RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 HLA-DRB4X5D2U9 266 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 PRKDCP78527 4128 aaKnown RBP9.49□□□□□ -0.89
APTX-201ENST00000309615 A0A0J9YX75 114 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 PRAC2D3DTV9 90 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 RAB5CP51148 216 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 EBLN2Q6P2I7 272 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 SBSPONQ8IVN8 264 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 SUN5Q8TC36 379 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 SFT2D1Q8WV19 159 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 ASCL2Q99929 193 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 Q9H3A6 140 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
APTX-201ENST00000309615 A0A1B0GV50 99 aa9.48□□□□□ -0.89
APTX-201ENST00000309615 IGKV3-20P01619 116 aa9.48□□□□□ -0.89
APTX-201ENST00000309615 HAGHQ16775 308 aa9.48□□□□□ -0.89
APTX-201ENST00000309615 OR4B1Q8NGF8 309 aa9.48□□□□□ -0.89
APTX-201ENST00000309615 MBD3L1Q8WWY6 194 aa9.48□□□□□ -0.89
APTX-201ENST00000309615 B9D2Q9BPU9 175 aa9.48□□□□□ -0.89
APTX-201ENST00000309615 TMEM167BQ9NRX6 74 aa9.48□□□□□ -0.89
APTX-201ENST00000309615 H2AFB1P0C5Y9 115 aa9.47□□□□□ -0.89
APTX-201ENST00000309615 LYPD1Q8N2G4 141 aa9.47□□□□□ -0.89
APTX-201ENST00000309615 OR8A1Q8NGG7 326 aa9.47□□□□□ -0.89
APTX-201ENST00000309615 AGRNO00468 2067 aa9.47□□□□□ -0.89
APTX-201ENST00000309615 CNN1P51911 297 aaKnown RBP9.47□□□□□ -0.89
APTX-201ENST00000309615 HIST1H1AQ02539 215 aaPredicted RBP9.47□□□□□ -0.89
APTX-201ENST00000309615 MRPL53Q96EL3 112 aaKnown RBP9.47□□□□□ -0.89
APTX-201ENST00000309615 OTORQ9NRC9 128 aa9.47□□□□□ -0.89
APTX-201ENST00000309615 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.9
APTX-201ENST00000309615 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.9
APTX-201ENST00000309615 PGPA6NDG6 321 aa9.46□□□□□ -0.9
APTX-201ENST00000309615 APOC4P55056 127 aa9.46□□□□□ -0.9
APTX-201ENST00000309615 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.9
APTX-201ENST00000309615 KIR2DL5BQ8NHK3 375 aa9.46□□□□□ -0.9
APTX-201ENST00000309615 CSTL1Q9H114 145 aa9.46□□□□□ -0.9
APTX-201ENST00000309615 PRELID1Q9Y255 219 aa9.46□□□□□ -0.9
APTX-201ENST00000309615 ZNF705EA8MWA4 302 aaPredicted RBP9.45□□□□□ -0.9
APTX-201ENST00000309615 GIG44P09565 113 aaPredicted RBP9.45□□□□□ -0.9
APTX-201ENST00000309615 UBE2G2P60604 165 aa9.45□□□□□ -0.9
APTX-201ENST00000309615 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
APTX-201ENST00000309615 GGTLC3B5MD39 225 aa9.45□□□□□ -0.9
APTX-201ENST00000309615 DUSP14O95147 198 aaKnown RBP9.45□□□□□ -0.9
APTX-201ENST00000309615 CA1P00915 261 aaPredicted RBP9.45□□□□□ -0.9
APTX-201ENST00000309615 CCL20P78556 96 aa9.45□□□□□ -0.9
APTX-201ENST00000309615 OR10J6PQ8NGY7 276 aa9.45□□□□□ -0.9
APTX-201ENST00000309615 IGKV2-40A0A087WW87 121 aaPredicted RBP9.44□□□□□ -0.9
APTX-201ENST00000309615 A0A1W2PRE2 83 aa9.44□□□□□ -0.9
APTX-201ENST00000309615 A8MTW9 85 aa9.44□□□□□ -0.9
APTX-201ENST00000309615 IGKV2D-40P01614 121 aaPredicted RBP9.44□□□□□ -0.9
APTX-201ENST00000309615 CSN1S1P47710 185 aa9.44□□□□□ -0.9
APTX-201ENST00000309615 FXYD7P58549 80 aa9.44□□□□□ -0.9
APTX-201ENST00000309615 SUMO1P63165 101 aaKnown RBP9.44□□□□□ -0.9
APTX-201ENST00000309615 AMTNQ6UX39 209 aa9.44□□□□□ -0.9
APTX-201ENST00000309615 CLUHP3Q96NS8 147 aa9.44□□□□□ -0.9
APTX-201ENST00000309615 SLC35B3Q9H1N7 401 aa9.44□□□□□ -0.9
APTX-201ENST00000309615 TRAV1-1A0A0B4J248 108 aa9.43□□□□□ -0.9
APTX-201ENST00000309615 FAM74A7A6NL05 159 aa9.43□□□□□ -0.9
APTX-201ENST00000309615 ERCC8Q13216 396 aa9.43□□□□□ -0.9
APTX-201ENST00000309615 MORN3Q6PF18 240 aaPredicted RBP9.43□□□□□ -0.9
APTX-201ENST00000309615 TEX261Q6UWH6 196 aa9.43□□□□□ -0.9
APTX-201ENST00000309615 CMTM2Q8TAZ6 248 aa9.43□□□□□ -0.9
APTX-201ENST00000309615 RXFP4Q8TDU9 374 aa9.43□□□□□ -0.9
APTX-201ENST00000309615 TM2D3Q9BRN9 247 aa9.43□□□□□ -0.9
APTX-201ENST00000309615 RETNQ9HD89 108 aa9.43□□□□□ -0.9
APTX-201ENST00000309615 RPH3ALQ9UNE2 315 aa9.43□□□□□ -0.9
APTX-201ENST00000309615 DIRC3C9JPN6 131 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 NPIPB6E9PJ23 425 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 UBE2CO00762 179 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 SLC25A5P05141 298 aaKnown RBP9.42□□□□□ -0.9
APTX-201ENST00000309615 NUTF2P61970 127 aaKnown RBP9.42□□□□□ -0.9
APTX-201ENST00000309615 GNG5P63218 68 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 DEFB135Q30KP9 77 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 VGLL1Q99990 258 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 AGPAT4-IT1Q9H0P7 198 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 XCL2Q9UBD3 114 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 PAGE4O60829 102 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 C5orf17Q8NAS9 161 aa9.42□□□□□ -0.9
APTX-201ENST00000309615 TEX46H3BTG2 121 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 M0R2Z0 102 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 HBE1P02100 147 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 CT45A10P0DMU9 189 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 SPINK13Q1W4C9 94 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 CST9LP1Q5W188 147 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 C9orf47Q6ZRZ4 202 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 Q6ZWC4 215 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 ZNF680Q8NEM1 530 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 PPP1R14DQ9NXH3 145 aa9.41□□□□□ -0.9
APTX-201ENST00000309615 ATP5G3P48201 142 aa9.4□□□□□ -0.9
APTX-201ENST00000309615 GOLT1AQ6ZVE7 132 aa9.4□□□□□ -0.9
APTX-201ENST00000309615 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
APTX-201ENST00000309615 NKX6-2Q9C056 277 aaPredicted RBP9.4□□□□□ -0.9
APTX-201ENST00000309615 GNG13Q9P2W3 67 aa9.4□□□□□ -0.9
APTX-201ENST00000309615 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
APTX-201ENST00000309615 DNAH9Q9NYC9 4486 aa9.4□□□□□ -0.9
APTX-201ENST00000309615 RBAKDNA6NC62 111 aa9.4□□□□□ -0.91
APTX-201ENST00000309615 TCRAP04437 139 aa9.4□□□□□ -0.91
APTX-201ENST00000309615 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.91
APTX-201ENST00000309615 BLOC1S1P78537 153 aa9.4□□□□□ -0.91
APTX-201ENST00000309615 CCDC28AQ8IWP9 274 aa9.4□□□□□ -0.91
APTX-201ENST00000309615 ARL6IP6Q8N6S5 226 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms