RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 LEPROTL1O95214 131 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 CD24P25063 80 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 SLC35B1P78383 322 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 MIC13Q5XKP0 118 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 NHLRC2Q8NBF2 726 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 AJUBAQ96IF1 538 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 FBXL15Q9H469 300 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 VPS13CQ709C8 3753 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.32□□□□□ -0.76
CPNE1-201ENST00000317677 TCL1AP56279 114 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 GDF5OSQ5U4N7 250 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 LINC01545Q5VT33 79 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 CCDC144NLQ6NUI1 221 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 SPCS1Q9Y6A9 102 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 IGHV4-61A0A0C4DH41 118 aa10.31□□□□□ -0.76
CPNE1-201ENST00000317677 TEX48A0A1B0GUV7 120 aa10.31□□□□□ -0.76
CPNE1-201ENST00000317677 VWC2LB2RUY7 222 aa10.31□□□□□ -0.76
CPNE1-201ENST00000317677 TSPAN13O95857 204 aa10.31□□□□□ -0.76
CPNE1-201ENST00000317677 C10orf105Q8TEF2 133 aa10.31□□□□□ -0.76
CPNE1-201ENST00000317677 ZC2HC1AQ96GY0 325 aa10.31□□□□□ -0.76
CPNE1-201ENST00000317677 OTOGQ6ZRI0 2925 aa10.31□□□□□ -0.76
CPNE1-201ENST00000317677 F8P00451 2351 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 IGHV1-24A0A0C4DH33 117 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 OR11H12B2RN74 326 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 FNDC10F2Z333 226 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 MFAP2P55001 183 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 CD69Q07108 199 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 FXYD3Q14802 87 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 KIR3DS1Q14943 382 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 OR11H1Q8NG94 326 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 OR11H2Q8NH07 326 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 SSMEM1Q8WWF3 244 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 TMEM167BQ9NRX6 74 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 THYN1Q9P016 225 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 TEX22C9J3V5 150 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 ZNF207O43670 478 aaKnown RBP10.3□□□□□ -0.76
CPNE1-201ENST00000317677 FABP2P12104 132 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 ATP5IP56385 69 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-201ENST00000317677 RPL24P83731 157 aaKnown RBP10.3□□□□□ -0.76
CPNE1-201ENST00000317677 ERHP84090 104 aaKnown RBP10.3□□□□□ -0.76
CPNE1-201ENST00000317677 RUSC1-AS1Q66K80 236 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 PVRIGQ6DKI7 326 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 TEPPQ6URK8 271 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 PPP1R27Q86WC6 154 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 IGF2BP2-AS1Q96M15 143 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
CPNE1-201ENST00000317677 HSPB8Q9UJY1 196 aa10.3□□□□□ -0.76
CPNE1-201ENST00000317677 TEP1Q99973 2627 aaKnown RBP10.29□□□□□ -0.76
CPNE1-201ENST00000317677 SVEP1Q4LDE5 3571 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 IGHV4-30-2A0A087WSY4 118 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 A0A1B0GXF2 115 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 APELAP0DMC3 54 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 FGF6P10767 208 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 RPL27AP46776 148 aaKnown RBP10.29□□□□□ -0.76
CPNE1-201ENST00000317677 PRR20EP86478 221 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 PRR20CP86479 221 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 PRR20DP86480 221 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 PRR20BP86481 221 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 PRR20AP86496 221 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 OR9G4Q8NGQ1 327 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 FAM168AQ92567 244 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 PERPQ96FX8 193 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 RNF5Q99942 180 aa10.29□□□□□ -0.76
CPNE1-201ENST00000317677 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
CPNE1-201ENST00000317677 STPG3Q8N7X2 389 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 NUP35Q8NFH5 326 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 OR4X2Q8NGF9 303 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 PGPEP1Q9NXJ5 209 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 SIGLEC8Q9NYZ4 499 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 AKAP9Q99996 3911 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 K7EQM0 130 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 NDUFA3O95167 84 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 IGHV3-48P01763 117 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 ATP5J2P56134 94 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 LINC00173Q6ZV60 143 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 Q8N6K4 173 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 PIMREGQ9BSJ6 248 aa10.28□□□□□ -0.76
CPNE1-201ENST00000317677 GEMIN7Q9H840 131 aaKnown RBP10.28□□□□□ -0.76
CPNE1-201ENST00000317677 F8W1H4 67 aa10.27□□□□□ -0.77
CPNE1-201ENST00000317677 FOXH1O75593 365 aa10.27□□□□□ -0.77
CPNE1-201ENST00000317677 MINOS1Q5TGZ0 78 aa10.27□□□□□ -0.77
CPNE1-201ENST00000317677 SPATA31B1PQ5VZV4 182 aa10.27□□□□□ -0.77
CPNE1-201ENST00000317677 BOD1L2Q8IYS8 172 aa10.27□□□□□ -0.77
CPNE1-201ENST00000317677 NPBQ8NG41 125 aa10.27□□□□□ -0.77
CPNE1-201ENST00000317677 ZNF479Q96JC4 524 aa10.27□□□□□ -0.77
CPNE1-201ENST00000317677 SERTAD4Q9NUC0 356 aa10.27□□□□□ -0.77
CPNE1-201ENST00000317677 MINOS1-NBL1R4GNA1 71 aa10.27□□□□□ -0.77
CPNE1-201ENST00000317677 A0A1W2PRE2 83 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 NBR2O15453 112 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 MOSP00540 346 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 UBE2E1P51965 193 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 SRSF12Q8WXF0 261 aaKnown RBP10.26□□□□□ -0.77
CPNE1-201ENST00000317677 MRPL16Q9NX20 251 aaKnown RBP10.26□□□□□ -0.77
CPNE1-201ENST00000317677 CSMD2Q7Z408 3487 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 IGKV1D-37A0A075B6S9 117 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 MGST1P10620 155 aaKnown RBP10.26□□□□□ -0.77
CPNE1-201ENST00000317677 PAX8Q06710 450 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 EBI3Q14213 229 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms