RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 C17orf77Q96MU5 243 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 LENEPQ9Y5L5 61 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 MTORP42345 2549 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 LGALS7P47929 136 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 LYZP61626 148 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 LINC00305Q7Z4B0 112 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 A0A1W2PPI3 338 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 CGAP01215 116 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 FOXI2Q6ZQN5 318 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 RITA1Q96K30 269 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 TEX15Q9BXT5 2789 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 PRR33A8MZF0 331 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 C8orf88P0DMB2 117 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 CTGFP29279 349 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 IGHV3-53P01767 116 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 PYYP10082 97 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 DNAJC30Q96LL9 226 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 ATOX1O00244 68 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 TAX1BP3O14907 124 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 ERHP84090 104 aaKnown RBP2.91□□□□□ -1.94
SYNE1-201ENST00000341594 PSG9Q00887 426 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 MIR17HGQ75NE6 70 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 TM4SF5O14894 197 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 FGF12P61328 243 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 GFI1Q99684 422 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 DSPP15924 2871 aaKnown RBP2.91□□□□□ -1.94
SYNE1-201ENST00000341594 BAHCC1Q9P281 2608 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 FAM90A27PA6NNH2 459 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 PSG7Q13046 419 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 NDUFC2-KCTD14E9PQ53 114 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 PLNP26678 52 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 SLC38A11Q08AI6 406 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 MAPK1IP1LQ8NDC0 245 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 IGHV1-45A0A0A0MS14 117 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 IGHV3-16A0A0C4DH30 117 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 F6UB75 175 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 CTLA4P16410 223 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 FAM90A2PQ658T7 463 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 KIR2DL4Q99706 377 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 SLC25A39Q9BZJ4 359 aaPredicted RBP2.91□□□□□ -1.94
SYNE1-201ENST00000341594 C11orf1Q9H5F2 150 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 PPYP01298 95 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 TNXAQ16473 311 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 OCC1Q8TAD7 63 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 C17orf98A8MV24 154 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 RNF5Q99942 180 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 HYPMO75409 117 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 A0A1W2PRX2 142 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 C5orf67F2Z3F1 127 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 SPINT2O43291 252 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 RPL31P62899 125 aaKnown RBP2.91□□□□□ -1.94
SYNE1-201ENST00000341594 TMEM14EPQ6UXP3 125 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 SIGLEC9Q9Y336 463 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 NPIPB6E9PJ23 425 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 IGLC1P0CG04 106 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 LEPP41159 167 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 C2orf82Q6UX34 121 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 C4orf51C9J302 202 aa2.91□□□□□ -1.94
SYNE1-201ENST00000341594 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.91□□□□□ -1.94
SYNE1-201ENST00000341594 MRPS21P82921 87 aaKnown RBP2.91□□□□□ -1.94
SYNE1-201ENST00000341594 IGKV3D-7A0A0C4DH55 119 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 RASL11BQ9BPW5 248 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 ZNF815PA8K554 130 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 CRLF1O75462 422 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 A0A1B0GX51 115 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 UNC119Q13432 240 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 ZNF492Q9P255 531 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 TSKUQ8WUA8 353 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 GTSF1Q8WW33 167 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 VSIG8P0DPA2 414 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 UBE2E1P51965 193 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 SMIM9A6NGZ8 99 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 UPK2O00526 184 aa2.9□□□□□ -1.94
SYNE1-201ENST00000341594 UTF1Q5T230 341 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 DKK4Q9UBT3 224 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 COL4A3Q01955 1670 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 DEFB105AQ8NG35 78 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 GGTLC3B5MD39 225 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 IGLV3-1P01715 115 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 COX8AP10176 69 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 EGR4Q05215 589 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 SIGLEC15Q6ZMC9 328 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 SRSF12Q8WXF0 261 aaKnown RBP2.9□□□□□ -1.95
SYNE1-201ENST00000341594 RASL10BQ96S79 203 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 TINCRA0A1B0GVN0 87 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 FOXI3A8MTJ6 420 aaPredicted RBP2.9□□□□□ -1.95
SYNE1-201ENST00000341594 KLRD1Q13241 179 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 RPL39P5Q59GN2 51 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 BUB3O43684 328 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 ADMP35318 185 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 PCOLCEQ15113 449 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 LINC00574Q9H8X3 128 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 A0A0J9YY10 115 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 ADCYAP1P18509 176 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 ATP5J2P56134 94 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 SPTSSBQ8NFR3 76 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 PRNDQ9UKY0 176 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 ITPR1Q14643 2758 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 IGLV1-36A0A0B4J1U3 117 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 CD69Q07108 199 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms