RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 COX8AP10176 69 aa17.59■□□□□ 0.41
HOXD1-201ENST00000331462 VMO1Q7Z5L0 202 aa17.59■□□□□ 0.41
HOXD1-201ENST00000331462 DEFB125Q8N687 156 aa17.59■□□□□ 0.41
HOXD1-201ENST00000331462 SIGLEC8Q9NYZ4 499 aa17.59■□□□□ 0.41
HOXD1-201ENST00000331462 TMEM213A2RRL7 107 aa17.58■□□□□ 0.4
HOXD1-201ENST00000331462 IFI27P40305 119 aaPredicted RBP17.58■□□□□ 0.4
HOXD1-201ENST00000331462 PRELID3AQ96N28 172 aa17.58■□□□□ 0.4
HOXD1-201ENST00000331462 PIEZO1Q92508 2521 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 IGKV2-40A0A087WW87 121 aaPredicted RBP17.57■□□□□ 0.4
HOXD1-201ENST00000331462 IGKV2D-40P01614 121 aaPredicted RBP17.57■□□□□ 0.4
HOXD1-201ENST00000331462 CTSGP08311 255 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 S100A7P31151 101 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 DYNAPQ8N1N2 210 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 MCRIP2Q9BUT9 160 aaKnown RBP17.57■□□□□ 0.4
HOXD1-201ENST00000331462 RABAC1Q9UI14 185 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 TAX1BP3O14907 124 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 FOXC1Q12948 553 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 KLK9Q2XQG4 91 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 AMN1Q8IY45 258 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 KLK9Q9UKQ9 250 aa17.57■□□□□ 0.4
HOXD1-201ENST00000331462 IGLC6P0CF74 106 aa17.56■□□□□ 0.4
HOXD1-201ENST00000331462 PRB4P10163 310 aaPredicted RBP17.56■□□□□ 0.4
HOXD1-201ENST00000331462 EGR2P11161 476 aaPredicted RBP17.56■□□□□ 0.4
HOXD1-201ENST00000331462 BMI1P35226 326 aa17.56■□□□□ 0.4
HOXD1-201ENST00000331462 PAX8Q06710 450 aa17.56■□□□□ 0.4
HOXD1-201ENST00000331462 SMAD5-AS1Q9Y6J3 95 aa17.56■□□□□ 0.4
HOXD1-201ENST00000331462 NCBP2LA6PVI3 153 aaKnown RBP17.55■□□□□ 0.4
HOXD1-201ENST00000331462 H0Y8G0 127 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 K7EP13 123 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 CCL21O00585 134 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 NCR2O95944 276 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 IGHG4P01861 327 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 MRPL51Q4U2R6 128 aaKnown RBP17.55■□□□□ 0.4
HOXD1-201ENST00000331462 NPFFR1Q9GZQ6 430 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 OR2T8A6NH00 312 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 FAM106CPP0CH98 169 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 RHOGP84095 191 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 LOXL1Q08397 574 aaPredicted RBP17.55■□□□□ 0.4
HOXD1-201ENST00000331462 LGALS9BQ3B8N2 356 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 FAM106AQ4KMX7 169 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 LGALS9CQ6DKI2 356 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 PSMG3-AS1Q96PY0 264 aa17.55■□□□□ 0.4
HOXD1-201ENST00000331462 DCHS1Q96JQ0 3298 aa17.54■□□□□ 0.4
HOXD1-201ENST00000331462 TLN1Q9Y490 2541 aaKnown RBP17.54■□□□□ 0.4
HOXD1-201ENST00000331462 TMSB15BA0A087X1C1 80 aa17.54■□□□□ 0.4
HOXD1-201ENST00000331462 A0A1W2PRD5 423 aa17.54■□□□□ 0.4
HOXD1-201ENST00000331462 A0A1W2PRF3 423 aa17.54■□□□□ 0.4
HOXD1-201ENST00000331462 A0A1W2PRM7 423 aa17.54■□□□□ 0.4
HOXD1-201ENST00000331462 CNFNQ9BYD5 112 aa17.54■□□□□ 0.4
HOXD1-201ENST00000331462 IGHV7-81A0A0B4J1V7 117 aa17.53■□□□□ 0.4
HOXD1-201ENST00000331462 C2orf91Q6ZV80 131 aa17.53■□□□□ 0.4
HOXD1-201ENST00000331462 FER1L6-AS1Q8NA97 138 aa17.53■□□□□ 0.4
HOXD1-201ENST00000331462 MUC21A0A0G2JKD1 596 aa17.53■□□□□ 0.4
HOXD1-201ENST00000331462 MUC21A0A140T8X8 626 aa17.53■□□□□ 0.4
HOXD1-201ENST00000331462 TMEM11P17152 192 aa17.53■□□□□ 0.4
HOXD1-201ENST00000331462 ADORA2A-AS1P86434 159 aa17.53■□□□□ 0.4
HOXD1-201ENST00000331462 CDSNQ15517 529 aa17.53■□□□□ 0.4
HOXD1-201ENST00000331462 MUC21Q5SSG8 566 aa17.53■□□□□ 0.4
HOXD1-201ENST00000331462 A0A087X0K7 114 aa17.52■□□□□ 0.4
HOXD1-201ENST00000331462 HBDP02042 147 aa17.52■□□□□ 0.4
HOXD1-201ENST00000331462 GPR183P32249 361 aa17.52■□□□□ 0.4
HOXD1-201ENST00000331462 ZNF80P51504 273 aaPredicted RBP17.52■□□□□ 0.4
HOXD1-201ENST00000331462 ZNF575Q86XF7 245 aa17.52■□□□□ 0.4
HOXD1-201ENST00000331462 PIP4P2Q8N4L2 257 aa17.52■□□□□ 0.4
HOXD1-201ENST00000331462 OR1N2Q8NGR9 330 aa17.52■□□□□ 0.4
HOXD1-201ENST00000331462 TIMM8BQ9Y5J9 83 aaPredicted RBP17.52■□□□□ 0.4
HOXD1-201ENST00000331462 TPRP12270 2363 aaKnown RBP17.52■□□□□ 0.4
HOXD1-201ENST00000331462 CD5LO43866 347 aa17.51■□□□□ 0.39
HOXD1-201ENST00000331462 IGHV3-23P01764 117 aa17.51■□□□□ 0.39
HOXD1-201ENST00000331462 VGLL1Q99990 258 aa17.51■□□□□ 0.39
HOXD1-201ENST00000331462 FGF6P10767 208 aa17.51■□□□□ 0.39
HOXD1-201ENST00000331462 Q8N9W7 124 aa17.51■□□□□ 0.39
HOXD1-201ENST00000331462 Q8TAT8 98 aa17.51■□□□□ 0.39
HOXD1-201ENST00000331462 FAM110DQ8TAY7 271 aaPredicted RBP17.51■□□□□ 0.39
HOXD1-201ENST00000331462 MSRB2Q9Y3D2 182 aa17.51■□□□□ 0.39
HOXD1-201ENST00000331462 LOC389332A0A1B0GUA5 103 aa17.5■□□□□ 0.39
HOXD1-201ENST00000331462 RAB9AP51151 201 aa17.5■□□□□ 0.39
HOXD1-201ENST00000331462 DTX2Q86UW9 622 aa17.5■□□□□ 0.39
HOXD1-201ENST00000331462 SIRPDQ9H106 197 aa17.5■□□□□ 0.39
HOXD1-201ENST00000331462 LINC01546A6NGU7 62 aa17.49■□□□□ 0.39
HOXD1-201ENST00000331462 ZNF502Q8TBZ5 544 aa17.49■□□□□ 0.39
HOXD1-201ENST00000331462 ARHGAP32A7KAX9 2087 aa17.49■□□□□ 0.39
HOXD1-201ENST00000331462 VAMP3Q15836 100 aa17.49■□□□□ 0.39
HOXD1-201ENST00000331462 OR8A1Q8NGG7 326 aa17.49■□□□□ 0.39
HOXD1-201ENST00000331462 RBAKDNA6NC62 111 aa17.48■□□□□ 0.39
HOXD1-201ENST00000331462 NPYP01303 97 aa17.48■□□□□ 0.39
HOXD1-201ENST00000331462 CKS2P33552 79 aa17.48■□□□□ 0.39
HOXD1-201ENST00000331462 ZFAND3Q9H8U3 227 aa17.48■□□□□ 0.39
HOXD1-201ENST00000331462 PTPRQQ9UMZ3 2332 aa17.48■□□□□ 0.39
HOXD1-201ENST00000331462 PPBPP02775 128 aa17.48■□□□□ 0.39
HOXD1-201ENST00000331462 TWIST1Q15672 202 aa17.48■□□□□ 0.39
HOXD1-201ENST00000331462 OR4C5Q8NGB2 326 aa17.48■□□□□ 0.39
HOXD1-201ENST00000331462 ZFP36P26651 326 aaKnown RBP17.47■□□□□ 0.39
HOXD1-201ENST00000331462 LINC01559Q495D7 138 aa17.47■□□□□ 0.39
HOXD1-201ENST00000331462 ANKRD39Q53RE8 183 aa17.47■□□□□ 0.39
HOXD1-201ENST00000331462 HLA-DMBP28068 263 aa17.46■□□□□ 0.39
HOXD1-201ENST00000331462 SEC11AP67812 179 aa17.46■□□□□ 0.39
HOXD1-201ENST00000331462 RNASE8Q8TDE3 154 aaKnown RBP17.46■□□□□ 0.39
HOXD1-201ENST00000331462 FABP5P3A8MUU1 101 aa17.46■□□□□ 0.39
HOXD1-201ENST00000331462 RNF185Q96GF1 192 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms