RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 MMP23AO75900 390 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 LINC01559Q495D7 138 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 ZNF664Q8N3J9 261 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 FANCMQ8IYD8 2048 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 ZNF134P52741 427 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 CFHR3Q02985 330 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 JPT2Q9H910 190 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 STPG4Q8N801 248 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 PLXNA4Q9HCM2 1894 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 SPINK13Q1W4C9 94 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 GFRA4Q9GZZ7 299 aa14.91□□□□□ -0.02
UBXN2A-201ENST00000309033 RASL10AQ92737 203 aa14.9□□□□□ -0.02
UBXN2A-201ENST00000309033 IGHV1-69DA0A0B4J2H0 117 aa14.9□□□□□ -0.02
UBXN2A-201ENST00000309033 IGHV1-69P01742 117 aa14.9□□□□□ -0.02
UBXN2A-201ENST00000309033 XCL2Q9UBD3 114 aa14.9□□□□□ -0.02
UBXN2A-201ENST00000309033 PDE6HQ13956 83 aa14.9□□□□□ -0.02
UBXN2A-201ENST00000309033 Q5PR19 223 aa14.9□□□□□ -0.02
UBXN2A-201ENST00000309033 IGHV3-16A0A0C4DH30 117 aa14.89□□□□□ -0.03
UBXN2A-201ENST00000309033 HAPLN4Q86UW8 402 aa14.89□□□□□ -0.03
UBXN2A-201ENST00000309033 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.89□□□□□ -0.03
UBXN2A-201ENST00000309033 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.89□□□□□ -0.03
UBXN2A-201ENST00000309033 IGHV2-70DA0A0C4DH43 119 aa14.89□□□□□ -0.03
UBXN2A-201ENST00000309033 C15orf65H3BRN8 121 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 SSC4DQ8WTU2 575 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 TRBV19A0A075B6N1 114 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 CEACAM8P31997 349 aaPredicted RBP14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 C6orf226Q5I0X4 101 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 IGFL3Q6UXB1 125 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 E9PQ18 207 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 NDUFS8O00217 210 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 RNF166Q96A37 237 aaPredicted RBP14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 Q96MF0 132 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 KIR3DS1Q14943 382 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 SIGMAR1Q99720 223 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 DOCK8Q8NF50 2099 aa14.88□□□□□ -0.03
UBXN2A-201ENST00000309033 IGLV3-9A0A075B6K5 115 aa14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 TRAV26-2A0A0B4J265 109 aa14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 TIMM21Q9BVV7 248 aa14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 WT1-ASQ06250 92 aa14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 YPEL3P61236 119 aaPredicted RBP14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 PFN1P07737 140 aaKnown RBP14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 FAM215AQ9Y5M1 114 aa14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 PI4KAP42356 2102 aa14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 PLA2G2CQ5R387 149 aa14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 ANAPC13Q9BS18 74 aa14.87□□□□□ -0.03
UBXN2A-201ENST00000309033 GHRHP01286 108 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 ESDP10768 282 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 FAM120AOSQ5T036 256 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 COL6A6A6NMZ7 2263 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 PLXNA2O75051 1894 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 CHAC1Q9BUX1 264 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 TRAV12-2A0A075B6T6 113 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 C1QTNF4Q9BXJ3 329 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 C18orf32Q8TCD1 76 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 ZNF492Q9P255 531 aa14.86□□□□□ -0.03
UBXN2A-201ENST00000309033 TP53TG1Q9Y2A0 90 aa14.85□□□□□ -0.03
UBXN2A-201ENST00000309033 SSBP2P81877 361 aaPredicted RBP14.85□□□□□ -0.03
UBXN2A-201ENST00000309033 TEX36Q5VZQ5 186 aa14.85□□□□□ -0.03
UBXN2A-201ENST00000309033 C8orf86Q6ZUL3 223 aa14.85□□□□□ -0.03
UBXN2A-201ENST00000309033 LINC01619G3V211 115 aa14.85□□□□□ -0.03
UBXN2A-201ENST00000309033 WIPF3A6NGB9 483 aa14.85□□□□□ -0.03
UBXN2A-201ENST00000309033 IGLV1-44P01699 117 aa14.85□□□□□ -0.03
UBXN2A-201ENST00000309033 ZNF625Q96I27 306 aaPredicted RBP14.85□□□□□ -0.03
UBXN2A-201ENST00000309033 C1orf122Q6ZSJ8 110 aa14.84□□□□□ -0.03
UBXN2A-201ENST00000309033 POLR3KQ9Y2Y1 108 aaPredicted RBP14.84□□□□□ -0.03
UBXN2A-201ENST00000309033 ZNF114Q8NC26 417 aa14.84□□□□□ -0.03
UBXN2A-201ENST00000309033 TRPT1Q86TN4 253 aaKnown RBP14.84□□□□□ -0.03
UBXN2A-201ENST00000309033 GAGE12JA6NER3 117 aa14.84□□□□□ -0.03
UBXN2A-201ENST00000309033 GAGE1Q13065 139 aa14.84□□□□□ -0.03
UBXN2A-201ENST00000309033 GAGE4Q13068 117 aa14.84□□□□□ -0.03
UBXN2A-201ENST00000309033 GAGE5Q13069 117 aa14.84□□□□□ -0.03
UBXN2A-201ENST00000309033 DTX1Q86Y01 620 aa14.84□□□□□ -0.03
UBXN2A-201ENST00000309033 PRSS46E5RG02 174 aa14.83□□□□□ -0.03
UBXN2A-201ENST00000309033 PRIMA1Q86XR5 153 aa14.83□□□□□ -0.03
UBXN2A-201ENST00000309033 PLXND1Q9Y4D7 1925 aa14.83□□□□□ -0.03
UBXN2A-201ENST00000309033 DLEU1O43261 78 aa14.83□□□□□ -0.04
UBXN2A-201ENST00000309033 NDUFS6O75380 124 aaKnown RBP14.83□□□□□ -0.04
UBXN2A-201ENST00000309033 Q71RC1 249 aaPredicted RBP14.83□□□□□ -0.04
UBXN2A-201ENST00000309033 Q0VG73 95 aa14.83□□□□□ -0.04
UBXN2A-201ENST00000309033 KIAA1671Q9BY89 1806 aa14.83□□□□□ -0.04
UBXN2A-201ENST00000309033 TRAV8-3A0A0A6YYJ7 113 aa14.83□□□□□ -0.04
UBXN2A-201ENST00000309033 LY6G5BQ8NDX9 201 aa14.83□□□□□ -0.04
UBXN2A-201ENST00000309033 IGFBPL1Q8WX77 278 aa14.83□□□□□ -0.04
UBXN2A-201ENST00000309033 LAMTOR3Q9UHA4 124 aa14.83□□□□□ -0.04
UBXN2A-201ENST00000309033 ROS1P08922 2347 aa14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 MYMXA0A1B0GTQ4 84 aa14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 FAM104BQ5XKR9 115 aa14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 C2orf82Q6UX34 121 aa14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 H3BRN7 92 aa14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 SPTBN1Q01082 2364 aaKnown RBP14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 LEPROTO15243 131 aa14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 SLAQ13239 276 aa14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 NEGR1Q7Z3B1 354 aa14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 RNF114Q9Y508 228 aa14.82□□□□□ -0.04
UBXN2A-201ENST00000309033 ACACAQ13085 2346 aa14.81□□□□□ -0.04
UBXN2A-201ENST00000309033 V9GYV3 84 aa14.81□□□□□ -0.04
UBXN2A-201ENST00000309033 EREGO14944 169 aa14.81□□□□□ -0.04
UBXN2A-201ENST00000309033 HEATR5AQ86XA9 2040 aa14.81□□□□□ -0.04
UBXN2A-201ENST00000309033 ZNF124Q15973 351 aa14.81□□□□□ -0.04
UBXN2A-201ENST00000309033 PSCAO43653 123 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms