RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ARV1Q9H2C2 271 aa10.9□□□□□ -0.66
LINC01116-202ENST00000339037 A0A087X0K7 114 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 AGPAT2O15120 278 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 MRPS12O15235 138 aaKnown RBP10.89□□□□□ -0.67
LINC01116-202ENST00000339037 CDKN1BP46527 198 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 PSG3Q16557 428 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 ZNF493Q6ZR52 646 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 SPATA12Q7Z6I5 190 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 S100A7AQ86SG5 101 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 LRRC20Q8TCA0 184 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
LINC01116-202ENST00000339037 MGST2Q99735 147 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 Q9H8V8 135 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 NOP10Q9NPE3 64 aaKnown RBP10.89□□□□□ -0.67
LINC01116-202ENST00000339037 NUDT15Q9NV35 164 aa10.89□□□□□ -0.67
LINC01116-202ENST00000339037 LSM5Q9Y4Y9 91 aaKnown RBP10.89□□□□□ -0.67
LINC01116-202ENST00000339037 FAM25EA8MYX2 175 aa10.88□□□□□ -0.67
LINC01116-202ENST00000339037 GOSR2O14653 212 aa10.88□□□□□ -0.67
LINC01116-202ENST00000339037 ZNF846Q147U1 533 aa10.88□□□□□ -0.67
LINC01116-202ENST00000339037 TTC32Q5I0X7 151 aa10.88□□□□□ -0.67
LINC01116-202ENST00000339037 ZNF546Q86UE3 836 aa10.88□□□□□ -0.67
LINC01116-202ENST00000339037 Q8N1X5 172 aa10.88□□□□□ -0.67
LINC01116-202ENST00000339037 OR10J6PQ8NGY7 276 aa10.88□□□□□ -0.67
LINC01116-202ENST00000339037 RNASE8Q8TDE3 154 aaKnown RBP10.88□□□□□ -0.67
LINC01116-202ENST00000339037 RPUSD4Q96CM3 377 aaKnown RBP10.88□□□□□ -0.67
LINC01116-202ENST00000339037 GNPNAT1Q96EK6 184 aaPredicted RBP10.88□□□□□ -0.67
LINC01116-202ENST00000339037 C11orf1Q9H5F2 150 aa10.88□□□□□ -0.67
LINC01116-202ENST00000339037 TRAV26-1A0A087WT03 109 aa10.87□□□□□ -0.67
LINC01116-202ENST00000339037 H7BYZ3 331 aa10.87□□□□□ -0.67
LINC01116-202ENST00000339037 L7N2F9 121 aa10.87□□□□□ -0.67
LINC01116-202ENST00000339037 SNRPCP09234 159 aaKnown RBP10.87□□□□□ -0.67
LINC01116-202ENST00000339037 VAMP2P63027 116 aa10.87□□□□□ -0.67
LINC01116-202ENST00000339037 OR5I1Q13606 314 aa10.87□□□□□ -0.67
LINC01116-202ENST00000339037 MORN5Q5VZ52 161 aa10.87□□□□□ -0.67
LINC01116-202ENST00000339037 LINC00305Q7Z4B0 112 aa10.87□□□□□ -0.67
LINC01116-202ENST00000339037 ZNF431Q8TF32 576 aaPredicted RBP10.87□□□□□ -0.67
LINC01116-202ENST00000339037 GGACTQ9BVM4 153 aa10.87□□□□□ -0.67
LINC01116-202ENST00000339037 NDUFA13Q9P0J0 144 aa10.87□□□□□ -0.67
LINC01116-202ENST00000339037 M6PRP20645 277 aa10.86□□□□□ -0.67
LINC01116-202ENST00000339037 PXDC1Q5TGL8 231 aa10.86□□□□□ -0.67
LINC01116-202ENST00000339037 TMEM37Q8WXS4 190 aa10.86□□□□□ -0.67
LINC01116-202ENST00000339037 ZNF503Q96F45 646 aa10.86□□□□□ -0.67
LINC01116-202ENST00000339037 KRTAP1-5Q9BYS1 174 aa10.86□□□□□ -0.67
LINC01116-202ENST00000339037 Q9H3A6 140 aa10.86□□□□□ -0.67
LINC01116-202ENST00000339037 RNF24Q9Y225 148 aa10.86□□□□□ -0.67
LINC01116-202ENST00000339037 C5orf51A6NDU8 294 aa10.85□□□□□ -0.67
LINC01116-202ENST00000339037 CST7O76096 145 aa10.85□□□□□ -0.67
LINC01116-202ENST00000339037 BCAP31P51572 246 aa10.85□□□□□ -0.67
LINC01116-202ENST00000339037 CAV2P51636 162 aa10.85□□□□□ -0.67
LINC01116-202ENST00000339037 LCN15Q6UWW0 184 aa10.85□□□□□ -0.67
LINC01116-202ENST00000339037 C12orf45Q8N5I9 185 aaPredicted RBP10.85□□□□□ -0.67
LINC01116-202ENST00000339037 RXFP4Q8TDU9 374 aa10.85□□□□□ -0.67
LINC01116-202ENST00000339037 C20orf144Q9BQM9 153 aa10.85□□□□□ -0.67
LINC01116-202ENST00000339037 CCDC32Q9BV29 185 aa10.85□□□□□ -0.67
LINC01116-202ENST00000339037 SCRT2Q9NQ03 307 aa10.85□□□□□ -0.67
LINC01116-202ENST00000339037 FAM24AA6NFZ4 105 aa10.84□□□□□ -0.67
LINC01116-202ENST00000339037 H3BTX0 84 aa10.84□□□□□ -0.67
LINC01116-202ENST00000339037 SLC17A3O00476 420 aa10.84□□□□□ -0.67
LINC01116-202ENST00000339037 COX7A2P2O60397 106 aa10.84□□□□□ -0.67
LINC01116-202ENST00000339037 CXCL2P19875 107 aa10.84□□□□□ -0.67
LINC01116-202ENST00000339037 CAMLGP49069 296 aa10.84□□□□□ -0.67
LINC01116-202ENST00000339037 OPCMLQ14982 345 aa10.84□□□□□ -0.67
LINC01116-202ENST00000339037 CCDC28AQ8IWP9 274 aa10.84□□□□□ -0.67
LINC01116-202ENST00000339037 C2orf50Q96LR7 162 aa10.84□□□□□ -0.67
LINC01116-202ENST00000339037 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
LINC01116-202ENST00000339037 A0A0J9YY99 117 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 S100A10P60903 97 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 KIR3DS1Q14943 382 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 GFI1BQ5VTD9 330 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 C10orf113Q5VZT2 155 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 MIC13Q5XKP0 118 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 NRARPQ7Z6K4 114 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 BPIFA4PQ86YQ2 179 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 LINC00612Q8N6U2 182 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 SLC50A1Q9BRV3 221 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 UPK3BQ9BT76 320 aa10.83□□□□□ -0.68
LINC01116-202ENST00000339037 DMBT1Q9UGM3 2413 aaPredicted RBP10.83□□□□□ -0.68
LINC01116-202ENST00000339037 A0A1W2PPQ1 181 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 IGSF23A1L1A6 192 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 GAGE7O76087 117 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 RLN2P04090 185 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 GAGE12FP0CL80 117 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 GAGE12GP0CL81 117 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 GAGE12IP0CL82 117 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 IGLC2P0DOY2 106 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 BTF3P20290 206 aaKnown RBP10.82□□□□□ -0.68
LINC01116-202ENST00000339037 HOXA5P20719 270 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 KRTAP10-2P60368 255 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 IL15RAQ13261 267 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 RAB32Q13637 225 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 PARD6GQ9BYG4 376 aaPredicted RBP10.82□□□□□ -0.68
LINC01116-202ENST00000339037 LYRM2Q9NU23 88 aaPredicted RBP10.82□□□□□ -0.68
LINC01116-202ENST00000339037 UQCC1Q9NVA1 299 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 WDR83OSQ9Y284 106 aa10.82□□□□□ -0.68
LINC01116-202ENST00000339037 TRAV5A0A0B4J249 113 aa10.81□□□□□ -0.68
LINC01116-202ENST00000339037 UBE2L5PA0A1B0GUS4 154 aa10.81□□□□□ -0.68
LINC01116-202ENST00000339037 FAM240BA0A1B0GVZ2 78 aa10.81□□□□□ -0.68
LINC01116-202ENST00000339037 SNURFLB1AK76 121 aa10.81□□□□□ -0.68
LINC01116-202ENST00000339037 PRAC2D3DTV9 90 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms