RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 DNASE2O00115 360 aaPredicted RBP7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 HLA-DMBP28068 263 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 ID1P41134 155 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 RIPPLY3P57055 190 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 PSG3Q16557 428 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 RNF182Q8N6D2 247 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 ATG101Q9BSB4 218 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 M0R3E3 92 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 TCRAP04437 139 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 CSN1S1P47710 185 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 IGFL4Q6B9Z1 124 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 SPATA3Q8NHX4 192 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 C2CD4CQ8TF44 421 aa7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 RPUSD4Q96CM3 377 aaKnown RBP7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 SPAG8Q99932 426 aaPredicted RBP7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 MCRIP2Q9BUT9 160 aaKnown RBP7.69□□□□□ -1.18
VIPAS39-201ENST00000327028 CD33P20138 364 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 TFPI2P48307 235 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 INSL3P51460 131 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 CEBPGP53567 150 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 C9orf66Q5T8R8 295 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 WFDC3Q8IUB2 231 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 WFDC9Q8NEX5 89 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 C20orf173Q96LM9 149 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 RPH3ALQ9UNE2 315 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 SERTM2A0A1B0GWG4 89 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 AKR1C3P42330 323 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 ANK2Q01484 3957 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 LCN12Q6JVE5 192 aa7.68□□□□□ -1.18
VIPAS39-201ENST00000327028 IZUMO1RA6ND01 250 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 OR4C46A6NHA9 309 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 PCP4L1A6NKN8 68 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 ADCYAP1P18509 176 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 SNRPD3P62318 126 aaKnown RBP7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 SOHLH1Q5JUK2 328 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 FAM24BQ8N5W8 94 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 MDFIQ99750 246 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 PARLQ9H300 379 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 ZNF705FA8MVS1 300 aaPredicted RBP7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 KRBOX1C9JBD0 128 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 CNN1P51911 297 aaKnown RBP7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 GOLT1AQ6ZVE7 132 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 ZNF738Q8NE65 137 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 LINC00052Q96N35 136 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 DERL1Q9BUN8 251 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 SEC11CQ9BY50 192 aa7.67□□□□□ -1.18
VIPAS39-201ENST00000327028 K7EQM0 130 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 RPL35P42766 123 aaKnown RBP7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 FAM74A3Q4VXF1 159 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 LINC00469Q8N7U9 141 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 SMIM7Q9BQ49 75 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 KLF12Q9Y4X4 402 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 IGKV2-40A0A087WW87 121 aaPredicted RBP7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 RBAKDNA6NC62 111 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 PRAC2D3DTV9 90 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 F8W036 122 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 IGKV2D-40P01614 121 aaPredicted RBP7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 S100A9P06702 114 aaKnown RBP7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 ZNF688P0C7X2 276 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 ZNF674Q2M3X9 581 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 C10orf91Q5T1B1 145 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 TMEM75Q8N9X5 138 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 FMC1Q96HJ9 113 aa7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 ZNF256Q9Y2P7 627 aaPredicted RBP7.66□□□□□ -1.18
VIPAS39-201ENST00000327028 GUCA2BQ16661 112 aa7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 TMEM183BQ1AE95 376 aa7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 PSMG4Q5JS54 123 aa7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 CARHSP1Q9Y2V2 147 aaKnown RBP7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 TRBV6-1A0A0K0K1D8 114 aa7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 FBLL1A6NHQ2 334 aaKnown RBP7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 ZNF727A8MUV8 499 aa7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 TAS2R60P59551 318 aa7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 UBE2G1P62253 170 aa7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 LINC00479Q96M42 142 aa7.65□□□□□ -1.18
VIPAS39-201ENST00000327028 TRAV34A0A0B4J273 112 aa7.65□□□□□ -1.19
VIPAS39-201ENST00000327028 C9JCJ5 164 aa7.65□□□□□ -1.19
VIPAS39-201ENST00000327028 WIPF1O43516 503 aa7.65□□□□□ -1.19
VIPAS39-201ENST00000327028 IGLV2-11P01706 119 aa7.65□□□□□ -1.19
VIPAS39-201ENST00000327028 Q86TA4 180 aa7.65□□□□□ -1.19
VIPAS39-201ENST00000327028 IGF2BP2-AS1Q96M15 143 aa7.65□□□□□ -1.19
VIPAS39-201ENST00000327028 GPR61Q9BZJ8 451 aa7.65□□□□□ -1.19
VIPAS39-201ENST00000327028 MAP6D1Q9H9H5 199 aa7.65□□□□□ -1.19
VIPAS39-201ENST00000327028 PRB4P10163 310 aaPredicted RBP7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 IGLL1P15814 213 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 BEAN1Q3B7T3 259 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 CENPWQ5EE01 88 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 NIPSNAP3BQ9BS92 247 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 TRBV20OR9-2A0A075B6H5 130 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 TRAV8-1A0A0A6YYK1 113 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 NPIPB6E9PJ23 425 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 FLI1Q01543 452 aaPredicted RBP7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 PRR31Q5SQ13 230 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 OR8A1Q8NGG7 326 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 VGLL1Q99990 258 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 NAT8Q9UHE5 227 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 PSG8Q9UQ74 426 aa7.64□□□□□ -1.19
VIPAS39-201ENST00000327028 LTAP01374 205 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms