RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PIEZO2Q9H5I5 2752 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 IGLV1-47P01700 117 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 FOXI2Q6ZQN5 318 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 TCF23Q7RTU1 214 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 MS4A6AQ9H2W1 248 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 NUP210LQ5VU65 1888 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 LRP4O75096 1905 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 ORMDL3Q8N138 153 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.07□□□□□ -0.8
LIN54-201ENST00000340417 IL36BQ9NZH7 164 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 SH2D1AO60880 128 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 CCDC168Q8NDH2 2452 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 IQCJQ1A5X6 159 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 MEGF9Q9H1U4 602 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 VCX2Q9H322 139 aa10.07□□□□□ -0.8
LIN54-201ENST00000340417 NMBP08949 121 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 ZNF876PQ49A33 203 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 RNASE1P07998 156 aaKnown RBP10.06□□□□□ -0.8
LIN54-201ENST00000340417 NMUP48645 174 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 POU2AF1Q16633 256 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 TEX48A0A1B0GUV7 120 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 CRLF1O75462 422 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 CGB3P0DN86 165 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 CBLN2Q8IUK8 224 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 FREM1Q5H8C1 2179 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 IGHV1OR15-1A0A075B7D0 117 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 IGLC7A0M8Q6 106 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 TRBV9A0A0B4J1U6 114 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 CSTL1Q9H114 145 aa10.06□□□□□ -0.8
LIN54-201ENST00000340417 HNRNPA3P51991 378 aaKnown RBP10.05□□□□□ -0.8
LIN54-201ENST00000340417 HILS1P60008 231 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 PRR25Q96S07 402 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 LEPROTL1O95214 131 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
LIN54-201ENST00000340417 Q6ZSV7 163 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 Q6ZSR3 168 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 LY6G5BQ8NDX9 201 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 PRRC2AP48634 2157 aaKnown RBP10.05□□□□□ -0.8
LIN54-201ENST00000340417 MED12LQ86YW9 2145 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 IGHV3-16A0A0C4DH30 117 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 IGLC1P0CG04 106 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 PHLDA1Q8WV24 401 aaPredicted RBP10.05□□□□□ -0.8
LIN54-201ENST00000340417 C18orf15Q96N68 181 aa10.05□□□□□ -0.8
LIN54-201ENST00000340417 GAGE12JA6NER3 117 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 H3BRN7 92 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 GAGE1Q13065 139 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 GAGE4Q13068 117 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 GAGE5Q13069 117 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 GAGE13Q4V321 117 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 OR10D4PQ8NGN7 298 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 MRAP2Q96G30 205 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 DYSFO75923 2080 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 TRAV8-1A0A0A6YYK1 113 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 C2orf70A6NJV1 201 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 RMI2Q96E14 147 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 IGF2BP2-AS1Q96M15 143 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 A0A087WWL8 130 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 AGMATQ9BSE5 352 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 IZUMO1RA6ND01 250 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 ZNF295-AS1Q8N0V1 137 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 ANAPC10Q9UM13 185 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 FSTL3O95633 263 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 SPART-AS1P0CW21 52 aa10.04□□□□□ -0.8
LIN54-201ENST00000340417 IGLL1P15814 213 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 ARFGEF3Q5TH69 2177 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 PAX4O43316 350 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 GZMBP10144 247 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 SONP18583 2426 aaKnown RBP10.03□□□□□ -0.8
LIN54-201ENST00000340417 A0A087X0M5 115 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 A0A1B0GX30 115 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 APOHP02749 345 aaPredicted RBP10.03□□□□□ -0.8
LIN54-201ENST00000340417 EVI2AP22794 236 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 PKIAP61925 76 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 ZNF491Q8N8L2 437 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 NOTCH3Q9UM47 2321 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 RHODO00212 210 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 TRAV25A0A0B4J276 109 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 PHOX2AO14813 284 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 SRP19P09132 144 aaKnown RBP10.03□□□□□ -0.8
LIN54-201ENST00000340417 SLAQ13239 276 aa10.03□□□□□ -0.8
LIN54-201ENST00000340417 IGLV2-23P01705 113 aa10.02□□□□□ -0.8
LIN54-201ENST00000340417 OR11H2Q8NH07 326 aa10.02□□□□□ -0.8
LIN54-201ENST00000340417 HIVEP3Q5T1R4 2406 aa10.02□□□□□ -0.81
LIN54-201ENST00000340417 ODF3BA8MYP8 253 aa10.02□□□□□ -0.81
LIN54-201ENST00000340417 C14orf178Q8N769 122 aaPredicted RBP10.02□□□□□ -0.81
LIN54-201ENST00000340417 A0A096LPF7 62 aa10.02□□□□□ -0.81
LIN54-201ENST00000340417 A0A0J9YY99 117 aa10.02□□□□□ -0.81
LIN54-201ENST00000340417 NOP10Q9NPE3 64 aaKnown RBP10.02□□□□□ -0.81
LIN54-201ENST00000340417 C5orf52A6NGY3 159 aa10.02□□□□□ -0.81
LIN54-201ENST00000340417 ATP5LO75964 103 aa10.02□□□□□ -0.81
LIN54-201ENST00000340417 TRBV19A0A075B6N1 114 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 TGIF2-C20orf24A0A0A6YYL0 155 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 CDX1P47902 265 aaPredicted RBP10.01□□□□□ -0.81
LIN54-201ENST00000340417 SSBP2P81877 361 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms