RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 HAPLN4Q86UW8 402 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 TRBV24-1A0A075B6N3 115 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 IGLC1P0CG04 106 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 C22orf34Q6ZV56 151 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 GNB1LQ9BYB4 327 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 CXCL1P09341 107 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 DEFB104AQ8WTQ1 72 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 VCX2Q9H322 139 aa11.29□□□□□ -0.6
PARVB-201ENST00000338758 NXT2Q9NPJ8 142 aaKnown RBP11.29□□□□□ -0.6
PARVB-201ENST00000338758 LOC107984156A0A0G2JMH3 177 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 LINC00614P0C842 121 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 ARL17AQ8IVW1 177 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
PARVB-201ENST00000338758 ZNF106Q9H2Y7 1883 aaKnown RBP11.28□□□□□ -0.6
PARVB-201ENST00000338758 ELANEP08246 267 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
PARVB-201ENST00000338758 TMEM95Q3KNT9 176 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 DNLZQ5SXM8 178 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 TMEM242Q9NWH2 141 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 EML6Q6ZMW3 1958 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 DSCAMO60469 2012 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 IGLC7A0M8Q6 106 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST1H2BKO60814 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST1H2BJP06899 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST1H2BOP23527 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST1H2BBP33778 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST1H2BDP58876 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST1H2BCP62807 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST2H2BEQ16778 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST1H2BHQ93079 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST1H2BNQ99877 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 HIST1H2BMQ99879 126 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 ZMAT5Q9UDW3 170 aaKnown RBP11.28□□□□□ -0.6
PARVB-201ENST00000338758 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 ATP5L2Q7Z4Y8 100 aa11.28□□□□□ -0.6
PARVB-201ENST00000338758 NDUFA4O00483 81 aa11.27□□□□□ -0.6
PARVB-201ENST00000338758 TCF21O43680 179 aa11.27□□□□□ -0.6
PARVB-201ENST00000338758 INSP01308 110 aa11.27□□□□□ -0.6
PARVB-201ENST00000338758 BLCAPP62952 87 aa11.27□□□□□ -0.6
PARVB-201ENST00000338758 FOXL1Q12952 345 aa11.27□□□□□ -0.6
PARVB-201ENST00000338758 COTL1Q14019 142 aa11.27□□□□□ -0.6
PARVB-201ENST00000338758 CYSLTR1Q9Y271 337 aa11.27□□□□□ -0.6
PARVB-201ENST00000338758 SNAI2O43623 268 aa11.27□□□□□ -0.61
PARVB-201ENST00000338758 ZNF415Q09FC8 603 aa11.27□□□□□ -0.61
PARVB-201ENST00000338758 Q86TA4 180 aa11.27□□□□□ -0.61
PARVB-201ENST00000338758 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
PARVB-201ENST00000338758 SRSF1Q07955 248 aaKnown RBP eCLIP11.27□□□□□ -0.61
PARVB-201ENST00000338758 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
PARVB-201ENST00000338758 MRAP2Q96G30 205 aa11.27□□□□□ -0.61
PARVB-201ENST00000338758 IGKV3D-20A0A0C4DH25 116 aa11.27□□□□□ -0.61
PARVB-201ENST00000338758 C14orf144Q96I85 54 aa11.27□□□□□ -0.61
PARVB-201ENST00000338758 ZFP36P26651 326 aaKnown RBP11.26□□□□□ -0.61
PARVB-201ENST00000338758 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
PARVB-201ENST00000338758 PTPRSQ13332 1948 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 CEP192Q8TEP8 1941 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 C19orf84I3L1E1 186 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 HBDP02042 147 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 HOXA5P20719 270 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 MST1LQ2TV78 715 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 PRDM13Q9H4Q3 707 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 COL5A1-AS1Q5SY13 56 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 LY96Q9Y6Y9 160 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 C9JQL5 133 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 NUP35Q8NFH5 326 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 NDUFA3O95167 84 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 COX6CP09669 75 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 ZNF876PQ49A33 203 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 C1orf194Q5T5A4 169 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 ST6GALNAC6Q969X2 333 aa11.26□□□□□ -0.61
PARVB-201ENST00000338758 D6R8Y8 96 aa11.25□□□□□ -0.61
PARVB-201ENST00000338758 EPG5Q9HCE0 2579 aa11.25□□□□□ -0.61
PARVB-201ENST00000338758 DEFB130BP0DP73 79 aa11.25□□□□□ -0.61
PARVB-201ENST00000338758 DEFB130AP0DP74 79 aa11.25□□□□□ -0.61
PARVB-201ENST00000338758 IL15RAQ13261 267 aa11.25□□□□□ -0.61
PARVB-201ENST00000338758 C8orf86Q6ZUL3 223 aa11.25□□□□□ -0.61
PARVB-201ENST00000338758 ARMS2P0C7Q2 107 aa11.25□□□□□ -0.61
PARVB-201ENST00000338758 ORMDL2Q53FV1 153 aa11.25□□□□□ -0.61
PARVB-201ENST00000338758 DDTP30046 118 aa11.24□□□□□ -0.61
PARVB-201ENST00000338758 NIT1Q86X76 327 aa11.24□□□□□ -0.61
PARVB-201ENST00000338758 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
PARVB-201ENST00000338758 COLCA2A8K830 154 aa11.24□□□□□ -0.61
PARVB-201ENST00000338758 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
PARVB-201ENST00000338758 TTC9CQ8N5M4 171 aa11.24□□□□□ -0.61
PARVB-201ENST00000338758 KIAA1549LQ6ZVL6 1849 aa11.24□□□□□ -0.61
PARVB-201ENST00000338758 A0A087WX48 190 aa11.24□□□□□ -0.61
PARVB-201ENST00000338758 H3BRM9 83 aa11.24□□□□□ -0.61
PARVB-201ENST00000338758 ZNF726P1Q15940 193 aa11.24□□□□□ -0.61
PARVB-201ENST00000338758 PRRC2AP48634 2157 aaKnown RBP11.24□□□□□ -0.61
PARVB-201ENST00000338758 GGTLC3B5MD39 225 aa11.23□□□□□ -0.61
PARVB-201ENST00000338758 ZNF491Q8N8L2 437 aa11.23□□□□□ -0.61
PARVB-201ENST00000338758 OR13C6PQ8NH95 151 aa11.23□□□□□ -0.61
PARVB-201ENST00000338758 ALKBH7Q9BT30 221 aaPredicted RBP11.23□□□□□ -0.61
PARVB-201ENST00000338758 IGHV7-81A0A0B4J1V7 117 aa11.23□□□□□ -0.61
PARVB-201ENST00000338758 RPL36AP83881 106 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms