-202ENST00000345795 TSKUQ8WUA8 353 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 C20orf202A1L168 122 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 CBY3A6NI87 242 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 M0R1W7 72 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 RBPMS2Q6ZRY4 209 aaKnown RBP10.43□□□□□ -0.74
CASC4-202ENST00000345795 Q86TA4 180 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 AGRNO00468 2067 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 TRAV26-2A0A0B4J265 109 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 SCGB2A2Q13296 93 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 SHANK2-AS3Q9BTD1 123 aa10.43□□□□□ -0.74
CASC4-202ENST00000345795 TRBV19A0A075B6N1 114 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 hDV102S1A0JD36 115 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 D6R8Y8 96 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 ZNF25P17030 456 aaPredicted RBP10.42□□□□□ -0.74
CASC4-202ENST00000345795 LINC00173Q6ZV60 143 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 FANCD2OSQ96PS1 177 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 CD99P14209 185 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 UBE2E1P51965 193 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 Q6ZVH6 145 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 Q8N9W7 124 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 FMC1Q96HJ9 113 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 TMEM208Q9BTX3 173 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 TRAV30A0A087WSZ9 112 aa10.42□□□□□ -0.74
CASC4-202ENST00000345795 ZNF324O75467 553 aaPredicted RBP10.42□□□□□ -0.74
CASC4-202ENST00000345795 ATP5IP56385 69 aaPredicted RBP10.42□□□□□ -0.74
CASC4-202ENST00000345795 SH2D1AO60880 128 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 MT-ND6P03923 174 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 MSMBP08118 114 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 PVRIGQ6DKI7 326 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 OR4X2Q8NGF9 303 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 NAA38Q9BRA0 125 aaKnown RBP10.41□□□□□ -0.74
CASC4-202ENST00000345795 C3orf79P0CE67 100 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 Q6ZQT7 251 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 IGHV3-73A0A0B4J1V6 119 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 SYNJ2BPP57105 145 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 SRSF2Q01130 221 aaKnown RBP10.41□□□□□ -0.74
CASC4-202ENST00000345795 NCOR1P1Q9H4R4 102 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 AP5S1Q9NUS5 200 aa10.41□□□□□ -0.74
CASC4-202ENST00000345795 A0A1W2PS18 150 aa10.4□□□□□ -0.74
CASC4-202ENST00000345795 CTSGP08311 255 aa10.4□□□□□ -0.74
CASC4-202ENST00000345795 GP9P14770 177 aa10.4□□□□□ -0.74
CASC4-202ENST00000345795 GATA1P15976 413 aaPredicted RBP10.4□□□□□ -0.74
CASC4-202ENST00000345795 PAFAH1B2P68402 229 aa10.4□□□□□ -0.74
CASC4-202ENST00000345795 TRAV12-2A0A075B6T6 113 aa10.4□□□□□ -0.74
CASC4-202ENST00000345795 EREGO14944 169 aa10.4□□□□□ -0.74
CASC4-202ENST00000345795 LMO4P61968 165 aa10.4□□□□□ -0.74
CASC4-202ENST00000345795 FER1L6-AS1Q8NA97 138 aa10.4□□□□□ -0.74
CASC4-202ENST00000345795 IGHV1-69DA0A0B4J2H0 117 aa10.4□□□□□ -0.75
CASC4-202ENST00000345795 IGHV1-69P01742 117 aa10.4□□□□□ -0.75
CASC4-202ENST00000345795 UNQ9165/PRO28630Q6UXU0 137 aa10.4□□□□□ -0.75
CASC4-202ENST00000345795 PRDM13Q9H4Q3 707 aa10.4□□□□□ -0.75
CASC4-202ENST00000345795 C18orf32Q8TCD1 76 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms