RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 IGKV3-20P01619 116 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV3-48P01763 117 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 CEACAM8P31997 349 aaPredicted RBP4.46□□□□□ -1.7
PTPRB-202ENST00000334414 Q8TCH9 128 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 IGKV1-27A0A075B6S5 117 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 C22orf46C9J442 243 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 GATA3P23771 443 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 PLXNA2O75051 1894 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 H3BUA1 57 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 CTSBP07858 339 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 C20orf204Q6ZNR8 217 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 PIKFYVEQ9Y2I7 2098 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 PRR25Q96S07 402 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 THBDP07204 575 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 CFHR2P36980 270 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 NDUFV3P56181 108 aaKnown RBP4.46□□□□□ -1.7
PTPRB-202ENST00000334414 C10orf105Q8TEF2 133 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 C1orf159Q96HA4 380 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 ZNF747Q9BV97 191 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 MRPL35Q9NZE8 188 aaKnown RBP4.46□□□□□ -1.7
PTPRB-202ENST00000334414 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.46□□□□□ -1.7
PTPRB-202ENST00000334414 ZFP36L1Q07352 338 aaKnown RBP4.46□□□□□ -1.7
PTPRB-202ENST00000334414 SH2D6Q7Z4S9 175 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 CFHR4Q92496 578 aa4.46□□□□□ -1.7
PTPRB-202ENST00000334414 PLXNA4Q9HCM2 1894 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 NDUFS7O75251 213 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 VMO1Q7Z5L0 202 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 C11orf86A6NJI1 115 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 SIGLEC9Q9Y336 463 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 FAM240AA0A1B0GVK7 77 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 WFDC9Q8NEX5 89 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 IGKV1D-8A0A087WSZ0 117 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 CR1LQ2VPA4 569 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 PAX9P55771 341 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 ZNF71Q9NQZ8 489 aaPredicted RBP4.45□□□□□ -1.7
PTPRB-202ENST00000334414 LINC00527Q9UJ94 153 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 LINC00473A8K010 186 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV1-69P01742 117 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 BAALC-AS2P0C853 105 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV1-18A0A0C4DH31 117 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 LINC00643Q86TS7 51 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 NTN5Q8WTR8 489 aaPredicted RBP4.45□□□□□ -1.7
PTPRB-202ENST00000334414 PRR15LQ9BU68 103 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV3OR16-13A0A075B7E8 117 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV3-74A0A0B4J1X5 117 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 MED14OSP0DP75 135 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 TMEM200BQ69YZ2 307 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 SPATA12Q7Z6I5 190 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 K7ERJ3 54 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 LMO1P25800 156 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 Q6P435 159 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 MUSTN1Q8IVN3 82 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 SLC25A45Q8N413 288 aa4.45□□□□□ -1.7
PTPRB-202ENST00000334414 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 ITGBL1O95965 494 aaPredicted RBP4.44□□□□□ -1.7
PTPRB-202ENST00000334414 SPACA3Q8IXA5 215 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 CD177Q8N6Q3 437 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 NDUFC2-KCTD14E9PQ53 114 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 C3orf22Q8N5N4 141 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 CD59P13987 128 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 LINC00311Q8N616 119 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 TRPM7Q96QT4 1865 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 RNASE6Q93091 150 aaKnown RBP4.44□□□□□ -1.7
PTPRB-202ENST00000334414 C20orf173Q96LM9 149 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 MORN5Q5VZ52 161 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 TMEM256-PLSCR3K7ERE1 68 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 C5orf63A6NC05 138 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 NDUFB1O75438 58 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
PTPRB-202ENST00000334414 E9PLN8 166 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 CELA2AP08217 269 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV1OR15-1A0A075B7D0 117 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 Q6ZUT4 128 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 C7orf69Q9H7B7 122 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 SEC61GP60059 68 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 CYYR1Q96J86 154 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 PRSS57Q6UWY2 283 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 Q6ZS92 163 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 SCN10AQ9Y5Y9 1956 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 TRBV6-1A0A0K0K1D8 114 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 TMEM178BH3BS89 294 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 NDUFA4O00483 81 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 RFPL3SP0C7P2 107 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 ZNF726P1Q15940 193 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 LRRC75A-AS1Q8N1F1 130 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 Q8TAT8 98 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 IGKV1-12A0A0C4DH73 117 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 IGKV1D-12P01611 117 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV1-46P01743 117 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 C8orf49Q96NF6 230 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 GAFA1Q96PS6 74 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 GREB1Q4ZG55 1949 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 CELA3BP08861 270 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 TOMM6Q96B49 74 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 GGNQ86UU5 652 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 ZC2HC1AQ96GY0 325 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 PPIFP30405 207 aaKnown RBP4.43□□□□□ -1.7
PTPRB-202ENST00000334414 FXYD5Q96DB9 178 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms