RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 BCL2P10415 239 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 ATP5G3P48201 142 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 EXOC3-AS1Q8N2X6 119 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 SUN5Q8TC36 379 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 FAM210AQ96ND0 272 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 TM2D3Q9BRN9 247 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 DNASE2O00115 360 aaPredicted RBP10.25□□□□□ -0.77
TPM4-202ENST00000344824 NDUFB4O95168 129 aa10.25□□□□□ -0.77
TPM4-202ENST00000344824 HLA-DMBP28068 263 aa10.25□□□□□ -0.77
TPM4-202ENST00000344824 SRSF3P84103 164 aaKnown RBP10.25□□□□□ -0.77
TPM4-202ENST00000344824 FAM90A2PQ658T7 463 aa10.25□□□□□ -0.77
TPM4-202ENST00000344824 C16orf92Q96LL3 132 aa10.25□□□□□ -0.77
TPM4-202ENST00000344824 Q9H3A6 140 aa10.25□□□□□ -0.77
TPM4-202ENST00000344824 NRN1Q9NPD7 142 aa10.25□□□□□ -0.77
TPM4-202ENST00000344824 RPH3ALQ9UNE2 315 aa10.25□□□□□ -0.77
TPM4-202ENST00000344824 RBMY1BA6NDE4 496 aaKnown RBP10.24□□□□□ -0.77
TPM4-202ENST00000344824 PGPA6NDG6 321 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 RBMY1EA6NEQ0 496 aaKnown RBP10.24□□□□□ -0.77
TPM4-202ENST00000344824 GGTLC3B5MD39 225 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 C11orf94C9JXX5 98 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 RBMY1DP0C7P1 496 aaKnown RBP10.24□□□□□ -0.77
TPM4-202ENST00000344824 SUMO1P63165 101 aaKnown RBP10.24□□□□□ -0.77
TPM4-202ENST00000344824 ICAM4Q14773 271 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 ZNF506Q5JVG8 444 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 SLC7A5P1Q8MH63 180 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 RNF182Q8N6D2 247 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 MS4A6AQ9H2W1 248 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 TREM1Q9NP99 234 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 VAX2Q9UIW0 290 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 A0A1W2PRE2 83 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 SLC25A5P05141 298 aaKnown RBP10.24□□□□□ -0.77
TPM4-202ENST00000344824 CEBPGP53567 150 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 ODF3L2Q3SX64 289 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 AAMDCQ9H7C9 122 aa10.24□□□□□ -0.77
TPM4-202ENST00000344824 ZNF331Q9NQX6 463 aaPredicted RBP10.24□□□□□ -0.77
TPM4-202ENST00000344824 DNAH7Q8WXX0 4024 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 LOC102724200A0A096LPH7 203 aaPredicted RBP10.23□□□□□ -0.77
TPM4-202ENST00000344824 CD5P06127 495 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 MEOX2P50222 304 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 GNG5P63218 68 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 PAFAH1B2P68402 229 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 PSG9Q00887 426 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 MEF2BQ02080 365 aaPredicted RBP10.23□□□□□ -0.77
TPM4-202ENST00000344824 PDE6HQ13956 83 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 PEA15Q15121 130 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 APRG1Q8IVJ8 170 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 LINC00052Q96N35 136 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 CITED4Q96RK1 184 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 SLC50A1Q9BRV3 221 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 OTORQ9NRC9 128 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 MED9Q9NWA0 146 aa10.23□□□□□ -0.77
TPM4-202ENST00000344824 TRAV8-2A0A0B4J237 113 aa10.22□□□□□ -0.77
TPM4-202ENST00000344824 SCO2A0A1W2PP80 73 aa10.22□□□□□ -0.77
TPM4-202ENST00000344824 RAB19A4D1S5 217 aa10.22□□□□□ -0.77
TPM4-202ENST00000344824 M0R3E3 92 aa10.22□□□□□ -0.77
TPM4-202ENST00000344824 RPL35AP18077 110 aaKnown RBP10.22□□□□□ -0.77
TPM4-202ENST00000344824 TAGLN2P37802 199 aaKnown RBP10.22□□□□□ -0.77
TPM4-202ENST00000344824 PMS2P11Q13670 270 aa10.22□□□□□ -0.77
TPM4-202ENST00000344824 FAM24BQ8N5W8 94 aa10.22□□□□□ -0.77
TPM4-202ENST00000344824 CMTM2Q8TAZ6 248 aa10.22□□□□□ -0.77
TPM4-202ENST00000344824 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
TPM4-202ENST00000344824 ARL2-SNX15V9GYD0 113 aa10.22□□□□□ -0.77
TPM4-202ENST00000344824 AGRNO00468 2067 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 ZNF705FA8MVS1 300 aaPredicted RBP10.21□□□□□ -0.78
TPM4-202ENST00000344824 C9JQL5 133 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 K7EQG2 157 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 SOCS3O14543 225 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 ZNF253O75346 499 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 ZNF688P0C7X2 276 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 ZNF124Q15973 351 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 LINC00322Q6ZN03 302 aaPredicted RBP10.21□□□□□ -0.78
TPM4-202ENST00000344824 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 DCANP1Q8TF63 244 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 MAP6D1Q9H9H5 199 aa10.21□□□□□ -0.78
TPM4-202ENST00000344824 ID1P41134 155 aa10.2□□□□□ -0.78
TPM4-202ENST00000344824 NDUFA5Q16718 116 aa10.2□□□□□ -0.78
TPM4-202ENST00000344824 ZNF738Q8NE65 137 aa10.2□□□□□ -0.78
TPM4-202ENST00000344824 ISLRO14498 428 aa10.19□□□□□ -0.78
TPM4-202ENST00000344824 SRP19P09132 144 aaKnown RBP10.19□□□□□ -0.78
TPM4-202ENST00000344824 CSN1S1P47710 185 aa10.19□□□□□ -0.78
TPM4-202ENST00000344824 DEFB1P60022 68 aa10.19□□□□□ -0.78
TPM4-202ENST00000344824 PSG3Q16557 428 aa10.19□□□□□ -0.78
TPM4-202ENST00000344824 PSMG4Q5JS54 123 aa10.19□□□□□ -0.78
TPM4-202ENST00000344824 CCDC28AQ8IWP9 274 aa10.19□□□□□ -0.78
TPM4-202ENST00000344824 C5orf17Q8NAS9 161 aa10.19□□□□□ -0.78
TPM4-202ENST00000344824 NKX6-2Q9C056 277 aaPredicted RBP10.19□□□□□ -0.78
TPM4-202ENST00000344824 EPDR1Q9UM22 224 aa10.19□□□□□ -0.78
TPM4-202ENST00000344824 IGKV2-40A0A087WW87 121 aaPredicted RBP10.18□□□□□ -0.78
TPM4-202ENST00000344824 F6UZH7 168 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 PEX7O00628 323 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 PDE6DO43924 150 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 IGKV2D-40P01614 121 aaPredicted RBP10.18□□□□□ -0.78
TPM4-202ENST00000344824 APOC4P55056 127 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 DEFB131AP59861 70 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 SNRPD3P62318 126 aaKnown RBP10.18□□□□□ -0.78
TPM4-202ENST00000344824 ZNF674Q2M3X9 581 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 GOLT1AQ6ZVE7 132 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 CYB561D1Q8N8Q1 229 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms