RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PAX9P55771 341 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 ZNF747Q9BV97 191 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 BAALC-AS2P0C853 105 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 FAM27BQ5VT28 67 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 PATJQ8NI35 1801 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 RPL18AQ02543 176 aaKnown RBP3.05□□□□□ -1.92
SYNE2-202ENST00000344113 PRSS38A1L453 326 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 C15orf61A6NNL5 157 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 SPRY1O43609 319 aaPredicted RBP3.05□□□□□ -1.92
SYNE2-202ENST00000344113 CFHR2P36980 270 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 UBE2D3P61077 147 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 UBE2D2P62837 147 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 SLC25A45Q8N413 288 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 TMEM202A6NGA9 273 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 FXYD5Q96DB9 178 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 LTBP4Q8N2S1 1624 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 CMC4P56277 68 aaPredicted RBP3.05□□□□□ -1.92
SYNE2-202ENST00000344113 Q9H3A6 140 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 DAZ1Q9NQZ3 744 aaKnown RBP3.05□□□□□ -1.92
SYNE2-202ENST00000344113 PAX8Q06710 450 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 CR1LQ2VPA4 569 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 LOC107984640A0A0U1RRK4 108 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 DEFB121Q5J5C9 76 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 LSM4Q9Y4Z0 139 aaKnown RBP3.05□□□□□ -1.92
SYNE2-202ENST00000344113 M0R1B8 84 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 NXPH4O95158 308 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 PLCH1Q4KWH8 1693 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 IGHV1-69DA0A0B4J2H0 117 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 CTGFP29279 349 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 C3orf56Q8N813 242 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 SLX4Q8IY92 1834 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 C5orf38Q86SI9 138 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 A0A1B0GUS0 222 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 ZGLP1P0C6A0 271 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 CD70P32970 193 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 LINC00158P58513 81 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 SPACA5Q96QH8 159 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 V9GYV3 84 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 ARAP2Q8WZ64 1704 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 ZFP2Q6ZN57 461 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 RFPL3SP0C7P2 107 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 CD27P26842 260 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 SLC25A29Q8N8R3 303 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 J3QQQ9 107 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 NAV2Q8IVL1 2488 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 ANKRD31Q8N7Z5 1873 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 C11orf1Q9H5F2 150 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 EMC6Q9BV81 110 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 CCL28Q9NRJ3 127 aa3.05□□□□□ -1.92
SYNE2-202ENST00000344113 PPIFP30405 207 aaKnown RBP3.04□□□□□ -1.92
SYNE2-202ENST00000344113 HAMPP81172 84 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 LY6G5CQ5SRR4 150 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 FAM222AQ5U5X8 452 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 CRIPAKQ8N1N5 446 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 INS-IGF2F8WCM5 200 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 ROBO1Q9Y6N7 1651 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 NDUFA11Q86Y39 141 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 BCORQ6W2J9 1755 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 NEU4Q8WWR8 484 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-202ENST00000344113 TRAV26-2A0A0B4J265 109 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 C11orf53Q8IXP5 236 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 DPH3P1Q9H4G8 78 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 TRIAP1O43715 76 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 TMEM75Q8N9X5 138 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 RFNGQ9Y644 331 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 A0A087X002 238 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 ELSPBP1Q96BH3 223 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 TRGV5A0A0B4J1U4 118 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 RNF152Q8N8N0 203 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 ICOSQ9Y6W8 199 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 K7ESM1 405 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 LIME1Q9H400 295 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 RGPD2P0DJD1 1756 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 GATA1P15976 413 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-202ENST00000344113 NTN5Q8WTR8 489 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-202ENST00000344113 RNF208Q9H0X6 261 aa3.04□□□□□ -1.92
SYNE2-202ENST00000344113 TRAV7A0A075B6U4 112 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 TEX22C9J3V5 150 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 TRBV12-3P01733 135 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 CNEP1R1Q8N9A8 125 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 A0A1W2PQU0 124 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 PAX4O43316 350 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 OPRPNQ99935 248 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-202ENST00000344113 DOCK1Q14185 1865 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 AHDC1Q5TGY3 1603 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-202ENST00000344113 TRBV7-6A0A0J9YX20 115 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 CFHR1Q03591 330 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 CFHR4Q92496 578 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 UPK3BQ9BT76 320 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 DKK2Q9UBU2 259 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 RPL27AP46776 148 aaKnown RBP3.03□□□□□ -1.92
SYNE2-202ENST00000344113 DOCK5Q9H7D0 1870 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 TRBV30A0A0K0K1B3 111 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 WFDC9Q8NEX5 89 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 PHLPP1O60346 1717 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 LINC00473A8K010 186 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 A0A1B0GW54 56 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 SMIM2Q9BVW6 85 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 CCL16O15467 120 aa3.03□□□□□ -1.92
SYNE2-202ENST00000344113 PIGYQ3MUY2 71 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms