RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TSPAN13O95857 204 aa2.59□□□□□ -2
CLOCK-201ENST00000309964 CTSBP07858 339 aa2.59□□□□□ -2
CLOCK-201ENST00000309964 TMEM249Q2WGJ8 235 aa2.59□□□□□ -2
CLOCK-201ENST00000309964 NMSQ5H8A3 153 aa2.59□□□□□ -2
CLOCK-201ENST00000309964 TCTEX1D4Q5JR98 221 aa2.59□□□□□ -2
CLOCK-201ENST00000309964 ACTL10Q5JWF8 245 aa2.59□□□□□ -2
CLOCK-201ENST00000309964 CARHSP1Q9Y2V2 147 aaKnown RBP2.59□□□□□ -2
CLOCK-201ENST00000309964 PKD1L2Q7Z442 2459 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 IGKV1D-43A0A0B4J1Z2 117 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 CCL25O15444 150 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 IFITM3Q01628 133 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 TRBV24-1A0A075B6N3 115 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 IGHV3OR16-10A0A075B7F0 116 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 IGKV3OR2-268A0A0C4DH90 116 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 POU2AF1Q16633 256 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 GAFA1Q96PS6 74 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 AGMATQ9BSE5 352 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 IGKV1-9A0A0C4DH69 117 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 SLC17A3O00476 420 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 RNASE1P07998 156 aaKnown RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 C1QTNF9P0C862 333 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 INAFM2P0DMQ5 153 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 TCF15Q12870 199 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 DAZ2Q13117 558 aaKnown RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 Q6ZVH6 145 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 DAZ4Q86SG3 579 aaKnown RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 ZNF114Q8NC26 417 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 WFDC12Q8WWY7 111 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 ZNF837Q96EG3 531 aaPredicted RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 KLK15Q9H2R5 256 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 DAZ3Q9NR90 486 aaKnown RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 C5orf30Q96GV9 206 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 IGHV3-35A0A0C4DH35 117 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 A0A1B0GVG6 124 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 F8VVB4 439 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 F8VWA3 439 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 SPART-AS1P0CW21 52 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 ATXN8Q156A1 80 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 MESP1Q9BRJ9 268 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 PNRC2Q9NPJ4 139 aaKnown RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 PRRC2CQ9Y520 2896 aaKnown RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 TRBV20-1A0A075B6N2 111 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 I3L3M4 83 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 AZU1P20160 251 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 Q0VFX4 171 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 MRPL23Q16540 153 aaKnown RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 NRTNQ99748 197 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 SPANXB1Q9NS25 103 aaPredicted RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 IGKCP01834 107 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 RPL32P62910 135 aaKnown RBP2.58□□□□□ -2
CLOCK-201ENST00000309964 C16orf54Q6UWD8 224 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 C10orf126Q8N4M7 172 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 Q8NFD4 153 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 VOPP1Q96AW1 172 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 NDUFA4L2Q9NRX3 87 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 NKAPP1Q8N9T2 125 aa2.58□□□□□ -2
CLOCK-201ENST00000309964 IGKV1D-17A0A075B6S4 117 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 HGFACQ04756 655 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 IL15RAQ13261 267 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 Q6P435 159 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 MRPL52Q86TS9 123 aaKnown RBP2.57□□□□□ -2
CLOCK-201ENST00000309964 AJUBAQ96IF1 538 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 POLQO75417 2590 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 PAX2Q02962 417 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 LOXL1Q08397 574 aaPredicted RBP2.57□□□□□ -2
CLOCK-201ENST00000309964 PRSS33Q8NF86 280 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 H7C2G1 150 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 LDLRAD4O15165 306 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 FCN3O75636 299 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 TCRAP04437 139 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 ADMP35318 185 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 IFI27L1Q96BM0 104 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 GRIFINA4D1Z8 144 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 LINC00158P58513 81 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 HERVK_113P63121 156 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 C4orf48Q5BLP8 95 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 CD177Q8N6Q3 437 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 KIR2DL5BQ8NHK3 375 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 SMIM9A6NGZ8 99 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 F5H768 121 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 PAX4O43316 350 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 SYNJ2BPP57105 145 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 C20orf78Q9BR46 151 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 SHANK2-AS3Q9BTD1 123 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 ERG28Q9UKR5 140 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 C1QL1O75973 258 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 MST1P26927 711 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 CXCL5P42830 114 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 VWC2Q2TAL6 325 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 TMEM219Q86XT9 240 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 C9JQL5 133 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 FOXL2P58012 376 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 MIR17HGQ75NE6 70 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 THAP8Q8NA92 274 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 SCO2A0A1W2PP80 73 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 LINC01548A6NM66 108 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 K7EMT4 169 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 SRP19P09132 144 aaKnown RBP2.57□□□□□ -2
CLOCK-201ENST00000309964 HERV-K104P63124 156 aa2.57□□□□□ -2
CLOCK-201ENST00000309964 C16orf74Q96GX8 76 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms