RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 OR11H2Q8NH07 326 aa8.04□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 FXYD5Q96DB9 178 aa8.04□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 SLC35B3Q9H1N7 401 aa8.04□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 A8MTW9 85 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ZNF705FA8MVS1 300 aaPredicted RBP8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 BOLA2-SMG1P6H3BVE0 249 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 NDUFB4O95168 129 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ARL14EPLP0DKL9 152 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 CSN1S1P47710 185 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 ICAM4Q14773 271 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 FAM74A1Q5RGS3 127 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 TMUB2Q71RG4 321 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 LYPD1Q8N2G4 141 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 EXOC3-AS1Q8N2X6 119 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 RAB24Q969Q5 203 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 PHYHIPLQ96FC7 376 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 HYLS1Q96M11 299 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 CYTL1Q9NRR1 136 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 GOLT1BQ9Y3E0 138 aa8.03□□□□□ -1.12
CSPG4P1Y-201ENST00000306641 IGHV3OR16-12A0A075B7B8 117 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 CTXND1A0A1B0GTU2 59 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 M0R3E3 92 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 EIF3GO75821 320 aaKnown RBP eCLIP8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 CXorf1O96002 111 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 INSP01308 110 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 GIG44P09565 113 aaPredicted RBP8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 STAG3L2P0CL84 134 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 STAG3L3P0CL85 134 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 PRB4P10163 310 aaPredicted RBP8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TPT1P13693 172 aaKnown RBP8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 RANP62826 216 aaKnown RBP8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 SPINK13Q1W4C9 94 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 ZFP69Q49AA0 526 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 RPP25LQ8N5L8 163 aaKnown RBP8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 CMTM2Q8TAZ6 248 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 Q9H3A6 140 aa8.02□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 M0R2Z0 102 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 SEC11BP0C7V7 166 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 MIFP14174 115 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TSPOP30536 169 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 LEPP41159 167 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 CDKN1BP46527 198 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 AMTNQ6UX39 209 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 BAP18Q8IXM2 172 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 IGF2BP2-AS1Q96M15 143 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TMEM208Q9BTX3 173 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 EDA2RQ9HAV5 297 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TMEM167BQ9NRX6 74 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 RPH3ALQ9UNE2 315 aa8.01□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TGP01266 2768 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 DNAH9Q9NYC9 4486 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 A0A1B0GVG6 124 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 ZNF705EA8MWA4 302 aaPredicted RBP8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 UMAD1C9J7I0 102 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 PRAC2D3DTV9 90 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 NPIPB6E9PJ23 425 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 GCHFRP30047 84 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TMEM78Q5T7P6 136 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 EIF5AL1Q6IS14 154 aaKnown RBP8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 CSNK1G2-AS1Q8NCQ2 148 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 IL17DQ8TAD2 202 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 STOML3Q8TAV4 291 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 MUC7Q8TAX7 377 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 RXFP4Q8TDU9 374 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 C11orf68Q9H3H3 251 aaKnown RBP8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 OTORQ9NRC9 128 aa8□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 IGKV2-40A0A087WW87 121 aaPredicted RBP7.99□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 MAP1LC3B2A6NCE7 125 aa7.99□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 PGPA6NDG6 321 aa7.99□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 IGKV2D-40P01614 121 aaPredicted RBP7.99□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 LGALSLQ3ZCW2 172 aaPredicted RBP7.99□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 ODF3Q96PU9 254 aa7.99□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 MAP1LC3BQ9GZQ8 125 aa7.99□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 COL7A1Q02388 2944 aa7.99□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TRAV12-2A0A075B6T6 113 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 IGHV4-28A0A0C4DH34 117 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 C3orf84H3BNL1 204 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 J3KRW8 73 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 HBE1P02100 147 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 SLC25A5P05141 298 aaKnown RBP7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 DPPA3Q6W0C5 159 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 ZNF705AQ6ZN79 300 aaPredicted RBP7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 SSX7Q7RTT5 188 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 SLC51BQ86UW2 128 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TMEM256Q8N2U0 113 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 Q8NAQ8 132 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 FAM213BQ8TBF2 198 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TMED6Q8WW62 240 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 LINC00477Q96M19 166 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 NEU1Q99519 415 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 X6R8D5 127 aa7.98□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 TMEM189A5PLL7 270 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 RBAKDNA6NC62 111 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 SMIM9A6NGZ8 99 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 DIRC3C9JPN6 131 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 DEFB4AO15263 64 aa7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 FGF8P55075 233 aaPredicted RBP7.97□□□□□ -1.13
CSPG4P1Y-201ENST00000306641 CD300CQ08708 224 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms