RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PRR20EP86478 221 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 PRR20CP86479 221 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 PRR20DP86480 221 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 PRR20BP86481 221 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 PRR20AP86496 221 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 TTC32Q5I0X7 151 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 SPATA12Q7Z6I5 190 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 C17orf77Q96MU5 243 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 ANAPC13Q9BS18 74 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 CHODLQ9H9P2 273 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 SORL1Q92673 2214 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 TRAV8-2A0A0B4J237 113 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 TRAV40A0A0B4J280 105 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 A0A1W2PPM0 123 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 C2orf70A6NJV1 201 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 SRRM5B3KS81 715 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 TOMM40O96008 361 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 SPINK8P0C7L1 97 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 ATP5G2Q06055 141 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 WFDC2Q14508 124 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 CD300EQ496F6 205 aaPredicted RBP6.06□□□□□ -1.44
CDHR3-201ENST00000317716 C8orf49Q96NF6 230 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 TMEM133Q9H2Q1 129 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 IGHV1-18A0A0C4DH31 117 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 IGLC1P0CG04 106 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 FAM106CPP0CH98 169 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 ERVK11-1P61568 191 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 RBPJQ06330 500 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 FAM106AQ4KMX7 169 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 SPRNQ5BIV9 151 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 FLNCQ14315 2725 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 HCFC1P51610 2035 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 GAGE12HA6NDE8 117 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 IGKCP01834 107 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 CNTFRP26992 372 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 WT1-ASQ06250 92 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 FAM74A4Q5TZK3 123 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 TMEM158Q8WZ71 300 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 SOX21Q9Y651 276 aaPredicted RBP6.06□□□□□ -1.44
CDHR3-201ENST00000317716 MYO9AB2RTY4 2548 aa6.06□□□□□ -1.44
CDHR3-201ENST00000317716 H3BRM9 83 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 IGKV3-20P01619 116 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 CEACAM3P40198 252 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 LOXL1Q08397 574 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-201ENST00000317716 DAZAP2Q15038 168 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-201ENST00000317716 FAM120AOSQ5T036 256 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 RPRMLQ8N4K4 120 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 GEMIN7Q9H840 131 aaKnown RBP6.05□□□□□ -1.44
CDHR3-201ENST00000317716 TMEM14BQ9NUH8 114 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 NUP210LQ5VU65 1888 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 USP9XQ93008 2570 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-201ENST00000317716 PROP1O75360 226 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 DPM2O94777 84 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 Q86TA4 180 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 OR9G4Q8NGQ1 327 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 GLMPQ8WWB7 406 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 SCGB3A1Q96QR1 104 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 SLC25A39Q9BZJ4 359 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-201ENST00000317716 NGBQ9NPG2 151 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 OTORQ9NRC9 128 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 PGPEP1Q9NXJ5 209 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 ADGRG4Q8IZF6 3080 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 CFAP46Q8IYW2 2715 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 A0A1W2PPI3 338 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 GATA1P15976 413 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-201ENST00000317716 BMI1P35226 326 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 FXYD2P54710 66 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 LINC00322Q6ZN03 302 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-201ENST00000317716 SYT8Q8NBV8 401 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 GTSF1Q8WW33 167 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 CLUHP3Q96NS8 147 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 ZNF747Q9BV97 191 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 SIGLEC8Q9NYZ4 499 aa6.05□□□□□ -1.44
CDHR3-201ENST00000317716 C15orf65H3BRN8 121 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 DLX6P56179 175 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 TMEM78Q5T7P6 136 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 SLC25A48Q6ZT89 311 aaKnown RBP6.04□□□□□ -1.44
CDHR3-201ENST00000317716 ZNF503Q96F45 646 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 IGHV4-39P01824 125 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 Q8N976 141 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 MRPL36Q9P0J6 103 aaKnown RBP6.04□□□□□ -1.44
CDHR3-201ENST00000317716 TRAV26-2A0A0B4J265 109 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 TMEM8BA6NDV4 472 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 ZNF815PA8K554 130 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 NPYP01303 97 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 MC5RP33032 325 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 RPL13AP40429 203 aaKnown RBP6.04□□□□□ -1.44
CDHR3-201ENST00000317716 RASL11AQ6T310 242 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 FXYD5Q96DB9 178 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 RNF125Q96EQ8 232 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 SCRT2Q9NQ03 307 aa6.04□□□□□ -1.44
CDHR3-201ENST00000317716 TMEM238LA0A1B0GVL6 79 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 A6NJY4 79 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 E7EUB6 86 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 SH2D1AO60880 128 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 PAX1P15863 534 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 NPC2P61916 151 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 LYRM7Q5U5X0 104 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 ATP6V0BQ99437 205 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 SS18L2Q9UHA2 77 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms