RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 OR2D3Q8NGH3 330 aa14.93□□□□□ -0.02
HOXC4-201ENST00000303406 TP53TG3Q9ULZ0 132 aa14.93□□□□□ -0.02
HOXC4-201ENST00000303406 PAFAH1B2P68402 229 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 Q6ZS46 218 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 TCF24Q7RTU0 167 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 KRTAP1-3Q8IUG1 177 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 GLMPQ8WWB7 406 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 SPG11Q96JI7 2443 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 PRR25Q96S07 402 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 CR1P17927 2039 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 JOSD1Q15040 202 aaPredicted RBP14.92□□□□□ -0.02
HOXC4-201ENST00000303406 CYB5R2Q6BCY4 276 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 TMEM256Q8N2U0 113 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 VPREB3Q9UKI3 123 aa14.92□□□□□ -0.02
HOXC4-201ENST00000303406 IGKV2-40A0A087WW87 121 aaPredicted RBP14.91□□□□□ -0.02
HOXC4-201ENST00000303406 GRIFINA4D1Z8 144 aa14.91□□□□□ -0.02
HOXC4-201ENST00000303406 IGKV2D-40P01614 121 aaPredicted RBP14.91□□□□□ -0.02
HOXC4-201ENST00000303406 APOHP02749 345 aaPredicted RBP14.91□□□□□ -0.02
HOXC4-201ENST00000303406 CRIP1P50238 77 aa14.91□□□□□ -0.02
HOXC4-201ENST00000303406 SRSF2Q01130 221 aaKnown RBP14.91□□□□□ -0.02
HOXC4-201ENST00000303406 GDF5OSQ5U4N7 250 aa14.91□□□□□ -0.02
HOXC4-201ENST00000303406 MAPK1IP1LQ8NDC0 245 aa14.91□□□□□ -0.02
HOXC4-201ENST00000303406 OR4X2Q8NGF9 303 aa14.91□□□□□ -0.02
HOXC4-201ENST00000303406 Q96MF0 132 aa14.91□□□□□ -0.02
HOXC4-201ENST00000303406 KLK15Q9H2R5 256 aa14.91□□□□□ -0.02
HOXC4-201ENST00000303406 PRRC2AP48634 2157 aaKnown RBP14.9□□□□□ -0.02
HOXC4-201ENST00000303406 A0A1B0GW15 77 aa14.9□□□□□ -0.02
HOXC4-201ENST00000303406 A0A1W2PS18 150 aa14.9□□□□□ -0.02
HOXC4-201ENST00000303406 A8MWP6 167 aa14.9□□□□□ -0.02
HOXC4-201ENST00000303406 BAGE3Q86Y29 109 aa14.9□□□□□ -0.02
HOXC4-201ENST00000303406 TEX29Q8N6K0 151 aa14.9□□□□□ -0.02
HOXC4-201ENST00000303406 GATD1Q8NB37 220 aa14.9□□□□□ -0.02
HOXC4-201ENST00000303406 NDFIP1Q9BT67 221 aa14.9□□□□□ -0.02
HOXC4-201ENST00000303406 PSMB8P28062 276 aa14.89□□□□□ -0.03
HOXC4-201ENST00000303406 LINC00310P59036 64 aa14.89□□□□□ -0.03
HOXC4-201ENST00000303406 SLAQ13239 276 aa14.89□□□□□ -0.03
HOXC4-201ENST00000303406 FAM162BQ5T6X4 162 aa14.89□□□□□ -0.03
HOXC4-201ENST00000303406 Q71RC1 249 aaPredicted RBP14.89□□□□□ -0.03
HOXC4-201ENST00000303406 PGLYRP4Q96LB8 373 aa14.89□□□□□ -0.03
HOXC4-201ENST00000303406 C8orf49Q96NF6 230 aa14.89□□□□□ -0.03
HOXC4-201ENST00000303406 TRAV8-2A0A0B4J237 113 aa14.88□□□□□ -0.03
HOXC4-201ENST00000303406 PCP4L1A6NKN8 68 aa14.88□□□□□ -0.03
HOXC4-201ENST00000303406 TRBV12-3P01733 135 aa14.88□□□□□ -0.03
HOXC4-201ENST00000303406 BMI1P35226 326 aa14.88□□□□□ -0.03
HOXC4-201ENST00000303406 RPS20P60866 119 aaKnown RBP14.88□□□□□ -0.03
HOXC4-201ENST00000303406 KLF5Q13887 457 aaPredicted RBP14.88□□□□□ -0.03
HOXC4-201ENST00000303406 C8orf86Q6ZUL3 223 aa14.88□□□□□ -0.03
HOXC4-201ENST00000303406 NPFFR1Q9GZQ6 430 aa14.88□□□□□ -0.03
HOXC4-201ENST00000303406 PPP1R14DQ9NXH3 145 aa14.88□□□□□ -0.03
HOXC4-201ENST00000303406 FAM208BQ5VWN6 2430 aa14.88□□□□□ -0.03
HOXC4-201ENST00000303406 SERF1AO75920 110 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 PLA2G2AP14555 144 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 HLA-DMBP28068 263 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 SRIP30626 198 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 VGLL1Q99990 258 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 IGHV3-66A0A0C4DH42 116 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 A0A1B0GUS0 222 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 K7EMT4 169 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 ZNF207O43670 478 aaKnown RBP14.87□□□□□ -0.03
HOXC4-201ENST00000303406 NUPR1O60356 82 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 SH2D1AO60880 128 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 RIGQ13278 110 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 KIAA1644Q3SXP7 199 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 UNQ9165/PRO28630Q6UXU0 137 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 GSN-AS1Q9NRJ2 163 aa14.87□□□□□ -0.03
HOXC4-201ENST00000303406 PEF1Q9UBV8 284 aaKnown RBP14.87□□□□□ -0.03
HOXC4-201ENST00000303406 ANKRD17O75179 2603 aaKnown RBP14.86□□□□□ -0.03
HOXC4-201ENST00000303406 ASH1LQ9NR48 2969 aaKnown RBP14.86□□□□□ -0.03
HOXC4-201ENST00000303406 A0A1B0GUT8 65 aa14.86□□□□□ -0.03
HOXC4-201ENST00000303406 ZNF705FA8MVS1 300 aaPredicted RBP14.86□□□□□ -0.03
HOXC4-201ENST00000303406 J3QKU1 62 aa14.86□□□□□ -0.03
HOXC4-201ENST00000303406 IGHV3-11P01762 117 aa14.86□□□□□ -0.03
HOXC4-201ENST00000303406 CAMPP49913 170 aa14.86□□□□□ -0.03
HOXC4-201ENST00000303406 TMEM189A5PLL7 270 aa14.85□□□□□ -0.03
HOXC4-201ENST00000303406 IGFL4Q6B9Z1 124 aa14.85□□□□□ -0.03
HOXC4-201ENST00000303406 LRRK2Q5S007 2527 aa14.85□□□□□ -0.03
HOXC4-201ENST00000303406 GZMBP10144 247 aa14.84□□□□□ -0.03
HOXC4-201ENST00000303406 C9orf47Q6ZRZ4 202 aa14.84□□□□□ -0.03
HOXC4-201ENST00000303406 GPHB5Q86YW7 130 aa14.84□□□□□ -0.03
HOXC4-201ENST00000303406 KCNS1Q96KK3 526 aa14.84□□□□□ -0.03
HOXC4-201ENST00000303406 PSMG3-AS1Q96PY0 264 aa14.84□□□□□ -0.03
HOXC4-201ENST00000303406 ALKBH7Q9BT30 221 aaPredicted RBP14.84□□□□□ -0.03
HOXC4-201ENST00000303406 FBN2P35556 2912 aa14.84□□□□□ -0.03
HOXC4-201ENST00000303406 IGHV3OR16-13A0A075B7E8 117 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 IGHV3-49A0A0A0MS15 119 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 IGHV3-74A0A0B4J1X5 117 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 IGHV7-4-1A0A0J9YVY3 117 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 PRAC2D3DTV9 90 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 SMAD7O15105 426 aaKnown RBP14.83□□□□□ -0.04
HOXC4-201ENST00000303406 ELANEP08246 267 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 FOXE3Q13461 319 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 C18orf32Q8TCD1 76 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 BORCS7Q96B45 105 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 ASCL2Q99929 193 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 EPG5Q9HCE0 2579 aa14.83□□□□□ -0.04
HOXC4-201ENST00000303406 TMEM95Q3KNT9 176 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 FAM106AQ4KMX7 169 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 DMRTA1Q5VZB9 504 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 RNF182Q8N6D2 247 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 MYOZ3Q8TDC0 251 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms