RNA–Protein interactions for RNA: ENST00000340811.8

PKP2-202, Transcript of plakophilin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-202ENST00000340811 HIST1H2BKO60814 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 IGKV2D-40P01614 121 aaPredicted RBP9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST1H2BJP06899 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST1H2BOP23527 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST1H2BBP33778 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 RIPPLY3P57055 190 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST1H2BDP58876 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST1H2BCP62807 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST2H2BEQ16778 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST1H2BHQ93079 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST1H2BNQ99877 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIST1H2BMQ99879 126 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 SOX21Q9Y651 276 aaPredicted RBP9.78□□□□□ -0.84
PKP2-202ENST00000340811 GGTLC3B5MD39 225 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 TMEM183BQ1AE95 376 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 TMEM183AQ8IXX5 376 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 FMC1Q96HJ9 113 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 HIGD1CA8MV81 97 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 FOXL1Q12952 345 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 VN1R17PQ8TDU5 208 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 MAP1LC3AQ9H492 121 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 FBLL1A6NHQ2 334 aaKnown RBP9.78□□□□□ -0.84
PKP2-202ENST00000340811 NUDT3O95989 172 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 P0C879 139 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 LEPP41159 167 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 FER1L6-AS1Q8NA97 138 aa9.78□□□□□ -0.84
PKP2-202ENST00000340811 A0A087WWC5 75 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 A0A1B0GUT8 65 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 Q1RN00 199 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 SCGB1D4Q6XE38 83 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 REC114Q7Z4M0 266 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 DYNAPQ8N1N2 210 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 TBX15Q96SF7 602 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 ST6GALNAC6Q969X2 333 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 C17orf77Q96MU5 243 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 IL36BQ9NZH7 164 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 CFAP46Q8IYW2 2715 aa9.77□□□□□ -0.85
PKP2-202ENST00000340811 A0A1B0GW64 132 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 PLA2G2AP14555 144 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 HERVK_113P61574 105 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 EIF4EBP1Q13541 118 aaPredicted RBP9.76□□□□□ -0.85
PKP2-202ENST00000340811 LYPD6BQ8NI32 183 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 HSPB9Q9BQS6 159 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 TMEM191AQ9H0A3 160 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 NRN1Q9NPD7 142 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 TOMM40O96008 361 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 IGLV2-23P01705 113 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 PRR20EP86478 221 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 PRR20CP86479 221 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 PRR20DP86480 221 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 PRR20BP86481 221 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 PRR20AP86496 221 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 ZNF502Q8TBZ5 544 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 LSM4Q9Y4Z0 139 aaKnown RBP9.76□□□□□ -0.85
PKP2-202ENST00000340811 F8P00451 2351 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 VAMP8Q9BV40 100 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 C1QTNF4Q9BXJ3 329 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 ZFP30Q9Y2G7 519 aa9.76□□□□□ -0.85
PKP2-202ENST00000340811 A0A1B0GUS0 222 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 LMO4P61968 165 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 PARD6GQ9BYG4 376 aaPredicted RBP9.75□□□□□ -0.85
PKP2-202ENST00000340811 TRAV12-3A0A0B4J271 114 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 DEFB136Q30KP8 78 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 TMEM136Q6ZRR5 245 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 FAM19A2Q8N3H0 131 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 FLNCQ14315 2725 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 IGLC1P0CG04 106 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 LOXL1Q08397 574 aaPredicted RBP9.75□□□□□ -0.85
PKP2-202ENST00000340811 ZNF256Q9Y2P7 627 aaPredicted RBP9.75□□□□□ -0.85
PKP2-202ENST00000340811 NUDT10Q8NFP7 164 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 NUDT11Q96G61 164 aa9.75□□□□□ -0.85
PKP2-202ENST00000340811 RPP21Q9H633 154 aaKnown RBP9.75□□□□□ -0.85
PKP2-202ENST00000340811 HBBP68871 147 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 LCN12Q6JVE5 192 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 SLC25A2Q9BXI2 301 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 XCL2Q9UBD3 114 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 PAM16Q9Y3D7 125 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 KALRNO60229 2985 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 SNCGO76070 127 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 BCL6BQ8N143 479 aaPredicted RBP9.74□□□□□ -0.85
PKP2-202ENST00000340811 HSPB8Q9UJY1 196 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 LINC01548A6NM66 108 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 RPLP1P05386 114 aaKnown RBP9.74□□□□□ -0.85
PKP2-202ENST00000340811 CDX1P47902 265 aaPredicted RBP9.74□□□□□ -0.85
PKP2-202ENST00000340811 ZNF138P52744 262 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 RNF182Q8N6D2 247 aa9.74□□□□□ -0.85
PKP2-202ENST00000340811 ZNF324O75467 553 aaPredicted RBP9.73□□□□□ -0.85
PKP2-202ENST00000340811 TCRAP04437 139 aa9.73□□□□□ -0.85
PKP2-202ENST00000340811 ATOH7Q8N100 152 aa9.73□□□□□ -0.85
PKP2-202ENST00000340811 C8orf86Q6ZUL3 223 aa9.73□□□□□ -0.85
PKP2-202ENST00000340811 ADMP35318 185 aa9.73□□□□□ -0.85
PKP2-202ENST00000340811 IQCJQ1A5X6 159 aa9.73□□□□□ -0.85
PKP2-202ENST00000340811 PATE2Q6UY27 113 aa9.73□□□□□ -0.85
PKP2-202ENST00000340811 LINC00518Q8N0U6 118 aa9.73□□□□□ -0.85
PKP2-202ENST00000340811 TSSC4Q9Y5U2 329 aaPredicted RBP9.73□□□□□ -0.85
PKP2-202ENST00000340811 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
PKP2-202ENST00000340811 CCL24O00175 119 aa9.73□□□□□ -0.85
PKP2-202ENST00000340811 YPEL3P61236 119 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms