RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 SAV1Q9H4B6 383 aaPredicted RBP13.84□□□□□ -0.19
CDHR4-201ENST00000343366 KIR2DL5BA0A0G2JN68 375 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 KIR2DL5BA0A0G2JPC4 375 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 H2AFB1P0C5Y9 115 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 HLA-DRB4P13762 266 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 PPT1P50897 306 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 APOC4P55056 127 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 ZNF726P1Q15940 193 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 KIR2DL5AQ8N109 375 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 KIR2DL5BQ8NHK3 375 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 RXFP4Q8TDU9 374 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 HLA-DRB4X5D2U9 266 aa13.83□□□□□ -0.2
CDHR4-201ENST00000343366 SLC17A3O00476 420 aa13.82□□□□□ -0.2
CDHR4-201ENST00000343366 UBE2CO00762 179 aa13.82□□□□□ -0.2
CDHR4-201ENST00000343366 HMGB3O15347 200 aaKnown RBP13.82□□□□□ -0.2
CDHR4-201ENST00000343366 NDUFB4O95168 129 aa13.82□□□□□ -0.2
CDHR4-201ENST00000343366 HBE1P02100 147 aa13.82□□□□□ -0.2
CDHR4-201ENST00000343366 CSN1S1P47710 185 aa13.82□□□□□ -0.2
CDHR4-201ENST00000343366 MORN3Q6PF18 240 aaPredicted RBP13.82□□□□□ -0.2
CDHR4-201ENST00000343366 WFDC10AQ9H1F0 79 aa13.82□□□□□ -0.2
CDHR4-201ENST00000343366 ARL2-SNX15V9GYD0 113 aa13.82□□□□□ -0.2
CDHR4-201ENST00000343366 FRMD6-AS1P0C7T7 363 aa13.81□□□□□ -0.2
CDHR4-201ENST00000343366 ACTL10Q5JWF8 245 aa13.81□□□□□ -0.2
CDHR4-201ENST00000343366 LINC00322Q6ZN03 302 aaPredicted RBP13.81□□□□□ -0.2
CDHR4-201ENST00000343366 RNF182Q8N6D2 247 aa13.81□□□□□ -0.2
CDHR4-201ENST00000343366 SFT2D1Q8WV19 159 aa13.81□□□□□ -0.2
CDHR4-201ENST00000343366 RPUSD4Q96CM3 377 aaKnown RBP13.81□□□□□ -0.2
CDHR4-201ENST00000343366 CITED4Q96RK1 184 aa13.81□□□□□ -0.2
CDHR4-201ENST00000343366 OTORQ9NRC9 128 aa13.81□□□□□ -0.2
CDHR4-201ENST00000343366 TRAV1-1A0A0B4J248 108 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 A0A0J9YX75 114 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 A0A1W2PRE2 83 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 H3BMM0 161 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 H3BTX0 84 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 BOLA2-SMG1P6H3BVE0 249 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 SNRPCP09234 159 aaKnown RBP13.8□□□□□ -0.2
CDHR4-201ENST00000343366 RANP62826 216 aaKnown RBP13.8□□□□□ -0.2
CDHR4-201ENST00000343366 BLOC1S1P78537 153 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 OR10J6PQ8NGY7 276 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 C20orf173Q96LM9 149 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 Q9H3A6 140 aa13.8□□□□□ -0.2
CDHR4-201ENST00000343366 PLECQ15149 4684 aaKnown RBP13.8□□□□□ -0.2
CDHR4-201ENST00000343366 FHITP49789 147 aa13.79□□□□□ -0.2
CDHR4-201ENST00000343366 ICAM4Q14773 271 aa13.79□□□□□ -0.2
CDHR4-201ENST00000343366 SSX7Q7RTT5 188 aa13.79□□□□□ -0.2
CDHR4-201ENST00000343366 TRPT1Q86TN4 253 aaKnown RBP13.79□□□□□ -0.2
CDHR4-201ENST00000343366 IQCF2Q8IXL9 164 aa13.79□□□□□ -0.2
CDHR4-201ENST00000343366 OR8A1Q8NGG7 326 aa13.79□□□□□ -0.2
CDHR4-201ENST00000343366 CMTM2Q8TAZ6 248 aa13.79□□□□□ -0.2
CDHR4-201ENST00000343366 C1QTNF4Q9BXJ3 329 aa13.79□□□□□ -0.2
CDHR4-201ENST00000343366 PLA2G2EQ9NZK7 142 aa13.79□□□□□ -0.2
CDHR4-201ENST00000343366 BOLA1Q9Y3E2 137 aa13.79□□□□□ -0.2
CDHR4-201ENST00000343366 SERTM2A0A1B0GWG4 89 aa13.78□□□□□ -0.2
CDHR4-201ENST00000343366 RBMY1BA6NDE4 496 aaKnown RBP13.78□□□□□ -0.2
CDHR4-201ENST00000343366 RBMY1EA6NEQ0 496 aaKnown RBP13.78□□□□□ -0.2
CDHR4-201ENST00000343366 RBMY1DP0C7P1 496 aaKnown RBP13.78□□□□□ -0.2
CDHR4-201ENST00000343366 IGFL4Q6B9Z1 124 aa13.78□□□□□ -0.2
CDHR4-201ENST00000343366 ASCL2Q99929 193 aa13.78□□□□□ -0.2
CDHR4-201ENST00000343366 CSTL1Q9H114 145 aa13.78□□□□□ -0.2
CDHR4-201ENST00000343366 RBAKDNA6NC62 111 aa13.77□□□□□ -0.21
CDHR4-201ENST00000343366 PGPA6NDG6 321 aa13.77□□□□□ -0.21
CDHR4-201ENST00000343366 KNCNA6PVL3 124 aa13.77□□□□□ -0.21
CDHR4-201ENST00000343366 A8MTW9 85 aa13.77□□□□□ -0.21
CDHR4-201ENST00000343366 ZNF705EA8MWA4 302 aaPredicted RBP13.77□□□□□ -0.21
CDHR4-201ENST00000343366 IFNA7P01567 189 aa13.77□□□□□ -0.21
CDHR4-201ENST00000343366 SLC25A5P05141 298 aaKnown RBP13.77□□□□□ -0.21
CDHR4-201ENST00000343366 ZNF124Q15973 351 aa13.77□□□□□ -0.21
CDHR4-201ENST00000343366 ALKAL2Q6UX46 152 aa13.77□□□□□ -0.21
CDHR4-201ENST00000343366 EXOC3-AS1Q8N2X6 119 aa13.77□□□□□ -0.21
CDHR4-201ENST00000343366 TCEAL7Q9BRU2 100 aa13.77□□□□□ -0.21
CDHR4-201ENST00000343366 AMBPP02760 352 aa13.76□□□□□ -0.21
CDHR4-201ENST00000343366 FGF8P55075 233 aaPredicted RBP13.76□□□□□ -0.21
CDHR4-201ENST00000343366 C5orf17Q8NAS9 161 aa13.76□□□□□ -0.21
CDHR4-201ENST00000343366 OR4B1Q8NGF8 309 aa13.76□□□□□ -0.21
CDHR4-201ENST00000343366 K7EQM0 130 aa13.75□□□□□ -0.21
CDHR4-201ENST00000343366 EIF3GO75821 320 aaKnown RBP eCLIP13.75□□□□□ -0.21
CDHR4-201ENST00000343366 RPL35AP18077 110 aaKnown RBP13.75□□□□□ -0.21
CDHR4-201ENST00000343366 HLA-DMBP28068 263 aa13.75□□□□□ -0.21
CDHR4-201ENST00000343366 TAGLN2P37802 199 aaKnown RBP13.75□□□□□ -0.21
CDHR4-201ENST00000343366 HIST1H1AQ02539 215 aaPredicted RBP13.75□□□□□ -0.21
CDHR4-201ENST00000343366 PMS2P11Q13670 270 aa13.75□□□□□ -0.21
CDHR4-201ENST00000343366 TEX261Q6UWH6 196 aa13.75□□□□□ -0.21
CDHR4-201ENST00000343366 Q6ZWC4 215 aa13.75□□□□□ -0.21
CDHR4-201ENST00000343366 LINC00477Q96M19 166 aa13.75□□□□□ -0.21
CDHR4-201ENST00000343366 TXNDC17Q9BRA2 123 aa13.75□□□□□ -0.21
CDHR4-201ENST00000343366 MANBALQ9NQG1 85 aa13.75□□□□□ -0.21
CDHR4-201ENST00000343366 PPP1R14DQ9NXH3 145 aa13.75□□□□□ -0.21
CDHR4-201ENST00000343366 FBLL1A6NHQ2 334 aaKnown RBP13.74□□□□□ -0.21
CDHR4-201ENST00000343366 ZNF705FA8MVS1 300 aaPredicted RBP13.74□□□□□ -0.21
CDHR4-201ENST00000343366 CNN1P51911 297 aaKnown RBP13.74□□□□□ -0.21
CDHR4-201ENST00000343366 HAGHQ16775 308 aa13.74□□□□□ -0.21
CDHR4-201ENST00000343366 GDF5OSQ5U4N7 250 aa13.74□□□□□ -0.21
CDHR4-201ENST00000343366 RCHY1Q96PM5 261 aa13.74□□□□□ -0.21
CDHR4-201ENST00000343366 ODF3Q96PU9 254 aa13.74□□□□□ -0.21
CDHR4-201ENST00000343366 ZMAT4Q9H898 229 aa13.74□□□□□ -0.21
CDHR4-201ENST00000343366 TP53TG1Q9Y2A0 90 aa13.74□□□□□ -0.21
CDHR4-201ENST00000343366 NPIPB6E9PJ23 425 aa13.73□□□□□ -0.21
CDHR4-201ENST00000343366 F6UB75 175 aa13.73□□□□□ -0.21
CDHR4-201ENST00000343366 F6UZH7 168 aa13.73□□□□□ -0.21
CDHR4-201ENST00000343366 M0R3E3 92 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms