RNA–Protein interactions for RNA: ENST00000336840.10

PAX3-202, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-202ENST00000336840 DIRC3C9JPN6 131 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 ISLRO14498 428 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 CSN1S1P47710 185 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 CNN1P51911 297 aaKnown RBP9.48□□□□□ -0.89
PAX3-202ENST00000336840 DYNLRB2Q8TF09 96 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 ZNF747Q9BV97 191 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 MS4A6AQ9H2W1 248 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 NAT8Q9UHE5 227 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 RPH3ALQ9UNE2 315 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 TRBV20OR9-2A0A075B6H5 130 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 IGKV3-7A0A075B6H7 116 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 TAS2R60P59551 318 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 TMEM183BQ1AE95 376 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 DEFB114Q30KQ6 69 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 SVBPQ8N300 66 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 RNF182Q8N6D2 247 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 TMEM158Q8WZ71 300 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 IGF2BP2-AS1Q96M15 143 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 SDF2L1Q9HCN8 221 aa9.48□□□□□ -0.89
PAX3-202ENST00000336840 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
PAX3-202ENST00000336840 S100A9P06702 114 aaKnown RBP9.47□□□□□ -0.89
PAX3-202ENST00000336840 PSG3Q16557 428 aa9.47□□□□□ -0.89
PAX3-202ENST00000336840 LCN12Q6JVE5 192 aa9.47□□□□□ -0.89
PAX3-202ENST00000336840 GOLT1AQ6ZVE7 132 aa9.47□□□□□ -0.89
PAX3-202ENST00000336840 TMEM75Q8N9X5 138 aa9.47□□□□□ -0.89
PAX3-202ENST00000336840 TVP23CQ96ET8 276 aa9.47□□□□□ -0.89
PAX3-202ENST00000336840 FMC1Q96HJ9 113 aa9.47□□□□□ -0.89
PAX3-202ENST00000336840 LINC00479Q96M42 142 aa9.47□□□□□ -0.89
PAX3-202ENST00000336840 TRBV6-1A0A0K0K1D8 114 aa9.46□□□□□ -0.89
PAX3-202ENST00000336840 K7EQG2 157 aa9.46□□□□□ -0.89
PAX3-202ENST00000336840 K7EQM0 130 aa9.46□□□□□ -0.89
PAX3-202ENST00000336840 TSPAN4O14817 238 aa9.46□□□□□ -0.89
PAX3-202ENST00000336840 PNRC1Q12796 327 aaPredicted RBP9.46□□□□□ -0.89
PAX3-202ENST00000336840 TMEM241Q24JQ0 296 aa9.46□□□□□ -0.89
PAX3-202ENST00000336840 TMEM61Q8N0U2 210 aa9.46□□□□□ -0.89
PAX3-202ENST00000336840 GBGT1Q8N5D6 347 aa9.46□□□□□ -0.89
PAX3-202ENST00000336840 C20orf173Q96LM9 149 aa9.46□□□□□ -0.89
PAX3-202ENST00000336840 TRAV34A0A0B4J273 112 aa9.46□□□□□ -0.9
PAX3-202ENST00000336840 TRAV25A0A0B4J276 109 aa9.46□□□□□ -0.9
PAX3-202ENST00000336840 ZNF705FA8MVS1 300 aaPredicted RBP9.46□□□□□ -0.9
PAX3-202ENST00000336840 SNAPINO95295 136 aa9.46□□□□□ -0.9
PAX3-202ENST00000336840 IGLV2-11P01706 119 aa9.46□□□□□ -0.9
PAX3-202ENST00000336840 ID1P41134 155 aa9.46□□□□□ -0.9
PAX3-202ENST00000336840 UBE2G1P62253 170 aa9.46□□□□□ -0.9
PAX3-202ENST00000336840 CENPWQ5EE01 88 aa9.46□□□□□ -0.9
PAX3-202ENST00000336840 LY96Q9Y6Y9 160 aa9.46□□□□□ -0.9
PAX3-202ENST00000336840 RBAKDNA6NC62 111 aa9.45□□□□□ -0.9
PAX3-202ENST00000336840 DNASE2O00115 360 aaPredicted RBP9.45□□□□□ -0.9
PAX3-202ENST00000336840 GNG4P50150 75 aa9.45□□□□□ -0.9
PAX3-202ENST00000336840 RPL23P62829 140 aaKnown RBP9.45□□□□□ -0.9
PAX3-202ENST00000336840 PAFAH1B2P68402 229 aa9.45□□□□□ -0.9
PAX3-202ENST00000336840 CD300EQ496F6 205 aaPredicted RBP9.45□□□□□ -0.9
PAX3-202ENST00000336840 RBPMS2Q6ZRY4 209 aaKnown RBP9.45□□□□□ -0.9
PAX3-202ENST00000336840 CLRN3Q8NCR9 226 aa9.45□□□□□ -0.9
PAX3-202ENST00000336840 STAB1Q9NY15 2570 aa9.45□□□□□ -0.9
PAX3-202ENST00000336840 SORL1Q92673 2214 aa9.45□□□□□ -0.9
PAX3-202ENST00000336840 TRRAPQ9Y4A5 3859 aa9.45□□□□□ -0.9
PAX3-202ENST00000336840 ANK2Q01484 3957 aa9.45□□□□□ -0.9
PAX3-202ENST00000336840 IGKV2-40A0A087WW87 121 aaPredicted RBP9.44□□□□□ -0.9
PAX3-202ENST00000336840 FBLL1A6NHQ2 334 aaKnown RBP9.44□□□□□ -0.9
PAX3-202ENST00000336840 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 IGKV2D-40P01614 121 aaPredicted RBP9.44□□□□□ -0.9
PAX3-202ENST00000336840 Q86TA4 180 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 SMIM12Q96EX1 92 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 VWFP04275 2813 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 CMYA5Q8N3K9 4069 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 TRAV8-1A0A0A6YYK1 113 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 PGPEP1LA6NFU8 196 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 SAP30O75446 220 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 LTAP01374 205 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 IGLV2-8P01709 118 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 TFPI2P48307 235 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 FLI1Q01543 452 aaPredicted RBP9.44□□□□□ -0.9
PAX3-202ENST00000336840 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 WFDC3Q8IUB2 231 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 FAM24BQ8N5W8 94 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 ZNF738Q8NE65 137 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
PAX3-202ENST00000336840 COL6A5A8TX70 2615 aa9.44□□□□□ -0.9
PAX3-202ENST00000336840 M0R036 132 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 IGLV1-51P01701 117 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 PRB4P10163 310 aaPredicted RBP9.43□□□□□ -0.9
PAX3-202ENST00000336840 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
PAX3-202ENST00000336840 ADIRFQ15847 76 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 SHISA2Q6UWI4 295 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 C12orf54Q6X4T0 127 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 C3orf56Q8N813 242 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 OR2K2Q8NGT1 345 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 OCC1Q8TAD7 63 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 SGK494Q96LW2 274 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 PSG8Q9UQ74 426 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 ATRAIDQ6UW56 229 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 BAGE2Q86Y30 109 aa9.43□□□□□ -0.9
PAX3-202ENST00000336840 IZUMO1RA6ND01 250 aa9.42□□□□□ -0.9
PAX3-202ENST00000336840 K7EN84 100 aa9.42□□□□□ -0.9
PAX3-202ENST00000336840 ZNF688P0C7X2 276 aa9.42□□□□□ -0.9
PAX3-202ENST00000336840 RHEBQ15382 184 aa9.42□□□□□ -0.9
PAX3-202ENST00000336840 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
PAX3-202ENST00000336840 PRNTQ86SH4 94 aa9.42□□□□□ -0.9
PAX3-202ENST00000336840 VGLL1Q99990 258 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms