RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 PSG9Q00887 426 aa14.93□□□□□ -0.02
LAMP1-201ENST00000332556 CST9LQ9H4G1 147 aa14.93□□□□□ -0.02
LAMP1-201ENST00000332556 SOX21Q9Y651 276 aaPredicted RBP14.93□□□□□ -0.02
LAMP1-201ENST00000332556 TRAV8-6A0A0B4J262 113 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 FXYD7P58549 80 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 RHOGP84095 191 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 GNG7O60262 68 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 C5orf64Q2M2E5 130 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 PET117Q6UWS5 81 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 ZNF491Q8N8L2 437 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 OR11H6Q8NGC7 330 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 FANCD2OSQ96PS1 177 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 VPS25Q9BRG1 176 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 GFRA4Q9GZZ7 299 aa14.92□□□□□ -0.02
LAMP1-201ENST00000332556 OVOL3O00110 214 aa14.91□□□□□ -0.02
LAMP1-201ENST00000332556 HLA-DRB1P01911 266 aa14.91□□□□□ -0.02
LAMP1-201ENST00000332556 C12orf54Q6X4T0 127 aa14.91□□□□□ -0.02
LAMP1-201ENST00000332556 IGHV3OR16-13A0A075B7E8 117 aa14.91□□□□□ -0.02
LAMP1-201ENST00000332556 IGHV3-74A0A0B4J1X5 117 aa14.91□□□□□ -0.02
LAMP1-201ENST00000332556 LOC389332A0A1B0GUA5 103 aa14.91□□□□□ -0.02
LAMP1-201ENST00000332556 RNF125Q96EQ8 232 aa14.91□□□□□ -0.02
LAMP1-201ENST00000332556 HSPB8Q9UJY1 196 aa14.91□□□□□ -0.02
LAMP1-201ENST00000332556 TMSB15BA0A087X1C1 80 aa14.9□□□□□ -0.02
LAMP1-201ENST00000332556 NPIPB6E9PJ23 425 aa14.9□□□□□ -0.02
LAMP1-201ENST00000332556 HAX1O00165 279 aa14.9□□□□□ -0.02
LAMP1-201ENST00000332556 LOXL1Q08397 574 aaPredicted RBP14.9□□□□□ -0.02
LAMP1-201ENST00000332556 COTL1Q14019 142 aa14.9□□□□□ -0.02
LAMP1-201ENST00000332556 AP5S1Q9NUS5 200 aa14.9□□□□□ -0.02
LAMP1-201ENST00000332556 LINC01548A6NM66 108 aa14.9□□□□□ -0.02
LAMP1-201ENST00000332556 HOXB4P17483 251 aaPredicted RBP14.9□□□□□ -0.02
LAMP1-201ENST00000332556 PRTN3P24158 256 aa14.9□□□□□ -0.02
LAMP1-201ENST00000332556 GPR183P32249 361 aa14.9□□□□□ -0.02
LAMP1-201ENST00000332556 IGHV3-66A0A0C4DH42 116 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 A0A1B0GUT8 65 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 HLA-DMBP28068 263 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 OCIAD2Q56VL3 154 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 C2orf91Q6ZV80 131 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 C8orf49Q96NF6 230 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 ODF3BA8MYP8 253 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 OR8A1Q8NGG7 326 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 PRSS3P2Q8NHM4 247 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 ARPC1AQ92747 370 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 NAA38Q9BRA0 125 aaKnown RBP14.89□□□□□ -0.03
LAMP1-201ENST00000332556 OTORQ9NRC9 128 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 PIEZO1Q92508 2521 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 HIST1H1AQ02539 215 aaPredicted RBP14.89□□□□□ -0.03
LAMP1-201ENST00000332556 ECSCRQ19T08 205 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 LINC01545Q5VT33 79 aa14.89□□□□□ -0.03
LAMP1-201ENST00000332556 F8W735 103 aaPredicted RBP14.88□□□□□ -0.03
LAMP1-201ENST00000332556 S100A7P31151 101 aa14.88□□□□□ -0.03
LAMP1-201ENST00000332556 ZNF747Q9BV97 191 aa14.88□□□□□ -0.03
LAMP1-201ENST00000332556 BPESC1Q9GZL8 116 aa14.88□□□□□ -0.03
LAMP1-201ENST00000332556 LINC00527Q9UJ94 153 aa14.88□□□□□ -0.03
LAMP1-201ENST00000332556 TMEM11P17152 192 aa14.88□□□□□ -0.03
LAMP1-201ENST00000332556 IFI27P40305 119 aaPredicted RBP14.88□□□□□ -0.03
LAMP1-201ENST00000332556 PLP1P60201 277 aa14.88□□□□□ -0.03
LAMP1-201ENST00000332556 ZFYVE26Q68DK2 2539 aa14.87□□□□□ -0.03
LAMP1-201ENST00000332556 TRBV19A0A075B6N1 114 aa14.87□□□□□ -0.03
LAMP1-201ENST00000332556 IGHV3-49A0A0A0MS15 119 aa14.87□□□□□ -0.03
LAMP1-201ENST00000332556 SERTM2A0A1B0GWG4 89 aa14.87□□□□□ -0.03
LAMP1-201ENST00000332556 CEACAM3P40198 252 aa14.87□□□□□ -0.03
LAMP1-201ENST00000332556 FA2HQ7L5A8 372 aa14.87□□□□□ -0.03
LAMP1-201ENST00000332556 SHANK2-AS3Q9BTD1 123 aa14.87□□□□□ -0.03
LAMP1-201ENST00000332556 UCNP55089 124 aa14.87□□□□□ -0.03
LAMP1-201ENST00000332556 C7orf71A4D174 169 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 NDUFA3O95167 84 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 GNLYP22749 145 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 CRIP1P50238 77 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 BPIFA4PQ86YQ2 179 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 GAGE12BA1L429 117 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 FAM231BA6NCW3 169 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 H3BRN7 92 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 CD5LO43866 347 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 COX8AP10176 69 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 SIGLEC15Q6ZMC9 328 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 MS4A6AQ9H2W1 248 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 ABCA2Q9BZC7 2435 aa14.86□□□□□ -0.03
LAMP1-201ENST00000332556 IGKV2-40A0A087WW87 121 aaPredicted RBP14.85□□□□□ -0.03
LAMP1-201ENST00000332556 IGKV2D-40P01614 121 aaPredicted RBP14.85□□□□□ -0.03
LAMP1-201ENST00000332556 NPBQ8NG41 125 aa14.85□□□□□ -0.03
LAMP1-201ENST00000332556 G3V318 75 aa14.85□□□□□ -0.03
LAMP1-201ENST00000332556 TMEM219Q86XT9 240 aa14.85□□□□□ -0.03
LAMP1-201ENST00000332556 Q8TAT8 98 aa14.85□□□□□ -0.03
LAMP1-201ENST00000332556 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.84□□□□□ -0.038e-6■■■■□ 21.9
LAMP1-201ENST00000332556 IGLV11-55A0A075B6I3 123 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 TMEM213A2RRL7 107 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 EGR2P11161 476 aaPredicted RBP14.84□□□□□ -0.03
LAMP1-201ENST00000332556 RIGQ13278 110 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 POLQO75417 2590 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 A0A096LNJ9 63 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 IGHV7-81A0A0B4J1V7 117 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 M0R1W7 72 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 PIP4P2Q8N4L2 257 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 ZNF414Q96IQ9 312 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 PSG8Q9UQ74 426 aa14.84□□□□□ -0.03
LAMP1-201ENST00000332556 USP9XQ93008 2570 aaPredicted RBP14.84□□□□□ -0.03
LAMP1-201ENST00000332556 D6R8Y8 96 aa14.83□□□□□ -0.03
LAMP1-201ENST00000332556 ZNF207O43670 478 aaKnown RBP14.83□□□□□ -0.03
LAMP1-201ENST00000332556 C16orf54Q6UWD8 224 aa14.83□□□□□ -0.03
LAMP1-201ENST00000332556 OR10AG1Q8NH19 301 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms