RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 LINC00052Q96N35 136 aa12.97□□□□□ -0.33
CHGA-202ENST00000334654 Q9H3A6 140 aa12.97□□□□□ -0.33
CHGA-202ENST00000334654 ZNF705FA8MVS1 300 aaPredicted RBP12.96□□□□□ -0.34
CHGA-202ENST00000334654 M0R3E3 92 aa12.96□□□□□ -0.34
CHGA-202ENST00000334654 PRB4P10163 310 aaPredicted RBP12.96□□□□□ -0.34
CHGA-202ENST00000334654 ICAM4Q14773 271 aa12.96□□□□□ -0.34
CHGA-202ENST00000334654 IQCF2Q8IXL9 164 aa12.96□□□□□ -0.34
CHGA-202ENST00000334654 PCNPQ8WW12 178 aaKnown RBP12.96□□□□□ -0.34
CHGA-202ENST00000334654 YTHDF2Q9Y5A9 579 aaKnown RBP12.96□□□□□ -0.34
CHGA-202ENST00000334654 MEGF8Q7Z7M0 2845 aa12.96□□□□□ -0.34
CHGA-202ENST00000334654 PRAC2D3DTV9 90 aa12.95□□□□□ -0.34
CHGA-202ENST00000334654 K7EIL1 84 aa12.95□□□□□ -0.34
CHGA-202ENST00000334654 TAGLN2P37802 199 aaKnown RBP12.95□□□□□ -0.34
CHGA-202ENST00000334654 CLEC5AQ9NY25 188 aa12.95□□□□□ -0.34
CHGA-202ENST00000334654 A0A1W2PRE2 83 aa12.94□□□□□ -0.34
CHGA-202ENST00000334654 PGPA6NDG6 321 aa12.94□□□□□ -0.34
CHGA-202ENST00000334654 FAM74A7A6NL05 159 aa12.94□□□□□ -0.34
CHGA-202ENST00000334654 GGTLC3B5MD39 225 aa12.94□□□□□ -0.34
CHGA-202ENST00000334654 KRBOX1C9JBD0 128 aa12.94□□□□□ -0.34
CHGA-202ENST00000334654 F6UB75 175 aa12.94□□□□□ -0.34
CHGA-202ENST00000334654 NDUFS6O75380 124 aaKnown RBP12.94□□□□□ -0.34
CHGA-202ENST00000334654 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
CHGA-202ENST00000334654 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
CHGA-202ENST00000334654 OTORQ9NRC9 128 aa12.94□□□□□ -0.34
CHGA-202ENST00000334654 KNCNA6PVL3 124 aa12.93□□□□□ -0.34
CHGA-202ENST00000334654 UBE2G2P60604 165 aa12.93□□□□□ -0.34
CHGA-202ENST00000334654 RPUSD4Q96CM3 377 aaKnown RBP12.93□□□□□ -0.34
CHGA-202ENST00000334654 SAV1Q9H4B6 383 aaPredicted RBP12.93□□□□□ -0.34
CHGA-202ENST00000334654 AAMDCQ9H7C9 122 aa12.93□□□□□ -0.34
CHGA-202ENST00000334654 PRELID1Q9Y255 219 aa12.93□□□□□ -0.34
CHGA-202ENST00000334654 A0A0J9YX75 114 aa12.92□□□□□ -0.34
CHGA-202ENST00000334654 PPT1P50897 306 aa12.92□□□□□ -0.34
CHGA-202ENST00000334654 SUMO1P63165 101 aaKnown RBP12.92□□□□□ -0.34
CHGA-202ENST00000334654 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
CHGA-202ENST00000334654 PAGE4O60829 102 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 ZNF705DP0CH99 300 aaPredicted RBP12.91□□□□□ -0.34
CHGA-202ENST00000334654 ZNF705BP0CI00 300 aaPredicted RBP12.91□□□□□ -0.34
CHGA-202ENST00000334654 IGHV4-30-4P0DP06 118 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 PEA15Q15121 130 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 FOXI2Q6ZQN5 318 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 CCDC28AQ8IWP9 274 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 FAM210AQ96ND0 272 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 ARL2-SNX15V9GYD0 113 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 A8MZ25 164 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 H3BMM0 161 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 ACTL10Q5JWF8 245 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 LINC00322Q6ZN03 302 aaPredicted RBP12.91□□□□□ -0.34
CHGA-202ENST00000334654 SRD5A3Q9H8P0 318 aa12.91□□□□□ -0.34
CHGA-202ENST00000334654 RBMY1BA6NDE4 496 aaKnown RBP12.9□□□□□ -0.34
CHGA-202ENST00000334654 RBMY1EA6NEQ0 496 aaKnown RBP12.9□□□□□ -0.34
CHGA-202ENST00000334654 A8MTW9 85 aa12.9□□□□□ -0.34
CHGA-202ENST00000334654 RBMY1DP0C7P1 496 aaKnown RBP12.9□□□□□ -0.34
CHGA-202ENST00000334654 HLA-DRB4P13762 266 aa12.9□□□□□ -0.34
CHGA-202ENST00000334654 ATP5G3P48201 142 aa12.9□□□□□ -0.34
CHGA-202ENST00000334654 ARL6IP6Q8N6S5 226 aa12.9□□□□□ -0.34
CHGA-202ENST00000334654 OR8A1Q8NGG7 326 aa12.9□□□□□ -0.34
CHGA-202ENST00000334654 GNG13Q9P2W3 67 aa12.9□□□□□ -0.34
CHGA-202ENST00000334654 HLA-DRB4X5D2U9 266 aa12.9□□□□□ -0.34
CHGA-202ENST00000334654 DIRC3C9JPN6 131 aa12.89□□□□□ -0.35
CHGA-202ENST00000334654 IFNA1P01562 189 aa12.89□□□□□ -0.35
CHGA-202ENST00000334654 GNG5P63218 68 aa12.89□□□□□ -0.35
CHGA-202ENST00000334654 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
CHGA-202ENST00000334654 SLC25A5P05141 298 aaKnown RBP12.88□□□□□ -0.35
CHGA-202ENST00000334654 C5orf17Q8NAS9 161 aa12.88□□□□□ -0.35
CHGA-202ENST00000334654 RXFP4Q8TDU9 374 aa12.88□□□□□ -0.35
CHGA-202ENST00000334654 TXNDC17Q9BRA2 123 aa12.88□□□□□ -0.35
CHGA-202ENST00000334654 NKX6-2Q9C056 277 aaPredicted RBP12.88□□□□□ -0.35
CHGA-202ENST00000334654 MANBALQ9NQG1 85 aa12.88□□□□□ -0.35
CHGA-202ENST00000334654 EPDR1Q9UM22 224 aa12.88□□□□□ -0.35
CHGA-202ENST00000334654 IGKV2-40A0A087WW87 121 aaPredicted RBP12.87□□□□□ -0.35
CHGA-202ENST00000334654 RBFOX3A6NFN3 312 aa12.87□□□□□ -0.35
CHGA-202ENST00000334654 IGKV2D-40P01614 121 aaPredicted RBP12.87□□□□□ -0.35
CHGA-202ENST00000334654 CNN1P51911 297 aaKnown RBP12.87□□□□□ -0.35
CHGA-202ENST00000334654 DEFA6Q01524 100 aa12.87□□□□□ -0.35
CHGA-202ENST00000334654 CST9LP1Q5W188 147 aa12.87□□□□□ -0.35
CHGA-202ENST00000334654 EBLN2Q6P2I7 272 aa12.87□□□□□ -0.35
CHGA-202ENST00000334654 AMTNQ6UX39 209 aa12.87□□□□□ -0.35
CHGA-202ENST00000334654 CLUHP3Q96NS8 147 aa12.87□□□□□ -0.35
CHGA-202ENST00000334654 NPIPB6E9PJ23 425 aa12.86□□□□□ -0.35
CHGA-202ENST00000334654 TCRAP04437 139 aa12.86□□□□□ -0.35
CHGA-202ENST00000334654 ERCC8Q13216 396 aa12.86□□□□□ -0.35
CHGA-202ENST00000334654 HAGHQ16775 308 aa12.86□□□□□ -0.35
CHGA-202ENST00000334654 STHQ8IWL8 128 aa12.86□□□□□ -0.35
CHGA-202ENST00000334654 CMTM2Q8TAZ6 248 aa12.86□□□□□ -0.35
CHGA-202ENST00000334654 VGLL1Q99990 258 aa12.86□□□□□ -0.35
CHGA-202ENST00000334654 EIF5A2Q9GZV4 153 aaKnown RBP12.86□□□□□ -0.35
CHGA-202ENST00000334654 AGPAT4-IT1Q9H0P7 198 aa12.86□□□□□ -0.35
CHGA-202ENST00000334654 TUBA4BQ9H853 241 aa12.86□□□□□ -0.35
CHGA-202ENST00000334654 TMEM218A2RU14 115 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 RBAKDNA6NC62 111 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 BCL2P10415 239 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 CSN1S1P47710 185 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 HIST1H1AQ02539 215 aaPredicted RBP12.85□□□□□ -0.35
CHGA-202ENST00000334654 ZNF506Q5JVG8 444 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 C9orf47Q6ZRZ4 202 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 RARRES2Q99969 163 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 FBN3Q75N90 2809 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 LOC102723971A0A1B0GUV8 181 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 C11orf94C9JXX5 98 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 DUSP14O95147 198 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms