RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 SYNJ2BPP57105 145 aa13.05□□□□□ -0.32
BRD3-201ENST00000303407 LHBP01229 141 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 MALP21145 153 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 FAM231DQ6ZW35 169 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 ZNF479Q96JC4 524 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 IGHV2-5P01817 119 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 PRR20EP86478 221 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 PRR20CP86479 221 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 PRR20DP86480 221 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 PRR20BP86481 221 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 PRR20AP86496 221 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 FAM120AOSQ5T036 256 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 CTSZQ9UBR2 303 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 NBL1P41271 181 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 BCL6BQ8N143 479 aaPredicted RBP13.04□□□□□ -0.32
BRD3-201ENST00000303407 KIAA2026Q5HYC2 2103 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 A0A1B0GV72 72 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 RBMY1BA6NDE4 496 aaKnown RBP13.04□□□□□ -0.32
BRD3-201ENST00000303407 RBMY1EA6NEQ0 496 aaKnown RBP13.04□□□□□ -0.32
BRD3-201ENST00000303407 RBMY1DP0C7P1 496 aaKnown RBP13.04□□□□□ -0.32
BRD3-201ENST00000303407 RBMY1A1P0DJD3 496 aaKnown RBP13.04□□□□□ -0.32
BRD3-201ENST00000303407 RBMY1CP0DJD4 496 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 SLAQ13239 276 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 RNF223E7ERA6 249 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 CMC4P56277 68 aaPredicted RBP13.04□□□□□ -0.32
BRD3-201ENST00000303407 MPV17L2Q567V2 206 aa13.04□□□□□ -0.32
BRD3-201ENST00000303407 NAA38Q9BRA0 125 aaKnown RBP13.03□□□□□ -0.32
BRD3-201ENST00000303407 COL4A4P53420 1690 aaPredicted RBP13.03□□□□□ -0.32
BRD3-201ENST00000303407 C8orf31Q8N9H6 132 aa13.03□□□□□ -0.32
BRD3-201ENST00000303407 C11orf52Q96A22 123 aa13.03□□□□□ -0.32
BRD3-201ENST00000303407 TRGV1A0A0A0MS02 117 aa13.03□□□□□ -0.32
BRD3-201ENST00000303407 K7EN84 100 aa13.03□□□□□ -0.32
BRD3-201ENST00000303407 MRPL52Q86TS9 123 aaKnown RBP13.02□□□□□ -0.32
BRD3-201ENST00000303407 TPRP12270 2363 aaKnown RBP13.02□□□□□ -0.32
BRD3-201ENST00000303407 IGLC1P0CG04 106 aa13.02□□□□□ -0.32
BRD3-201ENST00000303407 GATA3P23771 443 aa13.02□□□□□ -0.32
BRD3-201ENST00000303407 SP5Q6BEB4 398 aaPredicted RBP13.02□□□□□ -0.32
BRD3-201ENST00000303407 A8MWP6 167 aa13.02□□□□□ -0.33
BRD3-201ENST00000303407 C8orf86Q6ZUL3 223 aa13.02□□□□□ -0.33
BRD3-201ENST00000303407 MEGF9Q9H1U4 602 aa13.02□□□□□ -0.33
BRD3-201ENST00000303407 HEATR1Q9H583 2144 aaKnown RBP13.02□□□□□ -0.33
BRD3-201ENST00000303407 FAM104BQ5XKR9 115 aa13.02□□□□□ -0.33
BRD3-201ENST00000303407 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.33
BRD3-201ENST00000303407 CHCHD5Q9BSY4 110 aa13.02□□□□□ -0.33
BRD3-201ENST00000303407 YLPM1P49750 1951 aaKnown RBP13.02□□□□□ -0.33
BRD3-201ENST00000303407 PAX2Q02962 417 aa13.02□□□□□ -0.33
BRD3-201ENST00000303407 INSP01308 110 aa13.01□□□□□ -0.33
BRD3-201ENST00000303407 RPL35AP18077 110 aaKnown RBP13.01□□□□□ -0.33
BRD3-201ENST00000303407 DKK4Q9UBT3 224 aa13.01□□□□□ -0.33
BRD3-201ENST00000303407 A0A1W2PNU3 283 aaPredicted RBP13.01□□□□□ -0.33
BRD3-201ENST00000303407 IGHV3-53P01767 116 aa13.01□□□□□ -0.33
BRD3-201ENST00000303407 IGHV2-70P01814 119 aa13.01□□□□□ -0.33
BRD3-201ENST00000303407 EREGO14944 169 aa13.01□□□□□ -0.33
BRD3-201ENST00000303407 TEX43Q6ZNM6 134 aa13.01□□□□□ -0.33
BRD3-201ENST00000303407 Q6ZWC4 215 aa13.01□□□□□ -0.33
BRD3-201ENST00000303407 ZC2HC1AQ96GY0 325 aa13.01□□□□□ -0.33
BRD3-201ENST00000303407 SLX1AQ9BQ83 275 aa13.01□□□□□ -0.33
BRD3-201ENST00000303407 HOXB4P17483 251 aaPredicted RBP13□□□□□ -0.33
BRD3-201ENST00000303407 DLEU1O43261 78 aa13□□□□□ -0.33
BRD3-201ENST00000303407 NDUFS6O75380 124 aaKnown RBP13□□□□□ -0.33
BRD3-201ENST00000303407 GRNP28799 593 aaKnown RBP13□□□□□ -0.33
BRD3-201ENST00000303407 TDGF1P3P51864 188 aa13□□□□□ -0.33
BRD3-201ENST00000303407 NPC2P61916 151 aa13□□□□□ -0.33
BRD3-201ENST00000303407 PRADC1Q9BSG0 188 aa13□□□□□ -0.33
BRD3-201ENST00000303407 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
BRD3-201ENST00000303407 A0A0U1RRA0 63 aa13□□□□□ -0.33
BRD3-201ENST00000303407 PRR25Q96S07 402 aa13□□□□□ -0.33
BRD3-201ENST00000303407 ESPL1Q14674 2120 aa12.99□□□□□ -0.33
BRD3-201ENST00000303407 C22orf46C9J442 243 aa12.99□□□□□ -0.33
BRD3-201ENST00000303407 TMEM238C9JI98 176 aa12.99□□□□□ -0.33
BRD3-201ENST00000303407 UBE2E2Q96LR5 201 aa12.99□□□□□ -0.33
BRD3-201ENST00000303407 IGLC7A0M8Q6 106 aa12.99□□□□□ -0.33
BRD3-201ENST00000303407 ZC2HC1BQ5TFG8 222 aa12.99□□□□□ -0.33
BRD3-201ENST00000303407 STPG4Q8N801 248 aa12.99□□□□□ -0.33
BRD3-201ENST00000303407 PLEKHB2Q96CS7 222 aa12.99□□□□□ -0.33
BRD3-201ENST00000303407 MRPL51Q4U2R6 128 aaKnown RBP12.98□□□□□ -0.33
BRD3-201ENST00000303407 TRAV8-2A0A0B4J237 113 aa12.98□□□□□ -0.33
BRD3-201ENST00000303407 IGHV1-24A0A0C4DH33 117 aa12.98□□□□□ -0.33
BRD3-201ENST00000303407 IGF2-ASQ6U949 168 aa12.98□□□□□ -0.33
BRD3-201ENST00000303407 RPL36AP83881 106 aaKnown RBP12.98□□□□□ -0.33
BRD3-201ENST00000303407 RPL36ALQ969Q0 106 aaKnown RBP12.98□□□□□ -0.33
BRD3-201ENST00000303407 LTAP01374 205 aa12.98□□□□□ -0.33
BRD3-201ENST00000303407 DEFB131AP59861 70 aa12.98□□□□□ -0.33
BRD3-201ENST00000303407 C20orf144Q9BQM9 153 aa12.98□□□□□ -0.33
BRD3-201ENST00000303407 NDUFA4O00483 81 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 TMEM131Q92545 1883 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 Q5PR19 223 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 C10orf126Q8N4M7 172 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 SPRY4Q9C004 299 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 ERG28Q9UKR5 140 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 GAGE13Q4V321 117 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 ICE1Q9Y2F5 2266 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 KIR3DS1Q14943 382 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 Q8N8P6 123 aa12.97□□□□□ -0.33
BRD3-201ENST00000303407 DPH3Q96FX2 82 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 C17orf77Q96MU5 243 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 CHAC1Q9BUX1 264 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 TRAV26-2A0A0B4J265 109 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 M0R2P5 195 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 RIPPLY3P57055 190 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms