RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TEX38Q6PEX7 206 aa10.28□□□□□ -0.76
HERPUD1-202ENST00000344114 SIGLEC15Q6ZMC9 328 aa10.28□□□□□ -0.76
HERPUD1-202ENST00000344114 FAM24BQ8N5W8 94 aa10.28□□□□□ -0.76
HERPUD1-202ENST00000344114 OR4X2Q8NGF9 303 aa10.28□□□□□ -0.76
HERPUD1-202ENST00000344114 FMC1Q96HJ9 113 aa10.28□□□□□ -0.76
HERPUD1-202ENST00000344114 AAMDCQ9H7C9 122 aa10.28□□□□□ -0.76
HERPUD1-202ENST00000344114 KLF12Q9Y4X4 402 aa10.28□□□□□ -0.76
HERPUD1-202ENST00000344114 H3BTX0 84 aa10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 K7EN84 100 aa10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 BUB3O43684 328 aa10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 GGCTO75223 188 aaKnown RBP10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 TCRAP04437 139 aa10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 GALR1P47211 349 aa10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 MEOX2P50222 304 aa10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 ARL6IP6Q8N6S5 226 aa10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 TSSC4Q9Y5U2 329 aaPredicted RBP10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 U3KQE9 123 aa10.27□□□□□ -0.76
HERPUD1-202ENST00000344114 GCGP01275 180 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 IGLV2-8P01709 118 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 TRBV12-3P01733 135 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 IGHV3-11P01762 117 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 RAB5AP20339 215 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 OR10G8Q8NGN5 311 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 MYOZ3Q8TDC0 251 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 IMMP2LQ96T52 175 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 PEF1Q9UBV8 284 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 RPH3ALQ9UNE2 315 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 URGCP-MRPS24S4R325 110 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 TRBV24-1A0A075B6N3 115 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 IGHV3OR16-8A0A075B7F1 116 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 TRBV6-1A0A0K0K1D8 114 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 SERTM2A0A1B0GWG4 89 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 K7EQM0 130 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 SLC17A3O00476 420 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 KCNIP4Q6PIL6 250 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 EXOC3-AS1Q8N2X6 119 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 RNF152Q8N8N0 203 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 BTF3L4Q96K17 158 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 C17orf77Q96MU5 243 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 SLC50A1Q9BRV3 221 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 GPR61Q9BZJ8 451 aa10.26□□□□□ -0.77
HERPUD1-202ENST00000344114 ISLRO14498 428 aa10.25□□□□□ -0.77
HERPUD1-202ENST00000344114 PFN1P07737 140 aaKnown RBP10.25□□□□□ -0.77
HERPUD1-202ENST00000344114 NHLRC4P0CG21 123 aaPredicted RBP10.25□□□□□ -0.77
HERPUD1-202ENST00000344114 LCNL1Q6ZST4 164 aa10.25□□□□□ -0.77
HERPUD1-202ENST00000344114 Q86TA4 180 aa10.25□□□□□ -0.77
HERPUD1-202ENST00000344114 BAGE2Q86Y30 109 aa10.25□□□□□ -0.77
HERPUD1-202ENST00000344114 TMEM75Q8N9X5 138 aa10.25□□□□□ -0.77
HERPUD1-202ENST00000344114 BIN3Q9NQY0 253 aa10.25□□□□□ -0.77
HERPUD1-202ENST00000344114 OSTCQ9NRP0 149 aa10.25□□□□□ -0.77
HERPUD1-202ENST00000344114 TRAV34A0A0B4J273 112 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 A0A1W2PS18 150 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 C1orf196B1AJZ1 125 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 C3orf84H3BNL1 204 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 CXCL1P09341 107 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 LGALS1P09382 135 aaKnown RBP10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 MGST1P10620 155 aaKnown RBP10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 CSN1S1P47710 185 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 C16orf54Q6UWD8 224 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 DPF1Q92782 380 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 GRAMD2BQ96HH9 432 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 LINC00479Q96M42 142 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 PYGO2Q9BRQ0 406 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 MLXQ9UH92 298 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 SMAD5-AS1Q9Y6J3 95 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 U3KQK5 164 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 RYR2Q92736 4967 aa10.24□□□□□ -0.77
HERPUD1-202ENST00000344114 TRAV9-1A0A075B6T8 112 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 TGIF2-C20orf24A0A0A6YYL0 155 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 FBLL1A6NHQ2 334 aaKnown RBP10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 ZNF785A8K8V0 405 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 DIRC3C9JPN6 131 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 ZNF207O43670 478 aaKnown RBP10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 LTAP01374 205 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 RPLP1P05386 114 aaKnown RBP10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 ERVFC1-1P60608 527 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 RAB5BP61020 215 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 FLI1Q01543 452 aaPredicted RBP10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 FAM106AQ4KMX7 169 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 IBA57Q5T440 356 aaKnown RBP10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 C10orf99Q6UWK7 81 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 GOLT1AQ6ZVE7 132 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 FAM231DQ6ZW35 169 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 GLMPQ8WWB7 406 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 FAM210BQ96KR6 192 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 UBE2E2Q96LR5 201 aa10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 ZNF331Q9NQX6 463 aaPredicted RBP10.23□□□□□ -0.77
HERPUD1-202ENST00000344114 K7EMT4 169 aa10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 OR5I1Q13606 314 aa10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 UNQ9165/PRO28630Q6UXU0 137 aa10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 GPHB5Q86YW7 130 aa10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 MLST8Q9BVC4 326 aa10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 DAZ1Q9NQZ3 744 aaKnown RBP10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 CLEC5AQ9NY25 188 aa10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 IL36BQ9NZH7 164 aa10.22□□□□□ -0.77
HERPUD1-202ENST00000344114 V9GYV3 84 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms