RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 CSN1S1P47710 185 aa16.63■□□□□ 0.25
CCDC38-201ENST00000344280 TMEM190Q8WZ59 177 aa16.63■□□□□ 0.25
CCDC38-201ENST00000344280 CHCHD1Q96BP2 118 aaKnown RBP16.63■□□□□ 0.25
CCDC38-201ENST00000344280 VGLL1Q99990 258 aa16.63■□□□□ 0.25
CCDC38-201ENST00000344280 CT45A10P0DMU9 189 aa16.62■□□□□ 0.25
CCDC38-201ENST00000344280 PSG9Q00887 426 aa16.62■□□□□ 0.25
CCDC38-201ENST00000344280 ZNF502Q8TBZ5 544 aa16.62■□□□□ 0.25
CCDC38-201ENST00000344280 SH2D1AO60880 128 aa16.62■□□□□ 0.25
CCDC38-201ENST00000344280 CLEC3BP05452 202 aa16.62■□□□□ 0.25
CCDC38-201ENST00000344280 GNLYP22749 145 aa16.62■□□□□ 0.25
CCDC38-201ENST00000344280 RHOGP84095 191 aa16.62■□□□□ 0.25
CCDC38-201ENST00000344280 FAM110DQ8TAY7 271 aaPredicted RBP16.62■□□□□ 0.25
CCDC38-201ENST00000344280 UQCR10Q9UDW1 63 aa16.62■□□□□ 0.25
CCDC38-201ENST00000344280 PKD1L2Q7Z442 2459 aa16.62■□□□□ 0.25
CCDC38-201ENST00000344280 MAP1AP78559 2803 aaPredicted RBP16.61■□□□□ 0.25
CCDC38-201ENST00000344280 MUC21A0A0G2JKD1 596 aa16.61■□□□□ 0.25
CCDC38-201ENST00000344280 MUC21A0A140T8X8 626 aa16.61■□□□□ 0.25
CCDC38-201ENST00000344280 RIGQ13278 110 aa16.61■□□□□ 0.25
CCDC38-201ENST00000344280 MUC21Q5SSG8 566 aa16.61■□□□□ 0.25
CCDC38-201ENST00000344280 M0QZK8 103 aa16.61■□□□□ 0.25
CCDC38-201ENST00000344280 G0S2P27469 103 aa16.61■□□□□ 0.25
CCDC38-201ENST00000344280 MRPL52Q86TS9 123 aaKnown RBP16.61■□□□□ 0.25
CCDC38-201ENST00000344280 TMEM70Q9BUB7 260 aa16.61■□□□□ 0.25
CCDC38-201ENST00000344280 PRORYQ9H606 182 aa16.61■□□□□ 0.25
CCDC38-201ENST00000344280 ZNF80P51504 273 aaPredicted RBP16.6■□□□□ 0.25
CCDC38-201ENST00000344280 LYZL1Q6UWQ5 148 aa16.6■□□□□ 0.25
CCDC38-201ENST00000344280 Q6ZN92 141 aa16.6■□□□□ 0.25
CCDC38-201ENST00000344280 PRR25Q96S07 402 aa16.6■□□□□ 0.25
CCDC38-201ENST00000344280 TXN2Q99757 166 aa16.6■□□□□ 0.25
CCDC38-201ENST00000344280 IGHV3OR16-10A0A075B7F0 116 aa16.59■□□□□ 0.25
CCDC38-201ENST00000344280 IGHV3-66A0A0C4DH42 116 aa16.59■□□□□ 0.25
CCDC38-201ENST00000344280 TMEM213A2RRL7 107 aa16.59■□□□□ 0.25
CCDC38-201ENST00000344280 CCDC140Q96MF4 163 aa16.59■□□□□ 0.25
CCDC38-201ENST00000344280 ZFAND3Q9H8U3 227 aa16.59■□□□□ 0.25
CCDC38-201ENST00000344280 CENPVL3A0A0U1RRI6 287 aa16.59■□□□□ 0.25
CCDC38-201ENST00000344280 LEPROTL1O95214 131 aa16.59■□□□□ 0.25
CCDC38-201ENST00000344280 RPLP1P05386 114 aaKnown RBP16.59■□□□□ 0.25
CCDC38-201ENST00000344280 IGLL1P15814 213 aa16.59■□□□□ 0.25
CCDC38-201ENST00000344280 FAM162BQ5T6X4 162 aa16.59■□□□□ 0.25
CCDC38-201ENST00000344280 TRAV9-2A0A087WT02 112 aa16.58■□□□□ 0.25
CCDC38-201ENST00000344280 TMEM189A5PLL7 270 aa16.58■□□□□ 0.25
CCDC38-201ENST00000344280 NPFFO15130 113 aa16.58■□□□□ 0.25
CCDC38-201ENST00000344280 GATD1Q8NB37 220 aa16.58■□□□□ 0.25
CCDC38-201ENST00000344280 CFAP46Q8IYW2 2715 aa16.58■□□□□ 0.24
CCDC38-201ENST00000344280 IGHV3OR16-13A0A075B7E8 117 aa16.58■□□□□ 0.24
CCDC38-201ENST00000344280 IGHV3-74A0A0B4J1X5 117 aa16.58■□□□□ 0.24
CCDC38-201ENST00000344280 TMEM219Q86XT9 240 aa16.58■□□□□ 0.24
CCDC38-201ENST00000344280 MCRIP2Q9BUT9 160 aaKnown RBP16.58■□□□□ 0.24
CCDC38-201ENST00000344280 SERTM2A0A1B0GWG4 89 aa16.57■□□□□ 0.24
CCDC38-201ENST00000344280 SYS1-DBNDD2H3BUS1 97 aa16.57■□□□□ 0.24
CCDC38-201ENST00000344280 CRXO43186 299 aaPredicted RBP16.57■□□□□ 0.24
CCDC38-201ENST00000344280 CLEC19AQ6UXS0 136 aa16.57■□□□□ 0.24
CCDC38-201ENST00000344280 ZNF575Q86XF7 245 aa16.57■□□□□ 0.24
CCDC38-201ENST00000344280 CBY1Q9Y3M2 126 aa16.57■□□□□ 0.24
CCDC38-201ENST00000344280 PRAC2D3DTV9 90 aa16.57■□□□□ 0.24
CCDC38-201ENST00000344280 IGHV4-39P01824 125 aa16.57■□□□□ 0.24
CCDC38-201ENST00000344280 TFPI2P48307 235 aa16.57■□□□□ 0.24
CCDC38-201ENST00000344280 TP73-AS1Q9UF72 201 aa16.57■□□□□ 0.24
CCDC38-201ENST00000344280 TIMM8BQ9Y5J9 83 aaPredicted RBP16.57■□□□□ 0.24
CCDC38-201ENST00000344280 SPG11Q96JI7 2443 aa16.56■□□□□ 0.24
CCDC38-201ENST00000344280 CLPSL1A2RUU4 121 aa16.56■□□□□ 0.24
CCDC38-201ENST00000344280 BUB3O43684 328 aa16.56■□□□□ 0.24
CCDC38-201ENST00000344280 SCGB2A1O75556 95 aa16.56■□□□□ 0.24
CCDC38-201ENST00000344280 Q6AWC8 147 aa16.56■□□□□ 0.24
CCDC38-201ENST00000344280 RNF182Q8N6D2 247 aa16.56■□□□□ 0.24
CCDC38-201ENST00000344280 KLHDC1Q8N7A1 406 aa16.56■□□□□ 0.24
CCDC38-201ENST00000344280 HNRNPA3P51991 378 aaKnown RBP16.56■□□□□ 0.24
CCDC38-201ENST00000344280 ERCC8Q13216 396 aa16.56■□□□□ 0.24
CCDC38-201ENST00000344280 COX8CQ7Z4L0 72 aa16.56■□□□□ 0.24
CCDC38-201ENST00000344280 OR4C46A6NHA9 309 aa16.55■□□□□ 0.24
CCDC38-201ENST00000344280 ZNF25P17030 456 aaPredicted RBP16.55■□□□□ 0.24
CCDC38-201ENST00000344280 SAPCD1Q5SSQ6 148 aa16.55■□□□□ 0.24
CCDC38-201ENST00000344280 IGHV3-49A0A0A0MS15 119 aa16.54■□□□□ 0.24
CCDC38-201ENST00000344280 FAM106AQ4KMX7 169 aa16.54■□□□□ 0.24
CCDC38-201ENST00000344280 ZNF493Q6ZR52 646 aa16.54■□□□□ 0.24
CCDC38-201ENST00000344280 AMN1Q8IY45 258 aa16.54■□□□□ 0.24
CCDC38-201ENST00000344280 C5orf56Q8N8D9 126 aa16.54■□□□□ 0.24
CCDC38-201ENST00000344280 LINC00527Q9UJ94 153 aa16.54■□□□□ 0.24
CCDC38-201ENST00000344280 TSPOP30536 169 aa16.54■□□□□ 0.24
CCDC38-201ENST00000344280 KLK9Q2XQG4 91 aa16.54■□□□□ 0.24
CCDC38-201ENST00000344280 KLK9Q9UKQ9 250 aa16.54■□□□□ 0.24
CCDC38-201ENST00000344280 A0A1B0GW15 77 aa16.53■□□□□ 0.24
CCDC38-201ENST00000344280 H0Y8G0 127 aa16.53■□□□□ 0.24
CCDC38-201ENST00000344280 ZNF207O43670 478 aaKnown RBP16.53■□□□□ 0.24
CCDC38-201ENST00000344280 D6R8Y8 96 aa16.53■□□□□ 0.24
CCDC38-201ENST00000344280 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.52■□□□□ 0.24
CCDC38-201ENST00000344280 BRD3OSQ6XYD6 125 aa16.52■□□□□ 0.24
CCDC38-201ENST00000344280 STPG4Q8N801 248 aa16.52■□□□□ 0.24
CCDC38-201ENST00000344280 LAMTOR2Q9Y2Q5 125 aa16.52■□□□□ 0.24
CCDC38-201ENST00000344280 PIEZO1Q92508 2521 aa16.52■□□□□ 0.23
CCDC38-201ENST00000344280 hDV102S1A0JD36 115 aa16.52■□□□□ 0.23
CCDC38-201ENST00000344280 LOXL1Q08397 574 aaPredicted RBP16.52■□□□□ 0.23
CCDC38-201ENST00000344280 GAGE1Q13065 139 aa16.52■□□□□ 0.23
CCDC38-201ENST00000344280 ARL6IP6Q8N6S5 226 aa16.52■□□□□ 0.23
CCDC38-201ENST00000344280 AP5S1Q9NUS5 200 aa16.52■□□□□ 0.23
CCDC38-201ENST00000344280 CELSR2Q9HCU4 2923 aa16.51■□□□□ 0.23
CCDC38-201ENST00000344280 IFI27P40305 119 aaPredicted RBP16.51■□□□□ 0.23
CCDC38-201ENST00000344280 LOC389332A0A1B0GUA5 103 aa16.5■□□□□ 0.23
CCDC38-201ENST00000344280 FAM104BQ5XKR9 115 aa16.5■□□□□ 0.23
CCDC38-201ENST00000344280 PSMG3-AS1Q96PY0 264 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms