RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 PDE6HQ13956 83 aa12.03□□□□□ -0.48
LRRC42-201ENST00000319223 SPINK13Q1W4C9 94 aa12.03□□□□□ -0.48
LRRC42-201ENST00000319223 KCNRGQ8N5I3 272 aa12.03□□□□□ -0.48
LRRC42-201ENST00000319223 A0A1W2PPV4 95 aa12.02□□□□□ -0.49
LRRC42-201ENST00000319223 SERF2P84101 59 aa12.02□□□□□ -0.49
LRRC42-201ENST00000319223 ICAM4Q14773 271 aa12.02□□□□□ -0.49
LRRC42-201ENST00000319223 KHDC3LQ587J8 217 aa12.02□□□□□ -0.49
LRRC42-201ENST00000319223 ZFAND6Q6FIF0 208 aa12.02□□□□□ -0.49
LRRC42-201ENST00000319223 Q8NAQ8 132 aa12.02□□□□□ -0.49
LRRC42-201ENST00000319223 TAAR5O14804 337 aa12.01□□□□□ -0.49
LRRC42-201ENST00000319223 CRXO43186 299 aaPredicted RBP12.01□□□□□ -0.49
LRRC42-201ENST00000319223 RBMY1A1P0DJD3 496 aaKnown RBP12.01□□□□□ -0.49
LRRC42-201ENST00000319223 RBMY1CP0DJD4 496 aa12.01□□□□□ -0.49
LRRC42-201ENST00000319223 TAS2R45P59539 299 aa12.01□□□□□ -0.49
LRRC42-201ENST00000319223 UBE2L3P68036 154 aaKnown RBP12.01□□□□□ -0.49
LRRC42-201ENST00000319223 ZNF345Q14585 488 aa12.01□□□□□ -0.49
LRRC42-201ENST00000319223 RBMY1FQ15415 496 aaKnown RBP12.01□□□□□ -0.49
LRRC42-201ENST00000319223 C1orf158Q8N1D5 194 aa12.01□□□□□ -0.49
LRRC42-201ENST00000319223 GNPNAT1Q96EK6 184 aaPredicted RBP12.01□□□□□ -0.49
LRRC42-201ENST00000319223 IGHV4-28A0A0C4DH34 117 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 JTBO76095 146 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 ZNF705AQ6ZN79 300 aaPredicted RBP12□□□□□ -0.49
LRRC42-201ENST00000319223 SSX7Q7RTT5 188 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 ARPC5LQ9BPX5 153 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 TRAV12-2A0A075B6T6 113 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 IGHV3OR16-12A0A075B7B8 117 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 A0A1B0GVG6 124 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 C3orf84H3BNL1 204 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 CDC34P49427 236 aaPredicted RBP12□□□□□ -0.49
LRRC42-201ENST00000319223 RANP62826 216 aaKnown RBP12□□□□□ -0.49
LRRC42-201ENST00000319223 ERCC8Q13216 396 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 KIR3DS1Q14943 382 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 BAP18Q8IXM2 172 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 IL17DQ8TAD2 202 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 RAB24Q969Q5 203 aa12□□□□□ -0.49
LRRC42-201ENST00000319223 MRPL53Q96EL3 112 aaKnown RBP12□□□□□ -0.49
LRRC42-201ENST00000319223 BOLA2-SMG1P6H3BVE0 249 aa11.99□□□□□ -0.49
LRRC42-201ENST00000319223 CASC10Q5T4H9 136 aa11.99□□□□□ -0.49
LRRC42-201ENST00000319223 TCTE3Q8IZS6 198 aa11.99□□□□□ -0.49
LRRC42-201ENST00000319223 OR10J6PQ8NGY7 276 aa11.99□□□□□ -0.49
LRRC42-201ENST00000319223 IGF2BP2-AS1Q96M15 143 aa11.99□□□□□ -0.49
LRRC42-201ENST00000319223 PRELID1Q9Y255 219 aa11.99□□□□□ -0.49
LRRC42-201ENST00000319223 PRM2P04554 102 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 STAG3L2P0CL84 134 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 STAG3L3P0CL85 134 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 ARL14EPLP0DKL9 152 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 CT45A10P0DMU9 189 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 CD300CQ08708 224 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 ZNF726P1Q15940 193 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 PQLC2Q6ZP29 291 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 Q9H3A6 140 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 C11orf68Q9H3H3 251 aaKnown RBP11.98□□□□□ -0.49
LRRC42-201ENST00000319223 AAMDCQ9H7C9 122 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 PLA2G2EQ9NZK7 142 aa11.98□□□□□ -0.49
LRRC42-201ENST00000319223 A0A0D9SG52 128 aa11.97□□□□□ -0.49
LRRC42-201ENST00000319223 NPIPB6E9PJ23 425 aa11.97□□□□□ -0.49
LRRC42-201ENST00000319223 MBP02144 154 aa11.97□□□□□ -0.49
LRRC42-201ENST00000319223 MIFP14174 115 aa11.97□□□□□ -0.49
LRRC42-201ENST00000319223 PPP1R14DQ9NXH3 145 aa11.97□□□□□ -0.49
LRRC42-201ENST00000319223 IGKV2-40A0A087WW87 121 aaPredicted RBP11.97□□□□□ -0.49
LRRC42-201ENST00000319223 IGKV2D-40P01614 121 aaPredicted RBP11.97□□□□□ -0.49
LRRC42-201ENST00000319223 TMUB2Q71RG4 321 aa11.97□□□□□ -0.49
LRRC42-201ENST00000319223 CSMD3Q7Z407 3707 aa11.97□□□□□ -0.49
LRRC42-201ENST00000319223 BCL2L11O43521 198 aa11.96□□□□□ -0.49
LRRC42-201ENST00000319223 AMBPP02760 352 aa11.96□□□□□ -0.49
LRRC42-201ENST00000319223 LGALSLQ3ZCW2 172 aaPredicted RBP11.96□□□□□ -0.49
LRRC42-201ENST00000319223 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.49
LRRC42-201ENST00000319223 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.49
LRRC42-201ENST00000319223 GOLT1BQ9Y3E0 138 aa11.96□□□□□ -0.49
LRRC42-201ENST00000319223 CDKN1BP46527 198 aa11.95□□□□□ -0.5
LRRC42-201ENST00000319223 LYPD1Q8N2G4 141 aa11.95□□□□□ -0.5
LRRC42-201ENST00000319223 NEU1Q99519 415 aa11.95□□□□□ -0.5
LRRC42-201ENST00000319223 VGLL1Q99990 258 aa11.95□□□□□ -0.5
LRRC42-201ENST00000319223 ZNF471Q9BX82 626 aaPredicted RBP11.95□□□□□ -0.5
LRRC42-201ENST00000319223 KANTRA0A1W2PQU2 76 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 J3KRW8 73 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 INSP01308 110 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 GCHFRP30047 84 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 NANOS2P60321 138 aaKnown RBP11.94□□□□□ -0.5
LRRC42-201ENST00000319223 PMS2P11Q13670 270 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 PGPA6NDG6 321 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 C1QBP02746 253 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 AKR1C8PQ5T2L2 129 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 AKAP14Q86UN6 197 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 SUN5Q8TC36 379 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 HYLS1Q96M11 299 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 CELA1Q9UNI1 258 aa11.94□□□□□ -0.5
LRRC42-201ENST00000319223 ZNF705GA8MUZ8 300 aaPredicted RBP11.93□□□□□ -0.5
LRRC42-201ENST00000319223 FHITP49789 147 aa11.93□□□□□ -0.5
LRRC42-201ENST00000319223 GFI1BQ5VTD9 330 aa11.93□□□□□ -0.5
LRRC42-201ENST00000319223 C9orf47Q6ZRZ4 202 aa11.93□□□□□ -0.5
LRRC42-201ENST00000319223 C11orf45Q8TAV5 145 aa11.93□□□□□ -0.5
LRRC42-201ENST00000319223 FAM19A4Q96LR4 140 aa11.93□□□□□ -0.5
LRRC42-201ENST00000319223 LINC00477Q96M19 166 aa11.93□□□□□ -0.5
LRRC42-201ENST00000319223 TMEM208Q9BTX3 173 aa11.93□□□□□ -0.5
LRRC42-201ENST00000319223 STARD9Q9P2P6 4700 aa11.93□□□□□ -0.5
LRRC42-201ENST00000319223 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
LRRC42-201ENST00000319223 SMIM9A6NGZ8 99 aa11.92□□□□□ -0.5
LRRC42-201ENST00000319223 PFDN1O60925 122 aa11.92□□□□□ -0.5
LRRC42-201ENST00000319223 FGF8P55075 233 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms