RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 UBE2L5PA0A1B0GUS4 154 aa9.36□□□□□ -0.91
NUDCD3-201ENST00000338427 CBY3A6NI87 242 aa9.36□□□□□ -0.91
NUDCD3-201ENST00000338427 M0R3E3 92 aa9.36□□□□□ -0.91
NUDCD3-201ENST00000338427 NHLH2Q02577 135 aa9.36□□□□□ -0.91
NUDCD3-201ENST00000338427 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
NUDCD3-201ENST00000338427 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
NUDCD3-201ENST00000338427 SLC50A1Q9BRV3 221 aa9.36□□□□□ -0.91
NUDCD3-201ENST00000338427 SLC39A9Q9NUM3 307 aa9.36□□□□□ -0.91
NUDCD3-201ENST00000338427 TRAV12-3A0A0B4J271 114 aa9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 PYYP10082 97 aa9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 SULT1A1P50225 295 aa9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 IFITM3Q01628 133 aa9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 BAXQ07812 192 aa9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 RAB31Q13636 194 aa9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 VWC2Q2TAL6 325 aa9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 OR10J6PQ8NGY7 276 aa9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 LYRM2Q9NU23 88 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 TIMM8BQ9Y5J9 83 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-201ENST00000338427 RYR1P21817 5038 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 PCLOQ9Y6V0 5065 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 NDUFB4O95168 129 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 ATP5G1P05496 136 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 CXCL2P19875 107 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 FGF7P21781 194 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 S100A11P31949 105 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 RPL29P47914 159 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 ATP5G3P48201 142 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 OR5I1Q13606 314 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 Q6ZQT7 251 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 TMEM256Q8N2U0 113 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 OR1L4Q8NGR5 311 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 RNASE8Q8TDE3 154 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 RNF141Q8WVD5 230 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 ATG101Q9BSB4 218 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 CCDC32Q9BV29 185 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 GPN1Q9HCN4 374 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 LINC00588Q9Y4M8 146 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 PXMP4Q9Y6I8 212 aa9.34□□□□□ -0.91
NUDCD3-201ENST00000338427 A0A0J9YY99 117 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 GAGE12BA1L429 117 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 H0YIZ8 118 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 H7BYZ3 331 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 GAGE7O76087 117 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 GAGE12FP0CL80 117 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 GAGE12GP0CL81 117 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 GAGE12IP0CL82 117 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 PVALBP20472 110 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 HOXA5P20719 270 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 ZNF575Q86XF7 245 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 EXOC3-AS1Q8N2X6 119 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 ZNRF2Q8NHG8 242 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 THAP6Q8TBB0 222 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 C16orf74Q96GX8 76 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 AGPAT4-IT1Q9H0P7 198 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 OR5AC2Q9NZP5 309 aa9.33□□□□□ -0.92
NUDCD3-201ENST00000338427 TRBV19A0A075B6N1 114 aa9.32□□□□□ -0.92
NUDCD3-201ENST00000338427 NPIPB6E9PJ23 425 aa9.32□□□□□ -0.92
NUDCD3-201ENST00000338427 CD300CQ08708 224 aa9.32□□□□□ -0.92
NUDCD3-201ENST00000338427 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
NUDCD3-201ENST00000338427 MZT2BQ6NZ67 158 aa9.32□□□□□ -0.92
NUDCD3-201ENST00000338427 ZNF493Q6ZR52 646 aa9.32□□□□□ -0.92
NUDCD3-201ENST00000338427 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
NUDCD3-201ENST00000338427 RNF24Q9Y225 148 aa9.32□□□□□ -0.92
NUDCD3-201ENST00000338427 HIST1H1EP10412 219 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-201ENST00000338427 TNP2Q05952 138 aa9.31□□□□□ -0.92
NUDCD3-201ENST00000338427 ASAH1Q13510 395 aa9.31□□□□□ -0.92
NUDCD3-201ENST00000338427 ATP6V1FQ16864 119 aa9.31□□□□□ -0.92
NUDCD3-201ENST00000338427 LRRC37A5PQ49AS3 106 aa9.31□□□□□ -0.92
NUDCD3-201ENST00000338427 CCDC28AQ8IWP9 274 aa9.31□□□□□ -0.92
NUDCD3-201ENST00000338427 TMEM263Q8WUH6 116 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-201ENST00000338427 FAM167A-AS1Q96KT0 104 aa9.31□□□□□ -0.92
NUDCD3-201ENST00000338427 SLC25A2Q9BXI2 301 aa9.31□□□□□ -0.92
NUDCD3-201ENST00000338427 TRAV26-1A0A087WT03 109 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 EIF3GO75821 320 aaKnown RBP eCLIP9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 RNASE4P34096 147 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 HBG1P69891 147 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 HBG2P69892 147 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 BTN1A1Q13410 526 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 CLINT1Q14677 625 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 GUK1Q16774 197 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 Q6ZTI0 123 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 STX12Q86Y82 276 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 LINC00612Q8N6U2 182 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 OR5C1Q8NGR4 320 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 CHAC2Q8WUX2 184 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 PFDN5Q99471 154 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 VGLL1Q99990 258 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 NPCDR1Q9BY65 106 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 GSN-AS1Q9NRJ2 163 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 TIMM9Q9Y5J7 89 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 LRP1BQ9NZR2 4599 aa9.3□□□□□ -0.92
NUDCD3-201ENST00000338427 IGKV2-40A0A087WW87 121 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 NBDYA0A0U1RRE5 68 aa9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 ZNF324O75467 553 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 IGKV2D-40P01614 121 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 LEPP41159 167 aa9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 ICAM4Q14773 271 aa9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 ESRGQ1W209 222 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms