RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 LINC00173Q6ZV60 143 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 PIMREGQ9BSJ6 248 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 LY6HO94772 140 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 IGLV1-44P01699 117 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 VCX2Q9H322 139 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 PGPEP1Q9NXJ5 209 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 H7C1H1 209 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 PAX8Q06710 450 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 ANAPC13Q9BS18 74 aa11.88□□□□□ -0.51
RRP1B-201ENST00000340648 PCNX1Q96RV3 2341 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 UBE2L6O14933 153 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 TMEM155Q4W5P6 130 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 IGKV3OR2-268A0A0C4DH90 116 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 PRSS46E5RG02 174 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 PDE6HQ13956 83 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 RNASE8Q8TDE3 154 aaKnown RBP11.87□□□□□ -0.51
RRP1B-201ENST00000340648 UCNP55089 124 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 VMO1Q7Z5L0 202 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 C14orf178Q8N769 122 aaPredicted RBP11.87□□□□□ -0.51
RRP1B-201ENST00000340648 THAP8Q8NA92 274 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 COL8A2P25067 703 aa11.87□□□□□ -0.51
RRP1B-201ENST00000340648 K7EP34 96 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 SPRNQ5BIV9 151 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 FREM1Q5H8C1 2179 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 RAX2Q96IS3 184 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 LTAP01374 205 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 RNF182Q8N6D2 247 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 Q8TCH9 128 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 THBDP07204 575 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 LGALS9BQ3B8N2 356 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 LGALS9CQ6DKI2 356 aa11.86□□□□□ -0.51
RRP1B-201ENST00000340648 ATP5J2P56134 94 aa11.85□□□□□ -0.51
RRP1B-201ENST00000340648 CKS1BP61024 79 aa11.85□□□□□ -0.51
RRP1B-201ENST00000340648 NPYP01303 97 aa11.85□□□□□ -0.51
RRP1B-201ENST00000340648 IGKV3D-20A0A0C4DH25 116 aa11.85□□□□□ -0.51
RRP1B-201ENST00000340648 TMEM219Q86XT9 240 aa11.85□□□□□ -0.51
RRP1B-201ENST00000340648 DLX4Q92988 240 aaPredicted RBP11.85□□□□□ -0.51
RRP1B-201ENST00000340648 LOXP28300 417 aaPredicted RBP11.85□□□□□ -0.51
RRP1B-201ENST00000340648 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
RRP1B-201ENST00000340648 IGF2BP2-AS1Q96M15 143 aa11.85□□□□□ -0.51
RRP1B-201ENST00000340648 C17orf77Q96MU5 243 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 IGHV2-70DA0A0C4DH43 119 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 ZNF747Q9BV97 191 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 OVOL1O14753 267 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 IGLC1P0CG04 106 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 PRTN3P24158 256 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 CDKN1BP46527 198 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 DEFB125Q8N687 156 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 KLRB1Q12918 225 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 DPH3P1Q9H4G8 78 aa11.84□□□□□ -0.51
RRP1B-201ENST00000340648 C2orf16Q68DN1 1984 aa11.83□□□□□ -0.51
RRP1B-201ENST00000340648 K7ERJ3 54 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 TMEM14CQ9P0S9 112 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 CSTL1Q9H114 145 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 DKK2Q9UBU2 259 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 A0A1W2PPM0 123 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 E7EQL1 145 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 ETDBQ3ZM63 59 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 FAM120AOSQ5T036 256 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 DUX3Q96PT4 197 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 PRR25Q96S07 402 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 ERG28Q9UKR5 140 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 COPS9Q8WXC6 57 aa11.83□□□□□ -0.52
RRP1B-201ENST00000340648 TSSC4Q9Y5U2 329 aaPredicted RBP11.83□□□□□ -0.52
RRP1B-201ENST00000340648 IGLV3-9A0A075B6K5 115 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 TMEM262E9PQX1 116 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 H3BRN7 92 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 NDUFB8O95169 186 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 TEX36Q5VZQ5 186 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 IL17RELQ6ZVW7 336 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 KMT2EQ8IZD2 1858 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 SCGB1A1P11684 91 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 TRAV41A0A0B4J266 112 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 IGKV1OR2-108A0A075B7D4 117 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 TRAV26-2A0A0B4J265 109 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 PATE2Q6UY27 113 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 SRSF8Q9BRL6 282 aaKnown RBP11.82□□□□□ -0.52
RRP1B-201ENST00000340648 NPFFR1Q9GZQ6 430 aa11.82□□□□□ -0.52
RRP1B-201ENST00000340648 TRAV12-3A0A0B4J271 114 aa11.81□□□□□ -0.52
RRP1B-201ENST00000340648 DNAL4O96015 105 aa11.81□□□□□ -0.52
RRP1B-201ENST00000340648 Q6ZS92 163 aa11.81□□□□□ -0.52
RRP1B-201ENST00000340648 PCDH15Q96QU1 1955 aa11.81□□□□□ -0.52
RRP1B-201ENST00000340648 CD28P10747 220 aa11.81□□□□□ -0.52
RRP1B-201ENST00000340648 NDUFS8O00217 210 aa11.81□□□□□ -0.52
RRP1B-201ENST00000340648 RNASE1P07998 156 aaKnown RBP11.81□□□□□ -0.52
RRP1B-201ENST00000340648 TMEM95Q3KNT9 176 aa11.81□□□□□ -0.52
RRP1B-201ENST00000340648 LINC00311Q8N616 119 aa11.81□□□□□ -0.52
RRP1B-201ENST00000340648 C9orf139Q6ZV77 190 aa11.8□□□□□ -0.52
RRP1B-201ENST00000340648 C7orf69Q9H7B7 122 aa11.8□□□□□ -0.52
RRP1B-201ENST00000340648 RRN3P1Q2M238 152 aa11.8□□□□□ -0.52
RRP1B-201ENST00000340648 Q8N8P6 123 aa11.8□□□□□ -0.52
RRP1B-201ENST00000340648 FAM167A-AS1Q96KT0 104 aa11.8□□□□□ -0.52
RRP1B-201ENST00000340648 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
RRP1B-201ENST00000340648 MRPL35Q9NZE8 188 aaKnown RBP11.8□□□□□ -0.52
RRP1B-201ENST00000340648 NDUFS7O75251 213 aa11.8□□□□□ -0.52
RRP1B-201ENST00000340648 NPC2P61916 151 aa11.8□□□□□ -0.52
RRP1B-201ENST00000340648 SPTAN1Q13813 2472 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms