RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 LYPD1Q8N2G4 141 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 RPUSD4Q96CM3 377 aaKnown RBP10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 Q9H3A6 140 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 SAV1Q9H4B6 383 aaPredicted RBP10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 PRELID1Q9Y255 219 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 LOC102724200A0A096LPH7 203 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 ZNF705EA8MWA4 302 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 M0R3E3 92 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 RPL35AP18077 110 aaKnown RBP10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 OTORQ9NRC9 128 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 MEGF8Q7Z7M0 2845 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 A0A0J9YX75 114 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 PGPA6NDG6 321 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 PRAC2D3DTV9 90 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 H3BMM0 161 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 IGKV3-20P01619 116 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 ZNF705DP0CH99 300 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 ZNF705BP0CI00 300 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 LINC00322Q6ZN03 302 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 TRPT1Q86TN4 253 aaKnown RBP10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 MRPL53Q96EL3 112 aaKnown RBP10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
APOBEC3B-202ENST00000335760 UBE2G2P60604 165 aa10.38□□□□□ -0.75
APOBEC3B-202ENST00000335760 TEX261Q6UWH6 196 aa10.38□□□□□ -0.75
APOBEC3B-202ENST00000335760 OR4B1Q8NGF8 309 aa10.38□□□□□ -0.75
APOBEC3B-202ENST00000335760 OR8A1Q8NGG7 326 aa10.38□□□□□ -0.75
APOBEC3B-202ENST00000335760 TEX46H3BTG2 121 aa10.37□□□□□ -0.75
APOBEC3B-202ENST00000335760 DUSP14O95147 198 aaKnown RBP10.37□□□□□ -0.75
APOBEC3B-202ENST00000335760 HBE1P02100 147 aa10.37□□□□□ -0.75
APOBEC3B-202ENST00000335760 CSN1S1P47710 185 aa10.37□□□□□ -0.75
APOBEC3B-202ENST00000335760 CNN1P51911 297 aaKnown RBP10.37□□□□□ -0.75
APOBEC3B-202ENST00000335760 CCL20P78556 96 aa10.37□□□□□ -0.75
APOBEC3B-202ENST00000335760 HIST1H1AQ02539 215 aaPredicted RBP10.37□□□□□ -0.75
APOBEC3B-202ENST00000335760 OR10J6PQ8NGY7 276 aa10.37□□□□□ -0.75
APOBEC3B-202ENST00000335760 AGRNO00468 2067 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 TRAV1-1A0A0B4J248 108 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 A0A1W2PRE2 83 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 APOC4P55056 127 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 BLOC1S1P78537 153 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 ZNF680Q8NEM1 530 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 CMTM2Q8TAZ6 248 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 RXFP4Q8TDU9 374 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 ASCL2Q99929 193 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 RPH3ALQ9UNE2 315 aa10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
APOBEC3B-202ENST00000335760 KIR2DL5BA0A0G2JN68 375 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 KIR2DL5BA0A0G2JPC4 375 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 FAM74A7A6NL05 159 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 GGTLC3B5MD39 225 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 SLC25A5P05141 298 aaKnown RBP10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 SUMO1P63165 101 aaKnown RBP10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 HAGHQ16775 308 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 MORN3Q6PF18 240 aaPredicted RBP10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 SBSPONQ8IVN8 264 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 KIR2DL5AQ8N109 375 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 KIR2DL5BQ8NHK3 375 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 B9D2Q9BPU9 175 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 CSTL1Q9H114 145 aa10.35□□□□□ -0.75
APOBEC3B-202ENST00000335760 IGKV2-40A0A087WW87 121 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 DIRC3C9JPN6 131 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 PAGE4O60829 102 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 IFNA7P01567 189 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 IGKV2D-40P01614 121 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 PPT1P50897 306 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 FXYD7P58549 80 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 GNG5P63218 68 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 ERCC8Q13216 396 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 CST9LP1Q5W188 147 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 CLUHP3Q96NS8 147 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 PPP1R14DQ9NXH3 145 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 GNG13Q9P2W3 67 aa10.34□□□□□ -0.75
APOBEC3B-202ENST00000335760 A8MTW9 85 aa10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 NPIPB6E9PJ23 425 aa10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 CA1P00915 261 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 NUTF2P61970 127 aaKnown RBP10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 ARL6IP6Q8N6S5 226 aa10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 C5orf17Q8NAS9 161 aa10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 VGLL1Q99990 258 aa10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 NKX6-2Q9C056 277 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 EPDR1Q9UM22 224 aa10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 ARL2-SNX15V9GYD0 113 aa10.33□□□□□ -0.76
APOBEC3B-202ENST00000335760 UBE2CO00762 179 aa10.32□□□□□ -0.76
APOBEC3B-202ENST00000335760 ATP5G3P48201 142 aa10.32□□□□□ -0.76
APOBEC3B-202ENST00000335760 AMTNQ6UX39 209 aa10.32□□□□□ -0.76
APOBEC3B-202ENST00000335760 GOLT1AQ6ZVE7 132 aa10.32□□□□□ -0.76
APOBEC3B-202ENST00000335760 AGPAT4-IT1Q9H0P7 198 aa10.32□□□□□ -0.76
APOBEC3B-202ENST00000335760 SLC35B3Q9H1N7 401 aa10.32□□□□□ -0.76
APOBEC3B-202ENST00000335760 MANBALQ9NQG1 85 aa10.32□□□□□ -0.76
APOBEC3B-202ENST00000335760 PRKDCP78527 4128 aaKnown RBP10.32□□□□□ -0.76
APOBEC3B-202ENST00000335760 DNAH9Q9NYC9 4486 aa10.31□□□□□ -0.76
APOBEC3B-202ENST00000335760 GIG44P09565 113 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3B-202ENST00000335760 CT45A10P0DMU9 189 aa10.31□□□□□ -0.76
APOBEC3B-202ENST00000335760 TMEM78Q5T7P6 136 aa10.31□□□□□ -0.76
APOBEC3B-202ENST00000335760 C9orf47Q6ZRZ4 202 aa10.31□□□□□ -0.76
APOBEC3B-202ENST00000335760 PCNPQ8WW12 178 aaKnown RBP10.31□□□□□ -0.76
APOBEC3B-202ENST00000335760 LINC00477Q96M19 166 aa10.31□□□□□ -0.76
APOBEC3B-202ENST00000335760 XCL2Q9UBD3 114 aa10.31□□□□□ -0.76
APOBEC3B-202ENST00000335760 RBAKDNA6NC62 111 aa10.3□□□□□ -0.76
APOBEC3B-202ENST00000335760 IFNA1P01562 189 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms