RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ORMDL2Q53FV1 153 aa11.96□□□□□ -0.49
C9orf47-201ENST00000334490 ATP5L2Q7Z4Y8 100 aa11.96□□□□□ -0.49
C9orf47-201ENST00000334490 C8orf31Q8N9H6 132 aa11.96□□□□□ -0.49
C9orf47-201ENST00000334490 NDUFA3O95167 84 aa11.96□□□□□ -0.5
C9orf47-201ENST00000334490 NCR2O95944 276 aa11.96□□□□□ -0.5
C9orf47-201ENST00000334490 LINC00614P0C842 121 aa11.96□□□□□ -0.5
C9orf47-201ENST00000334490 ZNF876PQ49A33 203 aa11.96□□□□□ -0.5
C9orf47-201ENST00000334490 TMEM170AQ8WVE7 144 aa11.96□□□□□ -0.5
C9orf47-201ENST00000334490 COL4A4P53420 1690 aaPredicted RBP11.96□□□□□ -0.5
C9orf47-201ENST00000334490 GNB1LQ9BYB4 327 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 CENPVL3A0A0U1RRI6 287 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 HBDP02042 147 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 PRR31Q5SQ13 230 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 COL5A1-AS1Q5SY13 56 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 TNCP24821 2201 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 NAV3Q8IVL0 2385 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 RNASE1P07998 156 aaKnown RBP11.95□□□□□ -0.5
C9orf47-201ENST00000334490 POU2AF1Q16633 256 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 CHD8Q9HCK8 2581 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 A0A1B0GW64 132 aa11.95□□□□□ -0.5
C9orf47-201ENST00000334490 LBHQ53QV2 105 aaPredicted RBP11.95□□□□□ -0.5
C9orf47-201ENST00000334490 CIDEAO60543 219 aa11.94□□□□□ -0.5
C9orf47-201ENST00000334490 RPLP1P05386 114 aaKnown RBP11.94□□□□□ -0.5
C9orf47-201ENST00000334490 CD28P10747 220 aa11.94□□□□□ -0.5
C9orf47-201ENST00000334490 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
C9orf47-201ENST00000334490 MST1LQ2TV78 715 aa11.94□□□□□ -0.5
C9orf47-201ENST00000334490 C14orf178Q8N769 122 aaPredicted RBP11.94□□□□□ -0.5
C9orf47-201ENST00000334490 C1orf194Q5T5A4 169 aa11.94□□□□□ -0.5
C9orf47-201ENST00000334490 DEFB104AQ8WTQ1 72 aa11.94□□□□□ -0.5
C9orf47-201ENST00000334490 PMCHL2Q9BQD1 86 aa11.94□□□□□ -0.5
C9orf47-201ENST00000334490 DYSFO75923 2080 aa11.94□□□□□ -0.5
C9orf47-201ENST00000334490 MYO9AB2RTY4 2548 aa11.94□□□□□ -0.5
C9orf47-201ENST00000334490 ADARB2-AS1A8MUL3 147 aa11.93□□□□□ -0.5
C9orf47-201ENST00000334490 SNAI2O43623 268 aa11.93□□□□□ -0.5
C9orf47-201ENST00000334490 PET117Q6UWS5 81 aa11.93□□□□□ -0.5
C9orf47-201ENST00000334490 Q86TA4 180 aa11.93□□□□□ -0.5
C9orf47-201ENST00000334490 MSMPQ1L6U9 139 aa11.93□□□□□ -0.5
C9orf47-201ENST00000334490 TMEM95Q3KNT9 176 aa11.93□□□□□ -0.5
C9orf47-201ENST00000334490 VGLL1Q99990 258 aa11.93□□□□□ -0.5
C9orf47-201ENST00000334490 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
C9orf47-201ENST00000334490 GOLGB1Q14789 3259 aaKnown RBP11.92□□□□□ -0.5
C9orf47-201ENST00000334490 Q6ZSR3 168 aa11.92□□□□□ -0.5
C9orf47-201ENST00000334490 TMEM242Q9NWH2 141 aa11.92□□□□□ -0.5
C9orf47-201ENST00000334490 MRPL27Q9P0M9 148 aaKnown RBP11.92□□□□□ -0.5
C9orf47-201ENST00000334490 TRBV19A0A075B6N1 114 aa11.92□□□□□ -0.5
C9orf47-201ENST00000334490 IGLC1P0CG04 106 aa11.92□□□□□ -0.5
C9orf47-201ENST00000334490 FOXL1Q12952 345 aa11.92□□□□□ -0.5
C9orf47-201ENST00000334490 LY96Q9Y6Y9 160 aa11.92□□□□□ -0.5
C9orf47-201ENST00000334490 D6R8Y8 96 aa11.92□□□□□ -0.5
C9orf47-201ENST00000334490 C8orf86Q6ZUL3 223 aa11.92□□□□□ -0.5
C9orf47-201ENST00000334490 C14orf144Q96I85 54 aa11.92□□□□□ -0.5
C9orf47-201ENST00000334490 MRPS16Q9Y3D3 137 aaKnown RBP11.92□□□□□ -0.5
C9orf47-201ENST00000334490 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
C9orf47-201ENST00000334490 TTC9CQ8N5M4 171 aa11.91□□□□□ -0.5
C9orf47-201ENST00000334490 TRBV24-1A0A075B6N3 115 aa11.91□□□□□ -0.5
C9orf47-201ENST00000334490 BLCAPP62952 87 aa11.91□□□□□ -0.5
C9orf47-201ENST00000334490 MCRIP2Q9BUT9 160 aaKnown RBP11.91□□□□□ -0.5
C9orf47-201ENST00000334490 DENND4AQ7Z401 1863 aa11.91□□□□□ -0.5
C9orf47-201ENST00000334490 FABP2P12104 132 aa11.91□□□□□ -0.5
C9orf47-201ENST00000334490 NIT1Q86X76 327 aa11.91□□□□□ -0.5
C9orf47-201ENST00000334490 A0A087WWL8 130 aa11.9□□□□□ -0.5
C9orf47-201ENST00000334490 NUP35Q8NFH5 326 aa11.9□□□□□ -0.5
C9orf47-201ENST00000334490 ST6GALNAC6Q969X2 333 aa11.9□□□□□ -0.5
C9orf47-201ENST00000334490 SPTBN4Q9H254 2564 aa11.9□□□□□ -0.5
C9orf47-201ENST00000334490 IGLC7A0M8Q6 106 aa11.9□□□□□ -0.5
C9orf47-201ENST00000334490 HAPLN4Q86UW8 402 aa11.9□□□□□ -0.5
C9orf47-201ENST00000334490 AMBPP02760 352 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 H3BUA1 57 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 ANKRD11Q6UB99 2663 aaPredicted RBP11.89□□□□□ -0.51
C9orf47-201ENST00000334490 KNCNA6PVL3 124 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 ZFP36P26651 326 aaKnown RBP11.89□□□□□ -0.51
C9orf47-201ENST00000334490 DDTP30046 118 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 TSSC4Q9Y5U2 329 aaPredicted RBP11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST1H2BKO60814 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST1H2BJP06899 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST1H2BOP23527 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST1H2BBP33778 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST1H2BDP58876 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST1H2BCP62807 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST2H2BEQ16778 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST1H2BHQ93079 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST1H2BNQ99877 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 HIST1H2BMQ99879 126 aa11.89□□□□□ -0.51
C9orf47-201ENST00000334490 IGHV7-4-1A0A0J9YVY3 117 aa11.88□□□□□ -0.51
C9orf47-201ENST00000334490 C19orf84I3L1E1 186 aa11.88□□□□□ -0.51
C9orf47-201ENST00000334490 CXCL1P09341 107 aa11.88□□□□□ -0.51
C9orf47-201ENST00000334490 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
C9orf47-201ENST00000334490 FNDC4Q9H6D8 234 aaPredicted RBP11.88□□□□□ -0.51
C9orf47-201ENST00000334490 GAGE10A6NGK3 116 aa11.88□□□□□ -0.51
C9orf47-201ENST00000334490 DEFB136Q30KP8 78 aa11.88□□□□□ -0.51
C9orf47-201ENST00000334490 H3BRN7 92 aa11.88□□□□□ -0.51
C9orf47-201ENST00000334490 KLK9Q9UKQ9 250 aa11.88□□□□□ -0.51
C9orf47-201ENST00000334490 LAGE3Q14657 143 aa11.88□□□□□ -0.51
C9orf47-201ENST00000334490 HOXD3P31249 432 aaPredicted RBP11.87□□□□□ -0.51
C9orf47-201ENST00000334490 TMEM131Q92545 1883 aa11.87□□□□□ -0.51
C9orf47-201ENST00000334490 VCYO14598 125 aa11.87□□□□□ -0.51
C9orf47-201ENST00000334490 LINC00469Q8N7U9 141 aa11.87□□□□□ -0.51
C9orf47-201ENST00000334490 SLC25A2Q9BXI2 301 aa11.87□□□□□ -0.51
C9orf47-201ENST00000334490 IGHV7-81A0A0B4J1V7 117 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms