RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
DDX54-201ENST00000306014 LHBP01229 141 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 ZC2HC1AQ96GY0 325 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 ZNF479Q96JC4 524 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 JMJD8Q96S16 334 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 IGLC1P0CG04 106 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 WT1P19544 449 aaPredicted RBP10.61□□□□□ -0.71
DDX54-201ENST00000306014 CLEC2AQ6UVW9 174 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 PATE2Q6UY27 113 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 VMO1Q7Z5L0 202 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 BEX4Q9NWD9 120 aaPredicted RBP10.61□□□□□ -0.71
DDX54-201ENST00000306014 WIPF2Q8TF74 440 aaPredicted RBP10.61□□□□□ -0.71
DDX54-201ENST00000306014 DEFB104AQ8WTQ1 72 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 TMEM158Q8WZ71 300 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 SMAD7O15105 426 aaKnown RBP10.61□□□□□ -0.71
DDX54-201ENST00000306014 UTF1Q5T230 341 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 FAM167A-AS1Q96KT0 104 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 C17orf77Q96MU5 243 aa10.61□□□□□ -0.71
DDX54-201ENST00000306014 MKI67P46013 3256 aaKnown RBP10.6□□□□□ -0.71
DDX54-201ENST00000306014 LAMA2P24043 3122 aaKnown RBP10.6□□□□□ -0.71
DDX54-201ENST00000306014 HAX1O00165 279 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 ERCC8Q13216 396 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 MSMPQ1L6U9 139 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 FAM104BQ5XKR9 115 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 LINC00173Q6ZV60 143 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 TMEM75Q8N9X5 138 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 DKK4Q9UBT3 224 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 PTPRQQ9UMZ3 2332 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 IGLC7A0M8Q6 106 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 OCIAD2Q56VL3 154 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 LINC00311Q8N616 119 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 THBDP07204 575 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 NDPQ00604 133 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 IGF2BP2-AS1Q96M15 143 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 SPRY4Q9C004 299 aa10.6□□□□□ -0.71
DDX54-201ENST00000306014 ZNF256Q9Y2P7 627 aaPredicted RBP10.6□□□□□ -0.71
DDX54-201ENST00000306014 LAGE3Q14657 143 aa10.59□□□□□ -0.71
DDX54-201ENST00000306014 SAMD13Q5VXD3 122 aa10.59□□□□□ -0.71
DDX54-201ENST00000306014 PRSS57Q6UWY2 283 aa10.59□□□□□ -0.71
DDX54-201ENST00000306014 LTAP01374 205 aa10.59□□□□□ -0.71
DDX54-201ENST00000306014 COX6B1P14854 86 aa10.59□□□□□ -0.71
DDX54-201ENST00000306014 PDE6HQ13956 83 aa10.59□□□□□ -0.71
DDX54-201ENST00000306014 E7EUB6 86 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 CCL25O15444 150 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 CEACAM8P31997 349 aaPredicted RBP10.58□□□□□ -0.72
DDX54-201ENST00000306014 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.72
DDX54-201ENST00000306014 BVES-AS1Q5T3Y7 98 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 PPP1R17O96001 155 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 CEACAM4O75871 244 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 C3orf36Q3SXR2 165 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 TMEM219Q86XT9 240 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 SIGLEC8Q9NYZ4 499 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 CTSZQ9UBR2 303 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 CHTOPQ9Y3Y2 248 aaKnown RBP10.58□□□□□ -0.72
DDX54-201ENST00000306014 C5orf42Q9H799 3197 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 COX8AP10176 69 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 PRR30Q53SZ7 412 aaPredicted RBP10.58□□□□□ -0.72
DDX54-201ENST00000306014 SMPXQ9UHP9 88 aa10.58□□□□□ -0.72
DDX54-201ENST00000306014 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 ZNF815PA8K554 130 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 MRPL51Q4U2R6 128 aaKnown RBP10.57□□□□□ -0.72
DDX54-201ENST00000306014 ORMDL2Q53FV1 153 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 TMEM190Q8WZ59 177 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 HCFC1P51610 2035 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 LAMA3Q16787 3333 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 LRP4O75096 1905 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 C22orf46C9J442 243 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 NDUFB8O95169 186 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 SRD5A1P18405 259 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 PAX8Q06710 450 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 CD300EQ496F6 205 aaPredicted RBP10.57□□□□□ -0.72
DDX54-201ENST00000306014 RNF182Q8N6D2 247 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 RITA1Q96K30 269 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 MRPL36Q9P0J6 103 aaKnown RBP10.57□□□□□ -0.72
DDX54-201ENST00000306014 PIEZO2Q9H5I5 2752 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 ESDP10768 282 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 ATP5J2P56134 94 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 SIGLEC15Q6ZMC9 328 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 ZNF503Q96F45 646 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 TMEM14CQ9P0S9 112 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 A0A0C4DFX4 3053 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 CEP295Q9C0D2 2601 aa10.57□□□□□ -0.72
DDX54-201ENST00000306014 IGFL3Q6UXB1 125 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 RANBP2P49792 3224 aaKnown RBP10.56□□□□□ -0.72
DDX54-201ENST00000306014 COX6CP09669 75 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 PRSS46E5RG02 174 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 CD7P09564 240 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 PRR25Q96S07 402 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 CYSLTR1Q9Y271 337 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 DYSFO75923 2080 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 NOTCH2Q04721 2471 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 SNRPD3P62318 126 aaKnown RBP10.56□□□□□ -0.72
DDX54-201ENST00000306014 FAM120AOSQ5T036 256 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 DYNLRB2Q8TF09 96 aa10.56□□□□□ -0.72
DDX54-201ENST00000306014 SRSF8Q9BRL6 282 aaKnown RBP10.56□□□□□ -0.72
DDX54-201ENST00000306014 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms