RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PRR20DP86480 221 aa11.7□□□□□ -0.54
RET-201ENST00000340058 PRR20BP86481 221 aa11.7□□□□□ -0.54
RET-201ENST00000340058 PRR20AP86496 221 aa11.7□□□□□ -0.54
RET-201ENST00000340058 ARL17AQ8IVW1 177 aa11.7□□□□□ -0.54
RET-201ENST00000340058 C8orf49Q96NF6 230 aa11.7□□□□□ -0.54
RET-201ENST00000340058 MRPL36Q9P0J6 103 aaKnown RBP11.7□□□□□ -0.54
RET-201ENST00000340058 KIAA1549Q9HCM3 1950 aa11.7□□□□□ -0.54
RET-201ENST00000340058 TRAV9-1A0A075B6T8 112 aa11.69□□□□□ -0.54
RET-201ENST00000340058 IGHV2-70DA0A0C4DH43 119 aa11.69□□□□□ -0.54
RET-201ENST00000340058 TMEM213A2RRL7 107 aa11.69□□□□□ -0.54
RET-201ENST00000340058 SPRY2O43597 315 aa11.69□□□□□ -0.54
RET-201ENST00000340058 IGHV2-70P01814 119 aa11.69□□□□□ -0.54
RET-201ENST00000340058 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
RET-201ENST00000340058 TMEM75Q8N9X5 138 aa11.69□□□□□ -0.54
RET-201ENST00000340058 SCGB3A1Q96QR1 104 aa11.69□□□□□ -0.54
RET-201ENST00000340058 HIST1H4GQ99525 98 aa11.69□□□□□ -0.54
RET-201ENST00000340058 CRXO43186 299 aaPredicted RBP11.69□□□□□ -0.54
RET-201ENST00000340058 NSUN5P1Q3KNT7 163 aa11.69□□□□□ -0.54
RET-201ENST00000340058 ACTL10Q5JWF8 245 aa11.69□□□□□ -0.54
RET-201ENST00000340058 LINC00311Q8N616 119 aa11.69□□□□□ -0.54
RET-201ENST00000340058 DNLZQ5SXM8 178 aa11.69□□□□□ -0.54
RET-201ENST00000340058 IGHV4-61A0A0C4DH41 118 aa11.68□□□□□ -0.54
RET-201ENST00000340058 TOMM40O96008 361 aa11.68□□□□□ -0.54
RET-201ENST00000340058 RIPPLY3P57055 190 aa11.68□□□□□ -0.54
RET-201ENST00000340058 BRWD1-AS2P59051 145 aa11.68□□□□□ -0.54
RET-201ENST00000340058 TMEM95Q3KNT9 176 aa11.68□□□□□ -0.54
RET-201ENST00000340058 Q86TA4 180 aa11.68□□□□□ -0.54
RET-201ENST00000340058 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
RET-201ENST00000340058 IGKV3D-20A0A0C4DH25 116 aa11.68□□□□□ -0.54
RET-201ENST00000340058 A6NDN8 102 aa11.68□□□□□ -0.54
RET-201ENST00000340058 IGHV1-69P01742 117 aa11.68□□□□□ -0.54
RET-201ENST00000340058 JMJD8Q96S16 334 aa11.68□□□□□ -0.54
RET-201ENST00000340058 NCOR1P1Q9H4R4 102 aa11.68□□□□□ -0.54
RET-201ENST00000340058 IGKV1OR2-108A0A075B7D4 117 aa11.68□□□□□ -0.54
RET-201ENST00000340058 PSG3Q16557 428 aa11.68□□□□□ -0.54
RET-201ENST00000340058 C21orf62-AS1Q17RA5 79 aa11.67□□□□□ -0.54
RET-201ENST00000340058 C10orf91Q5T1B1 145 aa11.67□□□□□ -0.54
RET-201ENST00000340058 Q6AWC8 147 aa11.67□□□□□ -0.54
RET-201ENST00000340058 C1orf229Q6ZS94 237 aaPredicted RBP11.67□□□□□ -0.54
RET-201ENST00000340058 C3orf79P0CE67 100 aa11.67□□□□□ -0.54
RET-201ENST00000340058 POU2AF1Q16633 256 aa11.67□□□□□ -0.54
RET-201ENST00000340058 IGF2-ASQ6U949 168 aa11.67□□□□□ -0.54
RET-201ENST00000340058 C14orf178Q8N769 122 aaPredicted RBP11.67□□□□□ -0.54
RET-201ENST00000340058 TRAV21A0A0B4J279 112 aa11.67□□□□□ -0.54
RET-201ENST00000340058 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
RET-201ENST00000340058 HTN3P15516 51 aa11.67□□□□□ -0.54
RET-201ENST00000340058 SOX21Q9Y651 276 aaPredicted RBP11.67□□□□□ -0.54
RET-201ENST00000340058 DSCAML1Q8TD84 2053 aa11.66□□□□□ -0.54
RET-201ENST00000340058 hDV102S1A0JD36 115 aa11.66□□□□□ -0.54
RET-201ENST00000340058 ZNF418Q8TF45 676 aaPredicted RBP11.66□□□□□ -0.54
RET-201ENST00000340058 C12orf54Q6X4T0 127 aa11.66□□□□□ -0.54
RET-201ENST00000340058 OR11H12B2RN74 326 aa11.66□□□□□ -0.54
RET-201ENST00000340058 OR11H1Q8NG94 326 aa11.66□□□□□ -0.54
RET-201ENST00000340058 OR11H2Q8NH07 326 aa11.66□□□□□ -0.54
RET-201ENST00000340058 NAA38Q9BRA0 125 aaKnown RBP11.66□□□□□ -0.54
RET-201ENST00000340058 TRBV19A0A075B6N1 114 aa11.65□□□□□ -0.54
RET-201ENST00000340058 FAM181BA6NEQ2 426 aa11.65□□□□□ -0.54
RET-201ENST00000340058 Q5PR19 223 aa11.65□□□□□ -0.54
RET-201ENST00000340058 VPS13AQ96RL7 3174 aa11.65□□□□□ -0.54
RET-201ENST00000340058 TRANK1O15050 2925 aa11.65□□□□□ -0.54
RET-201ENST00000340058 FNDC10F2Z333 226 aa11.65□□□□□ -0.54
RET-201ENST00000340058 NDUFS6O75380 124 aaKnown RBP11.65□□□□□ -0.54
RET-201ENST00000340058 SLAQ13239 276 aa11.65□□□□□ -0.54
RET-201ENST00000340058 ODF3L1Q8IXM7 274 aa11.65□□□□□ -0.54
RET-201ENST00000340058 LYPD6BQ8NI32 183 aa11.65□□□□□ -0.54
RET-201ENST00000340058 FXYD5Q96DB9 178 aa11.65□□□□□ -0.54
RET-201ENST00000340058 NDUFAF3Q9BU61 184 aa11.65□□□□□ -0.54
RET-201ENST00000340058 F2Z2F3 143 aa11.65□□□□□ -0.55
RET-201ENST00000340058 K7EN84 100 aa11.65□□□□□ -0.55
RET-201ENST00000340058 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.55
RET-201ENST00000340058 UBE2E2Q96LR5 201 aa11.64□□□□□ -0.55
RET-201ENST00000340058 SZT2Q5T011 3432 aa11.64□□□□□ -0.55
RET-201ENST00000340058 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
RET-201ENST00000340058 ZFP36P26651 326 aaKnown RBP11.64□□□□□ -0.55
RET-201ENST00000340058 BLCAPP62952 87 aa11.64□□□□□ -0.55
RET-201ENST00000340058 GUSBP1Q15486 140 aa11.64□□□□□ -0.55
RET-201ENST00000340058 CDPF1Q6NVV7 123 aa11.64□□□□□ -0.55
RET-201ENST00000340058 ZNF664Q8N3J9 261 aa11.64□□□□□ -0.55
RET-201ENST00000340058 NUP210LQ5VU65 1888 aa11.64□□□□□ -0.55
RET-201ENST00000340058 IGHV4-30-2A0A087WSY4 118 aa11.64□□□□□ -0.55
RET-201ENST00000340058 Q96MF0 132 aa11.64□□□□□ -0.55
RET-201ENST00000340058 V9GYV3 84 aa11.64□□□□□ -0.55
RET-201ENST00000340058 A0A087WWL8 130 aa11.63□□□□□ -0.55
RET-201ENST00000340058 OR10J3Q5JRS4 329 aa11.63□□□□□ -0.55
RET-201ENST00000340058 ZNF491Q8N8L2 437 aa11.63□□□□□ -0.55
RET-201ENST00000340058 KLHL30-AS1Q8NEE0 82 aa11.63□□□□□ -0.55
RET-201ENST00000340058 IGHV2-5P01817 119 aa11.63□□□□□ -0.55
RET-201ENST00000340058 VGLL1Q99990 258 aa11.63□□□□□ -0.55
RET-201ENST00000340058 IGHV3-64A0A075B6Q5 118 aa11.63□□□□□ -0.55
RET-201ENST00000340058 TRGV2A0A075B6R0 118 aa11.63□□□□□ -0.55
RET-201ENST00000340058 IGKV1-17P01599 117 aa11.63□□□□□ -0.55
RET-201ENST00000340058 HBDP02042 147 aa11.63□□□□□ -0.55
RET-201ENST00000340058 IGHV4-38-2P0DP08 117 aa11.63□□□□□ -0.55
RET-201ENST00000340058 PATE2Q6UY27 113 aa11.63□□□□□ -0.55
RET-201ENST00000340058 IFI27L1Q96BM0 104 aa11.63□□□□□ -0.55
RET-201ENST00000340058 LINC00477Q96M19 166 aa11.63□□□□□ -0.55
RET-201ENST00000340058 MIEN1Q9BRT3 115 aa11.63□□□□□ -0.55
RET-201ENST00000340058 LAMTOR2Q9Y2Q5 125 aa11.63□□□□□ -0.55
RET-201ENST00000340058 TRBV7-1A0A0A6YYK4 115 aa11.62□□□□□ -0.55
RET-201ENST00000340058 F6UB75 175 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms