RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 STXBP6Q8NFX7 210 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 RNF125Q96EQ8 232 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 IMMP2LQ96T52 175 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 SRD5A3Q9H8P0 318 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 BEX4Q9NWD9 120 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-202ENST00000345734 WI2-2373I1.2A0A1W2PRP0 233 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 A6NDX4 124 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 SCGB1D1O95968 90 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 YPEL3P61236 119 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-202ENST00000345734 LOXL1Q08397 574 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-202ENST00000345734 C15orf32Q32M92 178 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 CENPWQ5EE01 88 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 MS4A10Q96PG2 267 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 CHRDL1Q9BU40 450 aa7.18□□□□□ -1.26
ATG4A-202ENST00000345734 C9JCJ5 164 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 M0QZ24 198 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 PFN1P07737 140 aaKnown RBP7.17□□□□□ -1.26
ATG4A-202ENST00000345734 CTSGP08311 255 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 IGHV4-31P0DP07 118 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 MYCNOSP40205 109 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 GALR1P47211 349 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 LINC00310P59036 64 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 GNG5P63218 68 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 SLAQ13239 276 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 BATFQ16520 125 aa7.17□□□□□ -1.26
ATG4A-202ENST00000345734 TRBV9A0A0B4J1U6 114 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 IGHV3-35A0A0C4DH35 117 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 H3BRN7 92 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 FCGR2BP31994 310 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-202ENST00000345734 TFPI2P48307 235 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 GNG4P50150 75 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 KLK9Q2XQG4 91 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 SAMD13Q5VXD3 122 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 ZNF502Q8TBZ5 544 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 VN1R17PQ8TDU5 208 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 SFRP2Q96HF1 295 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 ZNF414Q96IQ9 312 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 SHANK2-AS3Q9BTD1 123 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 ZNF586Q9NXT0 402 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 KLK9Q9UKQ9 250 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 GCN1Q92616 2671 aaKnown RBP7.16□□□□□ -1.26
ATG4A-202ENST00000345734 PDZD2O15018 2839 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 ANK3Q12955 4377 aaKnown RBP7.16□□□□□ -1.26
ATG4A-202ENST00000345734 IGHV3OR16-8A0A075B7F1 116 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 TRAV41A0A0B4J266 112 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 TRAV34A0A0B4J273 112 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 PGPA6NDG6 321 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 C9orf118A6NHY6 69 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 J3QKU1 62 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 PEX7O00628 323 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 MED14OSP0DP75 135 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 GPR183P32249 361 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 BLCAPP62952 87 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 DEFB112Q30KQ8 113 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 KRTAP1-3Q8IUG1 177 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 LRRC75A-AS1Q8N1F1 130 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 MTURNQ8N3F0 131 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 Q8N3U1 123 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 OR4B1Q8NGF8 309 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 IGF2BP2-AS1Q96M15 143 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 Q96MF0 132 aa7.16□□□□□ -1.26
ATG4A-202ENST00000345734 A0A087WWL8 130 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 B5MCH6 92 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 NPIPB6E9PJ23 425 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 IGLV2-8P01709 118 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 SLC25A5P05141 298 aaKnown RBP7.15□□□□□ -1.26
ATG4A-202ENST00000345734 CLEC3BP05452 202 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 NHLRC2Q8NBF2 726 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 DPF1Q92782 380 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 C17orf77Q96MU5 243 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 OR5B12Q96R08 314 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 Q9H3A6 140 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 TMEM14CQ9P0S9 112 aa7.15□□□□□ -1.26
ATG4A-202ENST00000345734 FLNAP21333 2647 aaKnown RBP7.15□□□□□ -1.26
ATG4A-202ENST00000345734 J3QLI3 93 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 IGHV4-59P01825 116 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 HIST1H1EP10412 219 aaKnown RBP7.15□□□□□ -1.27
ATG4A-202ENST00000345734 CD99P14209 185 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 FAM3BP58499 235 aaPredicted RBP7.15□□□□□ -1.27
ATG4A-202ENST00000345734 CLEC19AQ6UXS0 136 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 SGK494Q96LW2 274 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 ATP6V0BQ99437 205 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 VAMP8Q9BV40 100 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 UQCR10Q9UDW1 63 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 EPDR1Q9UM22 224 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 LY96Q9Y6Y9 160 aa7.15□□□□□ -1.27
ATG4A-202ENST00000345734 SLC17A3O00476 420 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 ISLRO14498 428 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 MRPS12O15235 138 aaKnown RBP7.14□□□□□ -1.27
ATG4A-202ENST00000345734 IGHG2P01859 326 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 IGLC2P0DOY2 106 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 PRB4P10163 310 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-202ENST00000345734 CRIP2P52943 208 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-202ENST00000345734 S100A7AQ86SG5 101 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 EXOC3-AS1Q8N2X6 119 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 SYT8Q8NBV8 401 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 OR10G8Q8NGN5 311 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 PYGO2Q9BRQ0 406 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 GNB4Q9HAV0 340 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms