RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TMEM14CQ9P0S9 112 aa19.82■□□□□ 0.76
ATPAF1-201ENST00000329231 IGLL5B9A064 214 aa19.81■□□□□ 0.76
ATPAF1-201ENST00000329231 CRXO43186 299 aaPredicted RBP19.81■□□□□ 0.76
ATPAF1-201ENST00000329231 ZNF253O75346 499 aa19.81■□□□□ 0.76
ATPAF1-201ENST00000329231 GCSAMLQ5JQS6 135 aa19.81■□□□□ 0.76
ATPAF1-201ENST00000329231 ZNF586Q9NXT0 402 aa19.81■□□□□ 0.76
ATPAF1-201ENST00000329231 TEX48A0A1B0GUV7 120 aa19.8■□□□□ 0.76
ATPAF1-201ENST00000329231 LOC102723971A0A1B0GUV8 181 aa19.8■□□□□ 0.76
ATPAF1-201ENST00000329231 OR10J6PQ8NGY7 276 aa19.8■□□□□ 0.76
ATPAF1-201ENST00000329231 PRB4P10163 310 aaPredicted RBP19.79■□□□□ 0.76
ATPAF1-201ENST00000329231 ZNF767PQ75MW2 155 aa19.79■□□□□ 0.76
ATPAF1-201ENST00000329231 BAP18Q8IXM2 172 aa19.79■□□□□ 0.76
ATPAF1-201ENST00000329231 TRAV12-2A0A075B6T6 113 aa19.78■□□□□ 0.76
ATPAF1-201ENST00000329231 HIST1H1EP10412 219 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-201ENST00000329231 LGALS9CQ6DKI2 356 aa19.78■□□□□ 0.76
ATPAF1-201ENST00000329231 INO80EQ8NBZ0 244 aaPredicted RBP19.78■□□□□ 0.76
ATPAF1-201ENST00000329231 TRBV19A0A075B6N1 114 aa19.77■□□□□ 0.76
ATPAF1-201ENST00000329231 FXYD6-FXYD2A0A087WZ82 144 aa19.77■□□□□ 0.76
ATPAF1-201ENST00000329231 DEFB131BA0A096LNP1 70 aa19.77■□□□□ 0.76
ATPAF1-201ENST00000329231 DKK2Q9UBU2 259 aa19.77■□□□□ 0.76
ATPAF1-201ENST00000329231 CDKN1BP46527 198 aa19.76■□□□□ 0.75
ATPAF1-201ENST00000329231 PDE6HQ13956 83 aa19.76■□□□□ 0.75
ATPAF1-201ENST00000329231 ZNF266Q14584 549 aa19.76■□□□□ 0.75
ATPAF1-201ENST00000329231 FFAR4Q5NUL3 377 aa19.76■□□□□ 0.75
ATPAF1-201ENST00000329231 FAM222AQ5U5X8 452 aa19.76■□□□□ 0.75
ATPAF1-201ENST00000329231 MRPL32Q9BYC8 188 aaKnown RBP19.76■□□□□ 0.75
ATPAF1-201ENST00000329231 TNFSF18Q9UNG2 199 aa19.76■□□□□ 0.75
ATPAF1-201ENST00000329231 TIMM9Q9Y5J7 89 aa19.76■□□□□ 0.75
ATPAF1-201ENST00000329231 PRAC2D3DTV9 90 aa19.75■□□□□ 0.75
ATPAF1-201ENST00000329231 G3V3Q6 166 aa19.75■□□□□ 0.75
ATPAF1-201ENST00000329231 PYYP10082 97 aa19.75■□□□□ 0.75
ATPAF1-201ENST00000329231 TMEM256Q8N2U0 113 aa19.75■□□□□ 0.75
ATPAF1-201ENST00000329231 MRPL53Q96EL3 112 aaKnown RBP19.75■□□□□ 0.75
ATPAF1-201ENST00000329231 SLC25A2Q9BXI2 301 aa19.75■□□□□ 0.75
ATPAF1-201ENST00000329231 APLNQ9ULZ1 77 aa19.75■□□□□ 0.75
ATPAF1-201ENST00000329231 YTHDF2Q9Y5A9 579 aaKnown RBP19.75■□□□□ 0.75
ATPAF1-201ENST00000329231 HYDINQ4G0P3 5121 aa19.74■□□□□ 0.75
ATPAF1-201ENST00000329231 TSPOP30536 169 aa19.74■□□□□ 0.75
ATPAF1-201ENST00000329231 MIR17HGQ75NE6 70 aa19.74■□□□□ 0.75
ATPAF1-201ENST00000329231 RNF222A6NCQ9 220 aa19.73■□□□□ 0.75
ATPAF1-201ENST00000329231 ZNF705GA8MUZ8 300 aaPredicted RBP19.73■□□□□ 0.75
ATPAF1-201ENST00000329231 RPP25LQ8N5L8 163 aaKnown RBP19.73■□□□□ 0.75
ATPAF1-201ENST00000329231 BLNKQ8WV28 456 aa19.73■□□□□ 0.75
ATPAF1-201ENST00000329231 FAM167A-AS1Q96KT0 104 aa19.73■□□□□ 0.75
ATPAF1-201ENST00000329231 LINC01587Q99440 93 aa19.73■□□□□ 0.75
ATPAF1-201ENST00000329231 NIPSNAP3BQ9BS92 247 aa19.73■□□□□ 0.75
ATPAF1-201ENST00000329231 FUT9Q9Y231 359 aa19.73■□□□□ 0.75
ATPAF1-201ENST00000329231 PRELID1Q9Y255 219 aa19.73■□□□□ 0.75
ATPAF1-201ENST00000329231 IGHV4-4A0A075B6R2 117 aa19.72■□□□□ 0.75
ATPAF1-201ENST00000329231 NDUFB4O95168 129 aa19.72■□□□□ 0.75
ATPAF1-201ENST00000329231 OR51M1Q9H341 326 aa19.71■□□□□ 0.75
ATPAF1-201ENST00000329231 AAMDCQ9H7C9 122 aa19.71■□□□□ 0.75
ATPAF1-201ENST00000329231 TAS2R60P59551 318 aa19.7■□□□□ 0.74
ATPAF1-201ENST00000329231 C20orf144Q9BQM9 153 aa19.7■□□□□ 0.74
ATPAF1-201ENST00000329231 NPIPB6E9PJ23 425 aa19.69■□□□□ 0.74
ATPAF1-201ENST00000329231 M0R3E3 92 aa19.69■□□□□ 0.74
ATPAF1-201ENST00000329231 PRM2P04554 102 aa19.69■□□□□ 0.74
ATPAF1-201ENST00000329231 NBEAP1P0C6P0 100 aa19.69■□□□□ 0.74
ATPAF1-201ENST00000329231 HSD17B11Q8NBQ5 300 aa19.69■□□□□ 0.74
ATPAF1-201ENST00000329231 ODF3Q96PU9 254 aa19.69■□□□□ 0.74
ATPAF1-201ENST00000329231 PAXXQ9BUH6 204 aa19.69■□□□□ 0.74
ATPAF1-201ENST00000329231 SMLR1H3BR10 107 aa19.68■□□□□ 0.74
ATPAF1-201ENST00000329231 LEPP41159 167 aa19.68■□□□□ 0.74
ATPAF1-201ENST00000329231 ACOT6Q3I5F7 207 aaPredicted RBP19.68■□□□□ 0.74
ATPAF1-201ENST00000329231 H7BYZ3 331 aa19.67■□□□□ 0.74
ATPAF1-201ENST00000329231 ARPC5O15511 151 aa19.67■□□□□ 0.74
ATPAF1-201ENST00000329231 CT45A10P0DMU9 189 aa19.67■□□□□ 0.74
ATPAF1-201ENST00000329231 DAD1P61803 113 aa19.67■□□□□ 0.74
ATPAF1-201ENST00000329231 EXOC3-AS1Q8N2X6 119 aa19.67■□□□□ 0.74
ATPAF1-201ENST00000329231 PSMG3Q9BT73 122 aaPredicted RBP19.67■□□□□ 0.74
ATPAF1-201ENST00000329231 PLA2G2EQ9NZK7 142 aa19.67■□□□□ 0.74
ATPAF1-201ENST00000329231 LYRM9A8MSI8 78 aa19.66■□□□□ 0.74
ATPAF1-201ENST00000329231 OR7C2O60412 319 aa19.66■□□□□ 0.74
ATPAF1-201ENST00000329231 HTN1P15515 57 aa19.66■□□□□ 0.74
ATPAF1-201ENST00000329231 AZU1P20160 251 aa19.66■□□□□ 0.74
ATPAF1-201ENST00000329231 M6PRP20645 277 aa19.66■□□□□ 0.74
ATPAF1-201ENST00000329231 OR2G3Q8NGZ4 309 aa19.66■□□□□ 0.74
ATPAF1-201ENST00000329231 RNF141Q8WVD5 230 aa19.66■□□□□ 0.74
ATPAF1-201ENST00000329231 FXYD5Q96DB9 178 aa19.66■□□□□ 0.74
ATPAF1-201ENST00000329231 NDUFAF3Q9BU61 184 aa19.66■□□□□ 0.74
ATPAF1-201ENST00000329231 BORCS7-ASMTA0A0B4J1R7 106 aa19.65■□□□□ 0.74
ATPAF1-201ENST00000329231 OR10J4P0C629 311 aa19.65■□□□□ 0.74
ATPAF1-201ENST00000329231 ATP6V0CP27449 155 aa19.65■□□□□ 0.74
ATPAF1-201ENST00000329231 ICAM4Q14773 271 aa19.65■□□□□ 0.74
ATPAF1-201ENST00000329231 KIR3DS1Q14943 382 aa19.65■□□□□ 0.74
ATPAF1-201ENST00000329231 GFI1BQ5VTD9 330 aa19.65■□□□□ 0.74
ATPAF1-201ENST00000329231 C16orf74Q96GX8 76 aa19.65■□□□□ 0.74
ATPAF1-201ENST00000329231 TAS2R45P59539 299 aa19.64■□□□□ 0.73
ATPAF1-201ENST00000329231 KHDC3LQ587J8 217 aa19.64■□□□□ 0.73
ATPAF1-201ENST00000329231 RPL7L1Q6DKI1 246 aaKnown RBP19.64■□□□□ 0.73
ATPAF1-201ENST00000329231 Q6ZNX1 250 aa19.64■□□□□ 0.73
ATPAF1-201ENST00000329231 FAM210BQ96KR6 192 aa19.64■□□□□ 0.73
ATPAF1-201ENST00000329231 LINC00477Q96M19 166 aa19.64■□□□□ 0.73
ATPAF1-201ENST00000329231 TAAR5O14804 337 aa19.63■□□□□ 0.73
ATPAF1-201ENST00000329231 RAB2AP61019 212 aa19.63■□□□□ 0.73
ATPAF1-201ENST00000329231 ZNF493Q6ZR52 646 aa19.63■□□□□ 0.73
ATPAF1-201ENST00000329231 PLAC8L1A1L4L8 177 aa19.62■□□□□ 0.73
ATPAF1-201ENST00000329231 J3KRW8 73 aa19.62■□□□□ 0.73
ATPAF1-201ENST00000329231 HTN3P15516 51 aa19.62■□□□□ 0.73
ATPAF1-201ENST00000329231 SERF2P84101 59 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms