RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 DLX1P56177 255 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 TWIST1Q15672 202 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 LY6G5BQ8NDX9 201 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 OR11H6Q8NGC7 330 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 PIFOQ8TCI5 191 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 SH3BGRL2Q9UJC5 107 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 CHTOPQ9Y3Y2 248 aaKnown RBP10.85□□□□□ -0.67
MKS1-201ENST00000313863 SNAI2O43623 268 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 FAM106CPP0CH98 169 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 PAX8Q06710 450 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 LOXL1Q08397 574 aaPredicted RBP10.85□□□□□ -0.67
MKS1-201ENST00000313863 C5orf64Q2M2E5 130 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 FAM106AQ4KMX7 169 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 ASCL2Q99929 193 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 C21orf62Q9NYP8 219 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 UQCRFS1P47985 274 aa10.84□□□□□ -0.67
MKS1-201ENST00000313863 CFHR4Q92496 578 aa10.84□□□□□ -0.67
MKS1-201ENST00000313863 LINC01546A6NGU7 62 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 IGLC6P0CF74 106 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 PRB3Q04118 309 aaPredicted RBP10.83□□□□□ -0.68
MKS1-201ENST00000313863 UFSP1Q6NVU6 142 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 ZNF562Q6V9R5 426 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 TTC9CQ8N5M4 171 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 ARPC1AQ92747 370 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 NXT2Q9NPJ8 142 aaKnown RBP10.83□□□□□ -0.68
MKS1-201ENST00000313863 K7EP34 96 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 NDUFS7O75251 213 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 KIR3DS1Q14943 382 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 PIP4P2Q8N4L2 257 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 OR5A1Q8NGJ0 315 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 FANCD2OSQ96PS1 177 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 ZFHX4Q86UP3 3567 aa10.83□□□□□ -0.68
MKS1-201ENST00000313863 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
MKS1-201ENST00000313863 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.82□□□□□ -0.68
MKS1-201ENST00000313863 M0R1W7 72 aa10.82□□□□□ -0.68
MKS1-201ENST00000313863 NPYP01303 97 aa10.82□□□□□ -0.68
MKS1-201ENST00000313863 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
MKS1-201ENST00000313863 EGR2P11161 476 aaPredicted RBP10.82□□□□□ -0.68
MKS1-201ENST00000313863 HES1Q14469 280 aa10.82□□□□□ -0.68
MKS1-201ENST00000313863 CCDC144NLQ6NUI1 221 aa10.82□□□□□ -0.68
MKS1-201ENST00000313863 ADAMTSL5Q6ZMM2 481 aa10.82□□□□□ -0.68
MKS1-201ENST00000313863 CNFNQ9BYD5 112 aa10.82□□□□□ -0.68
MKS1-201ENST00000313863 A0A0G2JLM5 398 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 FABP5P3A8MUU1 101 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 RAB9AP51151 201 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 SMPXQ9UHP9 88 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 HILPDAQ9Y5L2 63 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 MAP1BP46821 2468 aaKnown RBP10.81□□□□□ -0.68
MKS1-201ENST00000313863 OOSP1A8MZH6 123 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 TMEM238C9JI98 176 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 LYNX1G3V0Z9 82 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 LYNX1P0DP58 116 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 FCER1GP30273 86 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 KLF17Q5JT82 389 aaPredicted RBP10.81□□□□□ -0.68
MKS1-201ENST00000313863 OR2K2Q8NGT1 345 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 ABHD17AQ96GS6 310 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 TIMD4Q96H15 378 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 HIGD1BQ9P298 99 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 POLEQ07864 2286 aa10.81□□□□□ -0.68
MKS1-201ENST00000313863 ZNF318Q5VUA4 2279 aa10.8□□□□□ -0.68
MKS1-201ENST00000313863 H3BUT2 72 aa10.8□□□□□ -0.68
MKS1-201ENST00000313863 NMUP48645 174 aa10.8□□□□□ -0.68
MKS1-201ENST00000313863 ZNF672Q499Z4 452 aaPredicted RBP10.8□□□□□ -0.68
MKS1-201ENST00000313863 ORM1P02763 201 aa10.8□□□□□ -0.68
MKS1-201ENST00000313863 RBAKDNA6NC62 111 aa10.79□□□□□ -0.68
MKS1-201ENST00000313863 ODF3BA8MYP8 253 aa10.79□□□□□ -0.68
MKS1-201ENST00000313863 F8W735 103 aaPredicted RBP10.79□□□□□ -0.68
MKS1-201ENST00000313863 VKORC1Q9BQB6 163 aa10.79□□□□□ -0.68
MKS1-201ENST00000313863 S4R3C0 116 aa10.79□□□□□ -0.68
MKS1-201ENST00000313863 SMKR1H3BMG3 65 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 ATP5LO75964 103 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 SMIM13P0DJ93 91 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 PRTN3P24158 256 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 FOXE3Q13461 319 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 Q8NA96 180 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 ZMAT4Q9H898 229 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 A0A1W2PPM0 123 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 FABP2P12104 132 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 HLA-DRB4P13762 266 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 LEPP41159 167 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 BCL6BQ8N143 479 aaPredicted RBP10.78□□□□□ -0.68
MKS1-201ENST00000313863 RNF185Q96GF1 192 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 VGLL1Q99990 258 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 HLA-DRB4X5D2U9 266 aa10.78□□□□□ -0.68
MKS1-201ENST00000313863 CFAP47Q6ZTR5 3102 aa10.77□□□□□ -0.68
MKS1-201ENST00000313863 ZNF80P51504 273 aaPredicted RBP10.77□□□□□ -0.69
MKS1-201ENST00000313863 Q8TAT8 98 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 JMJD8Q96S16 334 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 MEGF9Q9H1U4 602 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 DKK2Q9UBU2 259 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 NCBP2LA6PVI3 153 aaKnown RBP10.77□□□□□ -0.69
MKS1-201ENST00000313863 CIDEAO60543 219 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 TNFRSF6BO95407 300 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 CTSGP08311 255 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 PRSS57Q6UWY2 283 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 C1orf122Q6ZSJ8 110 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 SLC50A1Q9BRV3 221 aa10.77□□□□□ -0.69
MKS1-201ENST00000313863 SPCS1Q9Y6A9 102 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms