RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 NDUFA4L2Q9NRX3 87 aa11.76□□□□□ -0.53
NUP98-201ENST00000324932 PRR25Q96S07 402 aa11.76□□□□□ -0.53
NUP98-201ENST00000324932 DSCR8Q96T75 97 aa11.76□□□□□ -0.53
NUP98-201ENST00000324932 DEFB130BP0DP73 79 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 DEFB130AP0DP74 79 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 TMEM14CQ9P0S9 112 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 GAGE5Q13069 117 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 GAGE6Q13070 117 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 J3QQQ9 107 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 SPACA3Q8IXA5 215 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 NTN5Q8WTR8 489 aaPredicted RBP11.75□□□□□ -0.53
NUP98-201ENST00000324932 TRIOBPQ9H2D6 2365 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 PIKFYVEQ9Y2I7 2098 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 KNCNA6PVL3 124 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 BRD3OSQ6XYD6 125 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 LTBP4Q8N2S1 1624 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 PYGO2Q9BRQ0 406 aa11.75□□□□□ -0.53
NUP98-201ENST00000324932 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
NUP98-201ENST00000324932 RBM3P98179 157 aaKnown RBP11.74□□□□□ -0.53
NUP98-201ENST00000324932 NKAPP1Q8N9T2 125 aa11.74□□□□□ -0.53
NUP98-201ENST00000324932 CDKN1BP46527 198 aa11.74□□□□□ -0.53
NUP98-201ENST00000324932 IGHV1OR15-1A0A075B7D0 117 aa11.74□□□□□ -0.53
NUP98-201ENST00000324932 CRYBA4P53673 196 aa11.74□□□□□ -0.53
NUP98-201ENST00000324932 C12orf74Q32Q52 190 aa11.74□□□□□ -0.53
NUP98-201ENST00000324932 OTOFQ9HC10 1997 aa11.74□□□□□ -0.53
NUP98-201ENST00000324932 SCRT2Q9NQ03 307 aa11.74□□□□□ -0.53
NUP98-201ENST00000324932 NPYP01303 97 aa11.73□□□□□ -0.53
NUP98-201ENST00000324932 C20orf78Q9BR46 151 aa11.73□□□□□ -0.53
NUP98-201ENST00000324932 KLHL30-AS1Q8NEE0 82 aa11.73□□□□□ -0.53
NUP98-201ENST00000324932 SIPA1L3O60292 1781 aaPredicted RBP11.73□□□□□ -0.53
NUP98-201ENST00000324932 SYNJ2BPP57105 145 aa11.73□□□□□ -0.53
NUP98-201ENST00000324932 LMO1P25800 156 aa11.73□□□□□ -0.53
NUP98-201ENST00000324932 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
NUP98-201ENST00000324932 C17orf82Q86X59 251 aaPredicted RBP11.73□□□□□ -0.53
NUP98-201ENST00000324932 TMEM243Q9BU79 118 aa11.73□□□□□ -0.53
NUP98-201ENST00000324932 ARFGEF1Q9Y6D6 1849 aa11.73□□□□□ -0.53
NUP98-201ENST00000324932 ABCA1O95477 2261 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 MBD3L4A6NDZ8 208 aaPredicted RBP11.72□□□□□ -0.53
NUP98-201ENST00000324932 MBD3L3A6NE82 208 aaPredicted RBP11.72□□□□□ -0.53
NUP98-201ENST00000324932 MBD3L5A6NJ08 208 aaPredicted RBP11.72□□□□□ -0.53
NUP98-201ENST00000324932 VWC2Q2TAL6 325 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 MBD3L2Q8NHZ7 208 aaPredicted RBP11.72□□□□□ -0.53
NUP98-201ENST00000324932 CEP250Q9BV73 2442 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 TRAV25A0A0B4J276 109 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 ANKRD36A6QL64 1941 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 K7ERJ3 54 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 PRDM6Q9NQX0 595 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 ACYP1P07311 99 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 SRSF2Q01130 221 aaKnown RBP11.72□□□□□ -0.53
NUP98-201ENST00000324932 KLF5Q13887 457 aaPredicted RBP11.72□□□□□ -0.53
NUP98-201ENST00000324932 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.72□□□□□ -0.53
NUP98-201ENST00000324932 IGLC7A0M8Q6 106 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 CEACAM8P31997 349 aaPredicted RBP11.72□□□□□ -0.53
NUP98-201ENST00000324932 GVINP1Q7Z2Y8 2422 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 HERVK_113P63121 156 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 HAPLN4Q86UW8 402 aa11.72□□□□□ -0.53
NUP98-201ENST00000324932 CFC1BP0CG36 223 aa11.71□□□□□ -0.53
NUP98-201ENST00000324932 CFC1P0CG37 223 aa11.71□□□□□ -0.53
NUP98-201ENST00000324932 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.53
NUP98-201ENST00000324932 B3GALT5-AS1P59052 145 aa11.71□□□□□ -0.53
NUP98-201ENST00000324932 LYPD2Q6UXB3 125 aa11.71□□□□□ -0.53
NUP98-201ENST00000324932 B5MCH6 92 aa11.71□□□□□ -0.54
NUP98-201ENST00000324932 H3BRN7 92 aa11.71□□□□□ -0.54
NUP98-201ENST00000324932 TRIP12Q14669 1992 aaPredicted RBP11.71□□□□□ -0.54
NUP98-201ENST00000324932 NXPH4O95158 308 aa11.71□□□□□ -0.54
NUP98-201ENST00000324932 SAA4P35542 130 aa11.7□□□□□ -0.54
NUP98-201ENST00000324932 NDUFS7O75251 213 aa11.7□□□□□ -0.54
NUP98-201ENST00000324932 SPINK13Q1W4C9 94 aa11.7□□□□□ -0.54
NUP98-201ENST00000324932 RALGAPA1Q6GYQ0 2036 aa11.7□□□□□ -0.54
NUP98-201ENST00000324932 ANXA2RQ3ZCQ2 193 aa11.7□□□□□ -0.54
NUP98-201ENST00000324932 MDS2Q8NDY4 140 aa11.7□□□□□ -0.54
NUP98-201ENST00000324932 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
NUP98-201ENST00000324932 TRAV26-2A0A0B4J265 109 aa11.7□□□□□ -0.54
NUP98-201ENST00000324932 DEFB125Q8N687 156 aa11.7□□□□□ -0.54
NUP98-201ENST00000324932 C8orf86Q6ZUL3 223 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 TDRD15B5MCY1 1934 aaKnown RBP11.69□□□□□ -0.54
NUP98-201ENST00000324932 ADAMTSL1Q8N6G6 1762 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 ATP6V0E1O15342 81 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.69□□□□□ -0.54
NUP98-201ENST00000324932 ZNRF2Q8NHG8 242 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 XCL2Q9UBD3 114 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 K7EM74 188 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 FHL1Q13642 323 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 KIR2DL5BA0A0G2JN68 375 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 KIR2DL5BA0A0G2JPC4 375 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 TINCRA0A1B0GVN0 87 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 KIR2DL5AQ8N109 375 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 ZNF747Q9BV97 191 aa11.69□□□□□ -0.54
NUP98-201ENST00000324932 INTS1Q8N201 2190 aaKnown RBP11.69□□□□□ -0.54
NUP98-201ENST00000324932 CCL25O15444 150 aa11.68□□□□□ -0.54
NUP98-201ENST00000324932 ZNF833PQ6ZTB9 187 aa11.68□□□□□ -0.54
NUP98-201ENST00000324932 KLK9Q9UKQ9 250 aa11.68□□□□□ -0.54
NUP98-201ENST00000324932 SPTBN1Q01082 2364 aaKnown RBP11.68□□□□□ -0.54
NUP98-201ENST00000324932 WIPF2Q8TF74 440 aaPredicted RBP11.68□□□□□ -0.54
NUP98-201ENST00000324932 C1orf147Q96MC9 270 aaPredicted RBP11.68□□□□□ -0.54
NUP98-201ENST00000324932 IGKV1-39P01597 117 aa11.68□□□□□ -0.54
NUP98-201ENST00000324932 IGKV1D-39P04432 117 aa11.68□□□□□ -0.54
NUP98-201ENST00000324932 K7EMI3 77 aa11.68□□□□□ -0.54
NUP98-201ENST00000324932 TUBGCP6Q96RT7 1819 aa11.68□□□□□ -0.54
NUP98-201ENST00000324932 Q0VFX4 171 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms