RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 FAM74A1Q5RGS3 127 aa14.29□□□□□ -0.12
UBE2E2-201ENST00000335798 RPUSD4Q96CM3 377 aaKnown RBP14.29□□□□□ -0.12
UBE2E2-201ENST00000335798 B9D2Q9BPU9 175 aa14.29□□□□□ -0.12
UBE2E2-201ENST00000335798 Q9H3A6 140 aa14.29□□□□□ -0.12
UBE2E2-201ENST00000335798 PRAC2D3DTV9 90 aa14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 RANP62826 216 aaKnown RBP14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 ICAM4Q14773 271 aa14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 ALKAL2Q6UX46 152 aa14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 STHQ8IWL8 128 aa14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 CLUHP3Q96NS8 147 aa14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 TMPRSS5Q9H3S3 457 aa14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 AAMDCQ9H7C9 122 aa14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 TMEM167BQ9NRX6 74 aa14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 PRELID1Q9Y255 219 aa14.28□□□□□ -0.12
UBE2E2-201ENST00000335798 PRB4P10163 310 aaPredicted RBP14.27□□□□□ -0.12
UBE2E2-201ENST00000335798 RPL35AP18077 110 aaKnown RBP14.27□□□□□ -0.12
UBE2E2-201ENST00000335798 HAGHQ16775 308 aa14.27□□□□□ -0.12
UBE2E2-201ENST00000335798 SBSPONQ8IVN8 264 aa14.27□□□□□ -0.12
UBE2E2-201ENST00000335798 KIR2DL5BA0A0G2JN68 375 aa14.26□□□□□ -0.13
UBE2E2-201ENST00000335798 KIR2DL5BA0A0G2JPC4 375 aa14.26□□□□□ -0.13
UBE2E2-201ENST00000335798 H2AFB1P0C5Y9 115 aa14.26□□□□□ -0.13
UBE2E2-201ENST00000335798 EBLN2Q6P2I7 272 aa14.26□□□□□ -0.13
UBE2E2-201ENST00000335798 KIR2DL5AQ8N109 375 aa14.26□□□□□ -0.13
UBE2E2-201ENST00000335798 OR8A1Q8NGG7 326 aa14.26□□□□□ -0.13
UBE2E2-201ENST00000335798 KIR2DL5BQ8NHK3 375 aa14.26□□□□□ -0.13
UBE2E2-201ENST00000335798 SFT2D1Q8WV19 159 aa14.26□□□□□ -0.13
UBE2E2-201ENST00000335798 ZNF705DP0CH99 300 aaPredicted RBP14.25□□□□□ -0.13
UBE2E2-201ENST00000335798 ZNF705BP0CI00 300 aaPredicted RBP14.25□□□□□ -0.13
UBE2E2-201ENST00000335798 CNN1P51911 297 aaKnown RBP14.25□□□□□ -0.13
UBE2E2-201ENST00000335798 AMTNQ6UX39 209 aa14.25□□□□□ -0.13
UBE2E2-201ENST00000335798 OTORQ9NRC9 128 aa14.25□□□□□ -0.13
UBE2E2-201ENST00000335798 TRAV1-1A0A0B4J248 108 aa14.24□□□□□ -0.13
UBE2E2-201ENST00000335798 GIG44P09565 113 aaPredicted RBP14.24□□□□□ -0.13
UBE2E2-201ENST00000335798 IQCF2Q8IXL9 164 aa14.24□□□□□ -0.13
UBE2E2-201ENST00000335798 A0A1W2PRE2 83 aa14.23□□□□□ -0.13
UBE2E2-201ENST00000335798 GGTLC3B5MD39 225 aa14.23□□□□□ -0.13
UBE2E2-201ENST00000335798 APOC4P55056 127 aa14.23□□□□□ -0.13
UBE2E2-201ENST00000335798 COL7A1Q02388 2944 aa14.23□□□□□ -0.13
UBE2E2-201ENST00000335798 TM2D3Q9BRN9 247 aa14.23□□□□□ -0.13
UBE2E2-201ENST00000335798 CSTL1Q9H114 145 aa14.23□□□□□ -0.13
UBE2E2-201ENST00000335798 YTHDF2Q9Y5A9 579 aaKnown RBP14.23□□□□□ -0.13
UBE2E2-201ENST00000335798 DNAH9Q9NYC9 4486 aa14.22□□□□□ -0.13
UBE2E2-201ENST00000335798 PGPA6NDG6 321 aa14.22□□□□□ -0.13
UBE2E2-201ENST00000335798 FAM74A7A6NL05 159 aa14.22□□□□□ -0.13
UBE2E2-201ENST00000335798 NPIPB6E9PJ23 425 aa14.22□□□□□ -0.13
UBE2E2-201ENST00000335798 DUSP14O95147 198 aaKnown RBP14.22□□□□□ -0.13
UBE2E2-201ENST00000335798 HIST1H1AQ02539 215 aaPredicted RBP14.22□□□□□ -0.13
UBE2E2-201ENST00000335798 MORN3Q6PF18 240 aaPredicted RBP14.22□□□□□ -0.13
UBE2E2-201ENST00000335798 OR4B1Q8NGF8 309 aa14.22□□□□□ -0.13
UBE2E2-201ENST00000335798 ASCL2Q99929 193 aa14.22□□□□□ -0.13
UBE2E2-201ENST00000335798 A0A1B0GV50 99 aa14.21□□□□□ -0.13
UBE2E2-201ENST00000335798 ZNF705EA8MWA4 302 aaPredicted RBP14.21□□□□□ -0.13
UBE2E2-201ENST00000335798 IGKV3-20P01619 116 aa14.21□□□□□ -0.13
UBE2E2-201ENST00000335798 TEX261Q6UWH6 196 aa14.21□□□□□ -0.13
UBE2E2-201ENST00000335798 ARL6IP6Q8N6S5 226 aa14.21□□□□□ -0.13
UBE2E2-201ENST00000335798 ARL2-SNX15V9GYD0 113 aa14.21□□□□□ -0.13
UBE2E2-201ENST00000335798 IGKV2-40A0A087WW87 121 aaPredicted RBP14.2□□□□□ -0.14
UBE2E2-201ENST00000335798 DIRC3C9JPN6 131 aa14.2□□□□□ -0.14
UBE2E2-201ENST00000335798 UBE2CO00762 179 aa14.2□□□□□ -0.14
UBE2E2-201ENST00000335798 IGKV2D-40P01614 121 aaPredicted RBP14.2□□□□□ -0.14
UBE2E2-201ENST00000335798 UBE2G2P60604 165 aa14.2□□□□□ -0.14
UBE2E2-201ENST00000335798 CCL20P78556 96 aa14.2□□□□□ -0.14
UBE2E2-201ENST00000335798 OR10J6PQ8NGY7 276 aa14.2□□□□□ -0.14
UBE2E2-201ENST00000335798 RXFP4Q8TDU9 374 aa14.2□□□□□ -0.14
UBE2E2-201ENST00000335798 SLC35B3Q9H1N7 401 aa14.2□□□□□ -0.14
UBE2E2-201ENST00000335798 RBAKDNA6NC62 111 aa14.19□□□□□ -0.14
UBE2E2-201ENST00000335798 SUMO1P63165 101 aaKnown RBP14.19□□□□□ -0.14
UBE2E2-201ENST00000335798 C9orf47Q6ZRZ4 202 aa14.19□□□□□ -0.14
UBE2E2-201ENST00000335798 Q6ZWC4 215 aa14.19□□□□□ -0.14
UBE2E2-201ENST00000335798 C5orf17Q8NAS9 161 aa14.19□□□□□ -0.14
UBE2E2-201ENST00000335798 LYPD6BQ8NI32 183 aa14.19□□□□□ -0.14
UBE2E2-201ENST00000335798 CA1P00915 261 aaPredicted RBP14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 HBE1P02100 147 aa14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 CSN1S1P47710 185 aa14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 GNG5P63218 68 aa14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 CCDC28AQ8IWP9 274 aa14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 CSNK1G2-AS1Q8NCQ2 148 aa14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 ZNF680Q8NEM1 530 aa14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 VGLL1Q99990 258 aa14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 AGPAT4-IT1Q9H0P7 198 aa14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 TENM3Q9P273 2699 aa14.18□□□□□ -0.14
UBE2E2-201ENST00000335798 SLC25A5P05141 298 aaKnown RBP14.17□□□□□ -0.14
UBE2E2-201ENST00000335798 CT45A10P0DMU9 189 aa14.17□□□□□ -0.14
UBE2E2-201ENST00000335798 NUTF2P61970 127 aaKnown RBP14.17□□□□□ -0.14
UBE2E2-201ENST00000335798 ERCC8Q13216 396 aa14.17□□□□□ -0.14
UBE2E2-201ENST00000335798 CMTM2Q8TAZ6 248 aa14.17□□□□□ -0.14
UBE2E2-201ENST00000335798 FAM19A4Q96LR4 140 aa14.17□□□□□ -0.14
UBE2E2-201ENST00000335798 ODF3Q96PU9 254 aa14.17□□□□□ -0.14
UBE2E2-201ENST00000335798 NKX6-2Q9C056 277 aaPredicted RBP14.17□□□□□ -0.14
UBE2E2-201ENST00000335798 PAGE4O60829 102 aa14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 TCRAP04437 139 aa14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 NHLRC4P0CG21 123 aaPredicted RBP14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 FXYD7P58549 80 aa14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 BLOC1S1P78537 153 aa14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 PMS2P11Q13670 270 aa14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 DEFB135Q30KP9 77 aa14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 LINC00477Q96M19 166 aa14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 RETNQ9HD89 108 aa14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 EPDR1Q9UM22 224 aa14.16□□□□□ -0.14
UBE2E2-201ENST00000335798 NBEAL2Q6ZNJ1 2754 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms